BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0073.p (58 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll4886 Non COG 66 2e-11 RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 57 9e-09 >mll4886 Non COG Length = 241 Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 27/49 (55%), Positives = 38/49 (77%) Query: 10 SIIMIEHNMSVVMDISDNITVMNRGTVLAQGGPDDIRGNKSVQEAYFGS 58 ++++IEHNM VVM ++D ITV N G +LA+G P+ IR N +VQEAY G+ Sbjct: 191 TVLLIEHNMPVVMQLADRITVFNAGKILAEGTPEAIRENAAVQEAYLGT 239 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats. Identities = 25/49 (51%), Positives = 36/49 (73%) Query: 10 SIIMIEHNMSVVMDISDNITVMNRGTVLAQGGPDDIRGNKSVQEAYFGS 58 +I+M+EHNM+VV I+D ITV+ RG +LA+G +D+ N V EAY G+ Sbjct: 200 TILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNPQVMEAYMGT 248