BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0037.p (261 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_ssuB [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 219 6e-57 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 211 9e-55 MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 210 3e-54 PA0184 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 209 7e-54 CAC0107 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 205 6e-53 >BS_ssuB [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Bsu Bacillus subtilis Length = 274 Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 18 LERFSAEIAPGEIIAIIGGSGCGKSTLLRAIAGLDRASTGSVTLDNAVITSPHAKIGIIF 77 LE IAPGE + +IG SGCGKSTLL+ IAGLD GSV ++ +T+P + G IF Sbjct: 41 LENIELSIAPGEFLTLIGPSGCGKSTLLKIIAGLDSEYDGSVEINGRSVTAPGIQQGFIF 100 Query: 78 QEPRLLPWLSVADNIGFGLTDLPAEARRARVASALARVGLADKAAAWPRELSGGQAQRVA 137 QE RL PWL+V NI L +L + +V + V L A+PRELSGG +QRVA Sbjct: 101 QEHRLFPWLTVEQNIAADL-NLKDPKVKQKVDELIEIVRLKGSEKAYPRELSGGMSQRVA 159 Query: 138 IARALVPQPEVLLLDEPFSALDAFTRRDLQDHLLDLWADTRPTLILVTHDVDEAVVLADR 197 I RAL+ +PEVLLLDEPF ALDAFTR+ LQD LLD+W + T+ILVTHD+DE+V L + Sbjct: 160 ITRALLREPEVLLLDEPFGALDAFTRKHLQDVLLDIWRKKKTTMILVTHDIDESVYLGNE 219 Query: 198 VLVMRPRPGRLFEEITINLARPRDRKSELFDTFTRRVLTALDRSLD 243 + +++ +PG++ + + I+LA PR+R + F +RVL+ +++ D Sbjct: 220 LAILKAKPGKIHKLMPIHLAYPRNRTTPDFQAIRQRVLSEFEKTED 265 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 111/245 (45%), Positives = 149/245 (60%), Gaps = 7/245 (2%) Query: 2 LALKDVGKTYP-----NGVHALERFSAEIAPGEIIAIIGGSGCGKSTLLRAIAGLDRAST 56 +++K+V + + +G AL S ++ GE I ++G SGCGK+TLLR AGL+ ++ Sbjct: 18 VSVKNVSRVFSKKEDESGTEALHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLETLTS 77 Query: 57 GSVTLDNAVITSPHAKIGIIFQEPRLLPWLSVADNIGFGL--TDLPAEARRARVASALAR 114 G +TL+ IT P K G++FQ+ L PW +V DNI FGL + R +V L Sbjct: 78 GEITLNGVPITGPDPKRGMVFQQYSLFPWRTVIDNITFGLEMQGIKKSEARKQVEKYLEL 137 Query: 115 VGLADKAAAWPRELSGGQAQRVAIARALVPQPEVLLLDEPFSALDAFTRRDLQDHLLDLW 174 VGL ++P ELSGG QR AIARAL +PEVLL+DEPF ALDA TR LQD LL +W Sbjct: 138 VGLGQFKNSYPHELSGGMQQRAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELLKIW 197 Query: 175 ADTRPTLILVTHDVDEAVVLADRVLVMRPRPGRLFEEITINLARPRDRKSELFDTFTRRV 234 T + VTH VDEAV L+DR++VM RPGR+ E +++ L RPR R S + V Sbjct: 198 EQKHVTFLFVTHSVDEAVFLSDRIVVMTSRPGRVKEIVSVELPRPRSRTSPEVNRLRDHV 257 Query: 235 LTALD 239 L L+ Sbjct: 258 LKLLE 262 >MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mja Methanococcus jannaschii Length = 267 Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 106/237 (44%), Positives = 147/237 (62%), Gaps = 2/237 (0%) Query: 13 NGVHALERFSAEIAPGEIIAIIGGSGCGKSTLLRAIAGLDRASTGSVTLDNAVITSPHAK 72 N V AL+ + E+ E + ++G SGCGK+TLLR IAGLD + G V LD + P A Sbjct: 31 NRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPTEGKVLLDGKEVKGPGAD 90 Query: 73 IGIIFQEPRLLPWLSVADNIGFGL--TDLPAEARRARVASALARVGLADKAAAWPRELSG 130 G++FQ+ L+PW +V N+ FGL +P R + VGL A+P +LSG Sbjct: 91 RGVVFQQYTLMPWRTVLKNVTFGLELKGIPKNERIEIAKKFIKMVGLEGFEDAYPYQLSG 150 Query: 131 GQAQRVAIARALVPQPEVLLLDEPFSALDAFTRRDLQDHLLDLWADTRPTLILVTHDVDE 190 G QRVAIAR L PE++L+DEPF+ALDA TR LQ+ LL +W + T+ VTH VDE Sbjct: 151 GMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLKIWQKEKKTVFFVTHSVDE 210 Query: 191 AVVLADRVLVMRPRPGRLFEEITINLARPRDRKSELFDTFTRRVLTALDRSLDRSVR 247 AV L+DRV+V+ RPGR+ E + I+L RPRDR S F + +++L L + +S++ Sbjct: 211 AVYLSDRVVVLTARPGRIKEIVKIDLERPRDRTSIEFLEYRKKILNILKDEVLKSLK 267 >PA0184 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 279 Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 113/221 (51%), Positives = 144/221 (65%), Gaps = 4/221 (1%) Query: 15 VHALERFSAEIAPGEIIAIIGGSGCGKSTLLRAIAGLDRASTGSVTLDNAVITSPHAKIG 74 + A+++F EI GE IAI+G SGCGKSTLLR + GLDR G + +D I + G Sbjct: 30 LEAIQQFDLEIGEGEFIAIVGASGCGKSTLLRLLIGLDRDYDGEIRVDGRPIAGIGGERG 89 Query: 75 IIFQEPRLLPWLSVADNIGFGLTD--LPAEARRARVASALARVGLADKAAAWPRELSGGQ 132 I+FQE RL PWL+V N+ GL + L + AR+ + VGL A+P +LSGG Sbjct: 90 IVFQEHRLFPWLTVQQNVALGLVNEALGETDKAARIDEYIRLVGLHGFERAYPHQLSGGM 149 Query: 133 AQRVAIARALVPQPEVLLLDEPFSALDAFTRRDLQDHLLDLWADTRPTLILVTHDVDEAV 192 AQRVAIAR LV P +LLLDEPFSALDA TR+ LQ+ LL + TR T +LVTHDV+EA+ Sbjct: 150 AQRVAIARGLVASPRLLLLDEPFSALDALTRQQLQEELLAIRRRTRITTLLVTHDVEEAL 209 Query: 193 VLADRVLVMRPRPGRLFEEITINLARPRDRKSELFDTFTRR 233 LADRV+VM PRPGR+ + + LA PR+R FD +R Sbjct: 210 YLADRVVVMEPRPGRIRRVVEVGLAHPRERGG--FDFLRQR 248 >CAC0107 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Cac Clostridium acetobutylicum Length = 279 Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 110/255 (43%), Positives = 151/255 (59%), Gaps = 5/255 (1%) Query: 2 LALKDVGKTY---PNGVHALERFSAEIAPGEIIAIIGGSGCGKSTLLRAIAGLDRASTGS 58 + +K V K + VH L+ + I GE I ++G SGCGKSTLL IAGL++ + G Sbjct: 3 IEIKGVSKDFISKEKKVHTLDEVNLSIKKGEFICLLGPSGCGKSTLLNIIAGLEKPTKGI 62 Query: 59 VTLDNAVITSPHAKIGIIFQEPRLLPWLSVADNIGFGLT--DLPAEARRARVASALARVG 116 V L+N I +P +FQE L PWL V DN+ FG+ D+P E RR + L V Sbjct: 63 VYLNNMEIKAPGPDRAFMFQESALFPWLKVIDNVEFGMKIKDVPKEERREKALKYLKMVH 122 Query: 117 LADKAAAWPRELSGGQAQRVAIARALVPQPEVLLLDEPFSALDAFTRRDLQDHLLDLWAD 176 L ++ ELSGG QRVA+ARAL EVLL+DEPFSALD+ T+ LQ L ++W + Sbjct: 123 LTKFQNSYVHELSGGMRQRVALARALTLDSEVLLMDEPFSALDSQTKSILQLELQNIWWE 182 Query: 177 TRPTLILVTHDVDEAVVLADRVLVMRPRPGRLFEEITINLARPRDRKSELFDTFTRRVLT 236 T+ T++ VTH+V+EAV+LADRV+VM PGR+ I LARPR+ +S R V+ Sbjct: 183 TKKTIVFVTHNVEEAVLLADRVVVMAANPGRIKNIFEIKLARPREAQSVDLSYVAREVMR 242 Query: 237 ALDRSLDRSVRDVTD 251 L +++ + D Sbjct: 243 DLKEEVEKVAKTEYD 257