BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0036.p (279 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3448 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 219 4e-57 YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 187 3e-47 BS_ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 181 2e-45 AGpT164 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 177 3e-44 PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 175 9e-44 >PA3448 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 274 Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 124/245 (50%), Positives = 165/245 (67%), Gaps = 1/245 (0%) Query: 34 LPVALALGWELVVALGYSNGRLVPPPSKVFETIVELAKSGELSRHILATLWRVGAGFALG 93 LP+ WE +V LG+ +P PS + T+VELA+ GEL H+ A+L RV AGFA+G Sbjct: 30 LPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELAR-GELWGHVGASLARVAAGFAIG 88 Query: 94 VVAGTILGAISGYWDFAKRLLDPTVQALRAIPSLAWVPLFVLWLGIFETSKVALIAVGVF 153 ++G G A+ L+P+ QALRAIPSLAWVPL +LW GI ET K+ LIA+G F Sbjct: 89 SGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPKIVLIALGAF 148 Query: 154 FPIYLGVMGAILSVDRKVVEVGRVFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMFV 213 FP+YL ++ + VDRK VE+GR++RLS A++RRILLPA LP LR L L WMF+ Sbjct: 149 FPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPNLFTGLRGALSLSWMFL 208 Query: 214 VAAELIGASEGLGYLLLDGQQLGKPAQILAAIVIFAILGKLTDWLIEVAAAPLLRWQDAF 273 VAAELI A++GLGYLL DG++ +P ++AAI++ A LGKL+D L+ LRW+D+F Sbjct: 209 VAAELIAATQGLGYLLSDGRETSRPDLVIAAILVLAALGKLSDGLLRSLERRALRWRDSF 268 Query: 274 GARGG 278 GG Sbjct: 269 DGEGG 273 >YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ype Yersinia pestis Length = 265 Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 94/247 (38%), Positives = 156/247 (63%) Query: 33 VLPVALALGWELVVALGYSNGRLVPPPSKVFETIVELAKSGELSRHILATLWRVGAGFAL 92 +LPVAL +GW++ V G+ + R++P PS V L KSGEL +H+ + WR GF++ Sbjct: 17 ILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSI 76 Query: 93 GVVAGTILGAISGYWDFAKRLLDPTVQALRAIPSLAWVPLFVLWLGIFETSKVALIAVGV 152 G G +LG I+G + +RLL+ +VQ +R +P LA +PL +LW GI E++K+ L+A+G Sbjct: 77 GGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGT 136 Query: 153 FFPIYLGVMGAILSVDRKVVEVGRVFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMF 212 FPIYL I ++D ++E+ R + LSG ++ +++LP LP+ +V +R LG W+ Sbjct: 137 LFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLT 196 Query: 213 VVAAELIGASEGLGYLLLDGQQLGKPAQILAAIVIFAILGKLTDWLIEVAAAPLLRWQDA 272 ++ AE I A+ G+GYL ++ ++ + ++ AIV++A+LGKL D ++ LRW A Sbjct: 197 LIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWLRWHPA 256 Query: 273 FGARGGQ 279 + + G+ Sbjct: 257 YQQKSGE 263 >BS_ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Bsu Bacillus subtilis Length = 276 Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/243 (38%), Positives = 151/243 (62%) Query: 31 GLVLPVALALGWELVVALGYSNGRLVPPPSKVFETIVELAKSGELSRHILATLWRVGAGF 90 GL+LP + W+++ LG + ++P P + T EL SGEL H+ +++R GF Sbjct: 32 GLLLPAVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGF 91 Query: 91 ALGVVAGTILGAISGYWDFAKRLLDPTVQALRAIPSLAWVPLFVLWLGIFETSKVALIAV 150 LG G ++G ++G+ + LDP++Q LR +P LA PLF+LW G E SK+ LIA+ Sbjct: 92 LLGAGLGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIAL 151 Query: 151 GVFFPIYLGVMGAILSVDRKVVEVGRVFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGW 210 G FFP+Y+ I VD K+ EV RV I +++LPA LP ++ +R+ LG+ W Sbjct: 152 GAFFPVYINTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLGIAW 211 Query: 211 MFVVAAELIGASEGLGYLLLDGQQLGKPAQILAAIVIFAILGKLTDWLIEVAAAPLLRWQ 270 + +V AEL+G+S G+GY+++D +Q + ++ A I+IFA++GKLTD + + LL+W+ Sbjct: 212 LGLVVAELMGSSSGVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKWR 271 Query: 271 DAF 273 +++ Sbjct: 272 NSY 274 >AGpT164 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 266 Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 88/240 (36%), Positives = 143/240 (59%) Query: 34 LPVALALGWELVVALGYSNGRLVPPPSKVFETIVELAKSGELSRHILATLWRVGAGFALG 93 PV + + W++ + G + ++P P V E LA SGEL +H+ A+ WR GF +G Sbjct: 25 FPVIVVILWQIASSGGLLSQGILPSPLAVLEAAWSLAASGELVQHMAASFWRAAVGFGIG 84 Query: 94 VVAGTILGAISGYWDFAKRLLDPTVQALRAIPSLAWVPLFVLWLGIFETSKVALIAVGVF 153 G G ++G W + L D ++Q LR IPSLA VPL ++W GI E +K+ L+A Sbjct: 85 SALGLFFGFVNGLWRTGETLFDSSLQMLRNIPSLAMVPLVIMWFGIGEEAKIFLVAFATM 144 Query: 154 FPIYLGVMGAILSVDRKVVEVGRVFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMFV 213 FPIYL I SVD+ ++E+GR + L+ ++R ++LP + + +V +R LG+ W+ + Sbjct: 145 FPIYLNTFHGIKSVDQGLIEMGRNYGLTRTGLVRDVILPGAMSSILVGVRYALGVAWIVL 204 Query: 214 VAAELIGASEGLGYLLLDGQQLGKPAQILAAIVIFAILGKLTDWLIEVAAAPLLRWQDAF 273 + AE I AS G+G L + ++ + ++ +I+++A+LGKLTDWL +A LRW ++ Sbjct: 205 IVAETIAASSGIGLLATNAREFLQSDVVVLSIILYALLGKLTDWLARLAENRWLRWHPSY 264 >PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 262 Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 92/245 (37%), Positives = 148/245 (60%) Query: 34 LPVALALGWELVVALGYSNGRLVPPPSKVFETIVELAKSGELSRHILATLWRVGAGFALG 93 LP+ L W+ V G+ + R++P PS V E L +SGE+ +H+ + WR GF +G Sbjct: 16 LPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRAAIGFLIG 75 Query: 94 VVAGTILGAISGYWDFAKRLLDPTVQALRAIPSLAWVPLFVLWLGIFETSKVALIAVGVF 153 G +LG ++G + +R LD +VQ +R +P LA +PL +LW GI E++K+ L+A+G Sbjct: 76 GAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTL 135 Query: 154 FPIYLGVMGAILSVDRKVVEVGRVFRLSGPAMIRRILLPAVLPAYVVALRVGLGLGWMFV 213 FPIYL I +D ++E+ R + LSG A+ R+++LP LP+ +V +R LG W+ + Sbjct: 136 FPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGVRFALGFMWLTL 195 Query: 214 VAAELIGASEGLGYLLLDGQQLGKPAQILAAIVIFAILGKLTDWLIEVAAAPLLRWQDAF 273 + AE I AS G+GYL ++ ++ + ++ AI+++A+LGKL D LRW A+ Sbjct: 196 IVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERVWLRWHPAY 255 Query: 274 GARGG 278 +GG Sbjct: 256 QVKGG 260