BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0013.p (280 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl430_1 [V] COG1131 ABC-type multidrug transport system, ATPase... 162 7e-40 CAC3551 [CP] COG4555 ABC-type Na+ transport system, ATPase compo... 162 8e-40 PH0913 [V] COG1131 ABC-type multidrug transport system, ATPase c... 160 4e-39 BMEI0654_1 [V] COG1131 ABC-type multidrug transport system, ATPa... 153 4e-37 MA1536 [V] COG1131 ABC-type multidrug transport system, ATPase c... 153 5e-37 >AGl430_1 [V] COG1131 ABC-type multidrug transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 530 Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 3/241 (1%) Query: 26 VDQGGSAAIDVAHLVKVYKTTRAVDDISFRIARGSITGLLGGNGAGKTTTIAMIMGLVLP 85 V G AI+ +HL + AVD++SF+I RG I G LG NG GK+TT+ M+ GL+ Sbjct: 280 VTHDGDYAIEASHLSMRFGDFTAVDNVSFKIPRGEIFGFLGSNGCGKSTTMKMLTGLLAA 339 Query: 86 TSGSVEVLGARIPEQRYDVLGRMNFESPYVDMPMRLTVRQNLTIFGRLYAVQH--LRERI 143 + G ++ G ++ + R+ + S + LTVRQNL + RL+ + ++ RI Sbjct: 340 SEGEAKLFGHKVDASDMAIRHRVGYMSQAFSLYSELTVRQNLDLHARLFKLPEATIQPRI 399 Query: 144 DQLADDLDLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPDTADWVRQ 203 ++A+ DL +D L G + R++LA A+I+ PD+L+LDEPT+ +DP D Q Sbjct: 400 AEMAERFDLGTVMDTLPDDLPLGIRQRLSLAVAMIHSPDILILDEPTSGVDPVARDGFWQ 459 Query: 204 HLETYRKTHNATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERIMARYNRDTLEEVF 263 L + N TI +++H M E ER CDR+ +M GK+ D+P+ I N +TLEE F Sbjct: 460 ILADLSRNDNVTIFISTHFMNEAER-CDRISLMHAGKVLISDTPDAITKSRNAETLEEAF 518 Query: 264 L 264 + Sbjct: 519 V 519 Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 11/239 (4%) Query: 36 VAHLVKV---YKTTRAVDDISFRIARGSITGLLGGNGAGKTTTIAMIMGLVLPTSGSVEV 92 VA L V + +T A+ DIS I G + GL+G +G GK++ +++I G G+VEV Sbjct: 22 VARLTDVRLAFGSTVALADISVEIPAGRMIGLIGPDGVGKSSLLSLISGARAIQKGNVEV 81 Query: 93 LGARI--PEQRYDVLGRMNFESPYV--DMPMRLTVRQNLTIFGRLYAVQHLRER---IDQ 145 L + P R D R+ + + ++ L+V +N+ FGRL+ Q RER I + Sbjct: 82 LAGDMSDPRHREDTCPRIAYMPQGLGKNLYPTLSVFENIDFFGRLFG-QDGRERKARIAE 140 Query: 146 LADDLDLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPDTADWVRQHL 205 L L+ F DR KLS G K ++ L ALI++PDLL+LDEPT +DP + + + Sbjct: 141 LLKSTGLERFADRPAMKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRQFWELI 200 Query: 206 ETYRKTHNATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERIMARYNRDTLEEVFL 264 ++ R ++ + +E D ++ M GKI SP ++ R + L+ F+ Sbjct: 201 DSIRAGRPGMSVIVATAYMEEAAGFDWLVAMDGGKILATGSPGELLERTSTANLDAAFI 259 >CAC3551 [CP] COG4555 ABC-type Na+ transport system, ATPase component Cac Clostridium acetobutylicum Length = 238 Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 88/238 (36%), Positives = 142/238 (59%), Gaps = 4/238 (1%) Query: 34 IDVAHLVKVYKTTRAVDDISFRIARGSITGLLGGNGAGKTTTIAMIMGLVLPTSGSVEVL 93 ++V L K +K AVD+ISF + G I GLLG NGAGKTTT+ M+ ++ T G + Sbjct: 2 VEVKGLTKRFKDITAVDNISFEVKEGEIVGLLGENGAGKTTTLRMLATMLKITDGKAIIN 61 Query: 94 GARIPEQRYDVLGRMN-FESPYVDMPMRLTVRQNLTIFGRLYAV--QHLRERIDQLADDL 150 G ++ V G + V + RLT R+N+ F L + + ++ ID L L Sbjct: 62 GYDAQKESDKVRGEIGILFGGEVGIYDRLTARENIMYFAELNGMSNEEAKKSIDNLTKSL 121 Query: 151 DLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPDTADWVRQHLETYRK 210 ++E++D+ GK S G K +V++A+++++ P ++L DEPT LD +A + Q + K Sbjct: 122 QMEEYIDKRVGKFSRGMKQKVSIARSIVHNPSVVLFDEPTTGLDV-SASRIVQDFILHCK 180 Query: 211 THNATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERIMARYNRDTLEEVFLDVAR 268 N ++ +SH+M EVE+LCDRVII+ +GKI ++ S E + ++N + LEEVFL++ + Sbjct: 181 NENKAVVFSSHSMPEVEKLCDRVIIIHKGKIVEEGSIEALKKKHNNNNLEEVFLELIK 238 >PH0913 [V] COG1131 ABC-type multidrug transport system, ATPase component Pho Pyrococcus horikoshii Length = 324 Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/222 (40%), Positives = 136/222 (61%), Gaps = 6/222 (2%) Query: 33 AIDVAHLVKVYKTTRAVDDISFRIARGSITGLLGGNGAGKTTTIAMIMGLVLPTSGSVEV 92 AI V +LVK Y AV ISF++ RG I LG NGAGKTTT+ M+ L+ PTSG V Sbjct: 6 AIIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRAIV 65 Query: 93 LGARIPEQRYDVLGRMN--FESPYVDMPMRLTVRQNLTIFGRLYAV--QHLRERIDQLAD 148 G + ++ +V ++ F+ P VD LT +N+ I GR+Y + Q L+++I++L Sbjct: 66 AGHDVVKESREVRKKIGVVFQDPSVDR--ELTAWENMYIHGRIYGLKGQELKKKIEELLK 123 Query: 149 DLDLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPDTADWVRQHLETY 208 ++L EF DR S G + R+ +A+ALI+EP++L LDEPT LDP T + ++++T Sbjct: 124 FVELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWEYIKTM 183 Query: 209 RKTHNATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERI 250 ++ H+ TI L +H M E E+L DR+ I+ GKI + + E + Sbjct: 184 KEEHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEEL 225 >BMEI0654_1 [V] COG1131 ABC-type multidrug transport system, ATPase component Bme Brucella melitensis Length = 472 Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 139/255 (54%), Gaps = 5/255 (1%) Query: 22 QTPAVDQGGSAAIDVAHLVKVYKTTRAVDDISFRIARGSITGLLGGNGAGKTTTIAMIMG 81 + PA D + AI+ H+ + AVD++SFRI RG I G LG NG GKTTT+ ++ G Sbjct: 193 RAPASDT--AIAIEAEHVTVRFGDFTAVDNVSFRIPRGEIFGFLGSNGCGKTTTMKVLTG 250 Query: 82 LVLPTSGSVEVLGARIPEQRYDVLGRMNFESPYVDMPMRLTVRQNLTIFGRLYAVQH--L 139 L+ + G+ + G + + D+ + + S + LTV QNL + RL+ ++ Sbjct: 251 LLPASEGTARLFGREVDPKDIDIRRHVGYMSQAFSLYSELTVHQNLELHARLFGMEPDVT 310 Query: 140 RERIDQLADDLDLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPDTAD 199 RI +L DL + +D + G + R++LA ALI+ PD+L+LDEPT+ +DP D Sbjct: 311 ARRIKELTARFDLADVMDELPDAMPLGIRQRLSLAVALIHSPDILILDEPTSGVDPVARD 370 Query: 200 WVRQHLETYRKTHNATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERIMARYNRDTL 259 Q L + N TI +++H M E E LCDR+ +M GK+ D+P+ I N TL Sbjct: 371 AFWQILADLSRRDNVTIFVSTHFMNEAE-LCDRISLMHAGKVLISDTPKAITESRNAATL 429 Query: 260 EEVFLDVARGRVREG 274 E+ F+ + + EG Sbjct: 430 EDAFVAFLQDAIGEG 444 Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 2/134 (1%) Query: 142 RIDQLADDLDLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPDTADWV 201 RI L + F +R GKLS G K + +L +LI++PDLL+LDEPT +DP + Sbjct: 52 RIADLLARTGMSAFANRPAGKLSGGMKQKTSLCCSLIHDPDLLILDEPTTGVDPLSRRQF 111 Query: 202 RQHLETYRKTH-NATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERIMARYNRDTLE 260 + ++ RK ++++A+ M E ER D ++ M G+I +P+ ++ R + L+ Sbjct: 112 WELIDDIRKDRPGMSVIVATAYMEEAERF-DWLVAMNDGQILATGTPQELLERTDTPNLD 170 Query: 261 EVFLDVARGRVREG 274 F+ + R G Sbjct: 171 AAFIALLPEEQRRG 184 >MA1536 [V] COG1131 ABC-type multidrug transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 356 Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 89/245 (36%), Positives = 140/245 (57%), Gaps = 11/245 (4%) Query: 5 SQWLNDGHMQQIGTGQAQTPAVDQGGSAAIDVAHLVKVY---KTTRAVDDISFRIARGSI 61 S + + IG Q+ + AI+ HL KV+ RAVD+++ +I +G + Sbjct: 18 SASIESTGIDSIGVELEQSRIARKTDEFAIETIHLSKVFGKENQIRAVDNLNLQIRKGEV 77 Query: 62 TGLLGGNGAGKTTTIAMIMGLVLPTSGSVEVLGARIPEQRYDV---LGRMNFESPYVDMP 118 G +G NGAGKTTT+ M++GL+ P+ GS +V G I + ++ G + + + D Sbjct: 78 FGFVGPNGAGKTTTMKMLIGLLEPSEGSGKVAGFDIIREVINIRETTGVLPEPAGFYD-- 135 Query: 119 MRLTVRQNLTIFGRLYAVQ-HLRE-RIDQLADDLDLKEFLDRSNGKLSAGQKTRVALAKA 176 LT RQNL + +LY ++ +RE RI L + + L +D+ G S G + R LA+A Sbjct: 136 -NLTARQNLRFYAKLYNIEPDIREKRIVSLLETVGLTRAVDQKTGGFSTGMRKRFGLAQA 194 Query: 177 LINEPDLLLLDEPTASLDPDTADWVRQHLETYRKTHNATILLASHNMLEVERLCDRVIIM 236 LINEP +L LDEPT+ +DP A +R ++ ++ T+ L+SH+M EVE +CDR+ I+ Sbjct: 195 LINEPSVLFLDEPTSGIDPLGAQMMRDLIKDLNRSKGVTVFLSSHSMAEVEEICDRIAII 254 Query: 237 KRGKI 241 RGK+ Sbjct: 255 ARGKL 259