BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0240.0003.p (211 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr8255 [R] COG0612 Predicted Zn-dependent peptidases Mlo Mesorh... 197 1e-50 BMEII1037 [R] COG0612 Predicted Zn-dependent peptidases Bme Bruc... 192 3e-49 RSc0387 [R] COG0612 Predicted Zn-dependent peptidases Rso Ralsto... 136 3e-32 PA0372 [R] COG0612 Predicted Zn-dependent peptidases Pae Pseudom... 122 8e-28 VC0554 [R] COG0612 Predicted Zn-dependent peptidases Vch Vibrio ... 121 9e-28 >mlr8255 [R] COG0612 Predicted Zn-dependent peptidases Mlo Mesorhizobium loti Length = 462 Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 99/201 (49%), Positives = 131/201 (65%), Gaps = 1/201 (0%) Query: 1 MFKGTTKHQADEFSQTVLRVGGNQNAFTGRDYTSYFQHVPREQLGKMMEFEADRMTGLIL 60 MFK TT H A EF + V +GG+ NAFT DYT++ + V L +MM FEADRM LIL Sbjct: 92 MFKATTNHAAGEFDRAVSDIGGSNNAFTSYDYTAFHETVAPSALEQMMGFEADRMRNLIL 151 Query: 61 KDRDVLSERDVVLEEYNMRVANRPDARLVEQMMAALYLNHPYGHPVIGWRQEIENLDRED 120 D + +ERDV+LEE R+ N P A L E++ A L+ N PY PVIGW QE+E L+R D Sbjct: 152 TDDVIKTERDVILEERRSRIDNNPQAVLDEEVDATLWQNQPYRIPVIGWMQEMEQLNRTD 211 Query: 121 ALAFYKRFYAPNNAILIIAGDVKVSEVRPMVERNFGGIPPQPSIPAERLRPQEPTPAAPR 180 A+AFY ++Y PNNA+LI+AGDV+ V+ + E+ +G + P +P R+RP EP R Sbjct: 212 AVAFYDKYYRPNNAVLIVAGDVEPETVKALAEKTYGKVARGPDLP-PRIRPVEPEQNTKR 270 Query: 181 TVTLADPRVEQPALRRLYLVP 201 TVTLAD RV P+ ++VP Sbjct: 271 TVTLADARVSVPSFSTQWVVP 291 >BMEII1037 [R] COG0612 Predicted Zn-dependent peptidases Bme Brucella melitensis Length = 464 Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 96/201 (47%), Positives = 128/201 (63%), Gaps = 1/201 (0%) Query: 1 MFKGTTKHQADEFSQTVLRVGGNQNAFTGRDYTSYFQHVPREQLGKMMEFEADRMTGLIL 60 MFKGT H A EFS + +GG +NAFT DYT+YFQ V E L +M+FE+DRM L+L Sbjct: 65 MFKGTKNHPAGEFSARIASIGGQENAFTSYDYTAYFQRVSPEALEMVMDFESDRMENLVL 124 Query: 61 KDRDVLSERDVVLEEYNMRVANRPDARLVEQMMAALYLNHPYGHPVIGWRQEIENLDRED 120 + V +ER+V+LEE MR+ + P A L+E A L+ NHPY PVIGW+QE+E L ++ Sbjct: 125 DEEAVKTEREVILEERRMRIDSNPGAMLMENTDAVLFYNHPYRKPVIGWQQEMEKLSLKN 184 Query: 121 ALAFYKRFYAPNNAILIIAGDVKVSEVRPMVERNFGGIPPQPSIPAERLRPQEPTPAAPR 180 A+ FY ++Y PNNA L+IAGDV VR + + + + + + R RPQEP A R Sbjct: 185 AIDFYNQYYTPNNATLVIAGDVTPERVRELAMKTWANVHKRAEVLL-RERPQEPAKHAAR 243 Query: 181 TVTLADPRVEQPALRRLYLVP 201 VTL D RV P+ R +LVP Sbjct: 244 VVTLHDERVSTPSFRISWLVP 264 >RSc0387 [R] COG0612 Predicted Zn-dependent peptidases Rso Ralstonia solanacearum Length = 501 Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 109/201 (54%), Gaps = 3/201 (1%) Query: 1 MFKGTTKHQADEFSQTVLRVGGNQNAFTGRDYTSYFQHVPREQLGKMMEFEADRMTGLIL 60 MFKGT EFS+ V +GG +NA T RD+T YFQ + + L +M EADRM L L Sbjct: 110 MFKGTRAVGPGEFSRRVAALGGRENAMTTRDFTMYFQQIEKSHLADVMALEADRMANLQL 169 Query: 61 KDRDVLSERDVVLEEYNMRVANRPDARLVEQMMAALYLNHPYGHPVIGWRQEIENLDRED 120 D++ E +VV EE MR+ + A + EQM+A L+ PY +P IGW +++ + +D Sbjct: 170 TDKEFKPEMNVVKEERRMRIDDSARATVYEQMLAVLFNAAPYRNPTIGWPSDLDTMTVQD 229 Query: 121 ALAFYKRFYAPNNAILIIAGDVKVSEVRPMVERNFGGIPPQPSIPAERLRPQEPTPAAPR 180 A +Y ++YAPNNA +++ GDV EV +R +G + QP R EP + Sbjct: 230 AQDWYHKWYAPNNATVVVTGDVNPDEVFRQAQRTYGKL--QPHALPRRYAQDEPKQVGVK 287 Query: 181 TVTLADPRVEQPALRRLYLVP 201 + + P E P + Y P Sbjct: 288 RIWVKAP-AENPYVVLAYKAP 307 >PA0372 [R] COG0612 Predicted Zn-dependent peptidases Pae Pseudomonas aeruginosa Length = 465 Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 97/168 (57%) Query: 1 MFKGTTKHQADEFSQTVLRVGGNQNAFTGRDYTSYFQHVPREQLGKMMEFEADRMTGLIL 60 MFKG+ K E S+ + +G +NAFT DYT+Y+Q + R++L +E EADRM L L Sbjct: 89 MFKGSRKLGPGEASRVLRDLGAEENAFTTDDYTAYYQVLARDRLPVALEMEADRMAHLSL 148 Query: 61 KDRDVLSERDVVLEEYNMRVANRPDARLVEQMMAALYLNHPYGHPVIGWRQEIENLDRED 120 SE +V+ EE +R + P+A E+ AA Y Y P IGW +++ + +D Sbjct: 149 PVDQFKSEIEVIKEERRLRTDDNPNALAFERFKAAAYPASGYHTPTIGWMADLQRMTIDD 208 Query: 121 ALAFYKRFYAPNNAILIIAGDVKVSEVRPMVERNFGGIPPQPSIPAER 168 +Y+ +YAPNNA L++ GDV EV+ + +R FG IP + PA + Sbjct: 209 LRHWYESWYAPNNATLVVVGDVTADEVKTLAKRYFGEIPWRQLPPARK 256 >VC0554 [R] COG0612 Predicted Zn-dependent peptidases Vch Vibrio cholerae Length = 952 Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 109/199 (54%), Gaps = 10/199 (5%) Query: 1 MFKGTTKHQADE-FSQTVLRVGGNQNAFTGRDYTSYFQHVPREQLGKMMEFEADRMTGLI 59 MF+G+ KH D+ + + GG+ N T RD T+YF+ VP QL KM+ EADRM L+ Sbjct: 102 MFQGS-KHVGDQQHFRLITEAGGSLNGTTNRDRTNYFETVPANQLEKMLWLEADRMGFLL 160 Query: 60 --LKDRDVLSERDVVLEEYNMRVANRPDARLVEQMMAALY-LNHPYGHPVIGWRQEIENL 116 + R +RD V E NRP + E+M ALY HPY IG+ +++ + Sbjct: 161 DAVSQRKFEIQRDTVKNERAQNYDNRPYGLMWEKMGEALYPEGHPYSWQTIGYVSDLDRV 220 Query: 117 DREDALAFYKRFYAPNNAILIIAGDVKVSEVRPMVERNFGGIPPQPSIPAERLRPQEPT- 175 D D AF+ R+Y PNNA+L I GD+ V + V++ FG IP P + P++P Sbjct: 221 DVNDLKAFFLRWYGPNNAVLTIGGDLDVKQTLAWVQKYFGSIPKGPDVVDA---PKQPAR 277 Query: 176 PAAPRTVTLADPRVEQPAL 194 + R +TL D RV+QP L Sbjct: 278 LSEDRFITLED-RVQQPML 295