BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0233.0001.p         (144 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0584 [L] COG3039 Transposase and inactivated derivatives, IS5...   115   2e-26
RSp0155 [L] COG3039 Transposase and inactivated derivatives, IS5...   115   2e-26
RSc3421 [L] COG3039 Transposase and inactivated derivatives, IS5...   115   2e-26
RSc3145 [L] COG3039 Transposase and inactivated derivatives, IS5...   115   2e-26
RSc3123 [L] COG3039 Transposase and inactivated derivatives, IS5...   115   2e-26

>RSp0584 [L] COG3039 Transposase and inactivated derivatives, IS5 family Rso
           Ralstonia solanacearum
          Length = 440

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 1   VLHARALPDNPYDGHTLRDVIDRTETLTGCAIERPYADKGYRGHDAQNPRRVFISGQKRG 60
           VL AR++P NPYDGHTL + +++ E L+    +    D+GYRG D +  + V+  G +RG
Sbjct: 301 VLGARSMPGNPYDGHTLAEALEQAEILSDARAQIAIVDRGYRGVDVEGVK-VYHPGLRRG 359

Query: 61  VFGIIRRELRRRSAIEPIIGHLKTDGHLGRCYLKGRAGDAANVILSAVGHNFRRILAWLR 120
           +   +R  +RRRSAIEP IGH+K DG L R +LKG  GDA + +L   GHN R IL  LR
Sbjct: 360 ITRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAMHAVLCGAGHNLRMILRKLR 419

Query: 121 GLWRLFLATLIAAI 134
            L+ + LA L+  I
Sbjct: 420 LLYAVILAALLGRI 433


>RSp0155 [L] COG3039 Transposase and inactivated derivatives, IS5 family Rso
           Ralstonia solanacearum
          Length = 440

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 1   VLHARALPDNPYDGHTLRDVIDRTETLTGCAIERPYADKGYRGHDAQNPRRVFISGQKRG 60
           VL AR++P NPYDGHTL + +++ E L+    +    D+GYRG D +  + V+  G +RG
Sbjct: 301 VLGARSMPGNPYDGHTLAEALEQAEILSDARAQIAIVDRGYRGVDVEGVK-VYHPGLRRG 359

Query: 61  VFGIIRRELRRRSAIEPIIGHLKTDGHLGRCYLKGRAGDAANVILSAVGHNFRRILAWLR 120
           +   +R  +RRRSAIEP IGH+K DG L R +LKG  GDA + +L   GHN R IL  LR
Sbjct: 360 ITRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAMHAVLCGAGHNLRMILRKLR 419

Query: 121 GLWRLFLATLIAAI 134
            L+ + LA L+  I
Sbjct: 420 LLYAVILAALLGRI 433


>RSc3421 [L] COG3039 Transposase and inactivated derivatives, IS5 family Rso
           Ralstonia solanacearum
          Length = 440

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 1   VLHARALPDNPYDGHTLRDVIDRTETLTGCAIERPYADKGYRGHDAQNPRRVFISGQKRG 60
           VL AR++P NPYDGHTL + +++ E L+    +    D+GYRG D +  + V+  G +RG
Sbjct: 301 VLGARSMPGNPYDGHTLAEALEQAEILSDARAQIAIVDRGYRGVDVEGVK-VYHPGLRRG 359

Query: 61  VFGIIRRELRRRSAIEPIIGHLKTDGHLGRCYLKGRAGDAANVILSAVGHNFRRILAWLR 120
           +   +R  +RRRSAIEP IGH+K DG L R +LKG  GDA + +L   GHN R IL  LR
Sbjct: 360 ITRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAMHAVLCGAGHNLRMILRKLR 419

Query: 121 GLWRLFLATLIAAI 134
            L+ + LA L+  I
Sbjct: 420 LLYAVILAALLGRI 433


>RSc3145 [L] COG3039 Transposase and inactivated derivatives, IS5 family Rso
           Ralstonia solanacearum
          Length = 440

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 1   VLHARALPDNPYDGHTLRDVIDRTETLTGCAIERPYADKGYRGHDAQNPRRVFISGQKRG 60
           VL AR++P NPYDGHTL + +++ E L+    +    D+GYRG D +  + V+  G +RG
Sbjct: 301 VLGARSMPGNPYDGHTLAEALEQAEILSDARAQIAIVDRGYRGVDVEGVK-VYHPGLRRG 359

Query: 61  VFGIIRRELRRRSAIEPIIGHLKTDGHLGRCYLKGRAGDAANVILSAVGHNFRRILAWLR 120
           +   +R  +RRRSAIEP IGH+K DG L R +LKG  GDA + +L   GHN R IL  LR
Sbjct: 360 ITRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAMHAVLCGAGHNLRMILRKLR 419

Query: 121 GLWRLFLATLIAAI 134
            L+ + LA L+  I
Sbjct: 420 LLYAVILAALLGRI 433


>RSc3123 [L] COG3039 Transposase and inactivated derivatives, IS5 family Rso
           Ralstonia solanacearum
          Length = 440

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 1   VLHARALPDNPYDGHTLRDVIDRTETLTGCAIERPYADKGYRGHDAQNPRRVFISGQKRG 60
           VL AR++P NPYDGHTL + +++ E L+    +    D+GYRG D +  + V+  G +RG
Sbjct: 301 VLGARSMPGNPYDGHTLAEALEQAEILSDARAQIAIVDRGYRGVDVEGVK-VYHPGLRRG 359

Query: 61  VFGIIRRELRRRSAIEPIIGHLKTDGHLGRCYLKGRAGDAANVILSAVGHNFRRILAWLR 120
           +   +R  +RRRSAIEP IGH+K DG L R +LKG  GDA + +L   GHN R IL  LR
Sbjct: 360 ITRGLRAMIRRRSAIEPAIGHMKADGKLDRNWLKGSLGDAMHAVLCGAGHNLRMILRKLR 419

Query: 121 GLWRLFLATLIAAI 134
            L+ + LA L+  I
Sbjct: 420 LLYAVILAALLGRI 433