BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0228.0004.p (242 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll3908 [QR] COG0500 SAM-dependent methyltransferases Mlo Mesorh... 329 3e-90 SMc01426 [QR] COG0500 SAM-dependent methyltransferases Sme Sinor... 327 1e-89 BMEI1834 [QR] COG0500 SAM-dependent methyltransferases Bme Bruce... 305 5e-83 AGc1920 [QR] COG0500 SAM-dependent methyltransferases Atu Agroba... 217 2e-56 L130150 [QR] COG0500 SAM-dependent methyltransferases Lla Lactoc... 207 2e-53 >mll3908 [QR] COG0500 SAM-dependent methyltransferases Mlo Mesorhizobium loti Length = 242 Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 153/242 (63%), Positives = 185/242 (76%) Query: 1 MAQNIYDDPGFFAGYSQLPRQVRGLLGAPEWPAIRALLPDIAGKRAVDLGCGFGWVSRWM 60 MAQNIYD P FFAGYSQL R + GL GA EWPA+RA+LP++ G R VDLGCGFGW RW Sbjct: 1 MAQNIYDQPDFFAGYSQLGRSIEGLDGAAEWPALRAMLPEVGGLRIVDLGCGFGWFCRWA 60 Query: 61 REQGASDVLGVDLSQNMIARATAMTQDAAITYEIADLETLELPKSTFDLAYSALTFHYIR 120 E GAS VLG+DLS+ M+ARA A D ITYE ADL+ L LP+ +FDLAYS+L HY+ Sbjct: 61 HEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE 120 Query: 121 DFDRLARMLYRALVPEGHLVFTIEHPIYMAAAHPDWGQDEDGRKTWPVNRYFIEGERRTD 180 D RL R +++AL P GH VF+ EHPIYMA A P W D +GR+TWP++RY +EG R+TD Sbjct: 121 DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTD 180 Query: 181 WYVKGVLKYHRTIGTTLNALIGAGFTLRHVEEFSPTREQVKAMPELADELERPMMLLVSA 240 W KGV+K+HRT+GTTLNALI +GF + HVEEF PT Q+ A PELA+EL+RPM LLVSA Sbjct: 181 WLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEFCPTDAQITARPELAEELDRPMFLLVSA 240 Query: 241 QR 242 +R Sbjct: 241 RR 242 >SMc01426 [QR] COG0500 SAM-dependent methyltransferases Sme Sinorhizobium meliloti Length = 242 Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 148/242 (61%), Positives = 189/242 (78%) Query: 1 MAQNIYDDPGFFAGYSQLPRQVRGLLGAPEWPAIRALLPDIAGKRAVDLGCGFGWVSRWM 60 MAQN+YD P FF GYSQL R + GL GA EWPAIRA+LPD+ R +DLGCGFGW +RW Sbjct: 1 MAQNVYDRPEFFTGYSQLGRSLHGLAGAAEWPAIRAMLPDLRDLRVLDLGCGFGWFARWA 60 Query: 61 REQGASDVLGVDLSQNMIARATAMTQDAAITYEIADLETLELPKSTFDLAYSALTFHYIR 120 RE GA+ VLG+DLS+ MIARA T+D ++ Y IADLE L LP+++F AYS+L FHYI Sbjct: 61 RENGAAQVLGLDLSEKMIARARQETEDPSVEYRIADLEHLVLPEASFGFAYSSLAFHYIE 120 Query: 121 DFDRLARMLYRALVPEGHLVFTIEHPIYMAAAHPDWGQDEDGRKTWPVNRYFIEGERRTD 180 DFDRL R ++R+L+P H VFTIEHP+YMA +P W D +GR+ WP++RY +EG+R TD Sbjct: 121 DFDRLVRTIHRSLLPGSHFVFTIEHPVYMAPTNPGWSTDAEGRRIWPLDRYSVEGKRVTD 180 Query: 181 WYVKGVLKYHRTIGTTLNALIGAGFTLRHVEEFSPTREQVKAMPELADELERPMMLLVSA 240 W KGV+KYHRT+GTTLN LI AGF +R V+E+SPT +++ P+LA+E++RPMMLLV+A Sbjct: 181 WLAKGVVKYHRTLGTTLNTLIAAGFAIRRVQEWSPTADEIARNPDLAEEVDRPMMLLVAA 240 Query: 241 QR 242 QR Sbjct: 241 QR 242 >BMEI1834 [QR] COG0500 SAM-dependent methyltransferases Bme Brucella melitensis Length = 262 Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 142/241 (58%), Positives = 181/241 (75%) Query: 1 MAQNIYDDPGFFAGYSQLPRQVRGLLGAPEWPAIRALLPDIAGKRAVDLGCGFGWVSRWM 60 MAQNIYD FF YSQLPR V GL GAPEWP +R+LLPD+ G+ DLGCGFGW R+ Sbjct: 1 MAQNIYDRDDFFTAYSQLPRSVHGLEGAPEWPVVRSLLPDLTGRDIADLGCGFGWFCRFA 60 Query: 61 REQGASDVLGVDLSQNMIARATAMTQDAAITYEIADLETLELPKSTFDLAYSALTFHYIR 120 REQGA+ V G DLSQNM+ RA TQD A+ Y AD+E LELP+++FDL YS+L FHYIR Sbjct: 61 REQGAASVTGYDLSQNMLERARRDTQDDAVCYIQADMERLELPEASFDLVYSSLAFHYIR 120 Query: 121 DFDRLARMLYRALVPEGHLVFTIEHPIYMAAAHPDWGQDEDGRKTWPVNRYFIEGERRTD 180 DF R+ + ++ AL P+G VFTIEHPI+MA+ P W ++ +G+K WPV+ Y +EGER+TD Sbjct: 121 DFPRILKTIHAALRPDGRFVFTIEHPIFMASLAPGWIEEGNGQKRWPVDHYAVEGERQTD 180 Query: 181 WYVKGVLKYHRTIGTTLNALIGAGFTLRHVEEFSPTREQVKAMPELADELERPMMLLVSA 240 W +GV+KYHR + TT+NALI AGF + +EE+ P+ EQ+ A P L +E+ERPM+LLVSA Sbjct: 181 WLAEGVIKYHRRLSTTVNALIEAGFGINRLEEWYPSPEQIAAWPALLEEMERPMLLLVSA 240 Query: 241 Q 241 Sbjct: 241 S 241 >AGc1920 [QR] COG0500 SAM-dependent methyltransferases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 244 Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 105/243 (43%), Positives = 145/243 (59%), Gaps = 1/243 (0%) Query: 1 MAQNIYDDPGFFAGYSQLPRQVRGLLGAPEWPAIRALLPDIAGKRAVDLGCGFGWVSRWM 60 M QNIYDD GFF YS +PR + GL A EW +RA+LPD+ G+ +DLGCGFGW R+ Sbjct: 1 MKQNIYDDAGFFERYSAMPRSIEGLRQAGEWHELRAMLPDLKGRSFLDLGCGFGWHCRYA 60 Query: 61 REQGASDVLGVDLSQNMIARATAMTQDAAITYEIADLETLELPKSTFDLAYSALTFHYIR 120 EQGA+ ++GVDLS+NM+ RA + I Y A +E ++ P+ +FD+ S+L HY+R Sbjct: 61 AEQGAARIVGVDLSENMLRRAAEINGGPGIDYRRAAIEDIDFPRESFDVVLSSLALHYVR 120 Query: 121 DFDRLARMLYRALVPEGHLVFTIEHPIYMAAAHPDWGQDEDGRKT-WPVNRYFIEGERRT 179 D D ++ L G VF+IEHP++ A DW E G WP++ Y EG R + Sbjct: 121 DLDAAFAKIFAVLKAGGDFVFSIEHPVFTALEKQDWFYGEGGEILHWPLDNYQNEGVRHS 180 Query: 180 DWYVKGVLKYHRTIGTTLNALIGAGFTLRHVEEFSPTREQVKAMPELADELERPMMLLVS 239 +W V+KYHRT+ LN L+ AGF L + E P + PEL E RP+ L+V Sbjct: 181 NWMADDVVKYHRTVSGILNGLLSAGFALTQLAEPRPDPALMAERPELKHEDRRPIFLIVG 240 Query: 240 AQR 242 A++ Sbjct: 241 AKK 243 >L130150 [QR] COG0500 SAM-dependent methyltransferases Lla Lactococcus lactis Length = 245 Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 151/243 (62%), Gaps = 2/243 (0%) Query: 1 MAQNIYDDPGFFAGYSQLPRQVRGLLGAPEWPAIRALLPDIAGKRAVDLGCGFGWVSRWM 60 M QN YD+ FF Y+ + R +GL A EW + LLP+ K+ +DLGCG+GW +++ Sbjct: 1 MKQNKYDNERFFKNYASMSRSQKGLKAAGEWSELEKLLPNFQDKKVLDLGCGYGWHCKYV 60 Query: 61 REQGASDVLGVDLSQNMIARATAMTQDAAITYEIADLETLELPKSTFDLAYSALTFHYIR 120 GA +V+G+DLS M+ A + D ITY+ + +E + P TFD+ +S+L FHYI Sbjct: 61 VNHGAKEVVGIDLSHKMLEVALDINNDKKITYQQSAIEDINFPADTFDVVFSSLAFHYIS 120 Query: 121 DFDRLARMLYRALVPEGHLVFTIEHPIYMAAAHPDWGQDEDGRKT-WPVNRYFIEGERRT 179 +F+ L + + L G +F++EHP+Y ++ DW D +G+ +PV+ Y+ EG+R Sbjct: 121 NFEDLVCKISKWLKKNGEFIFSVEHPLYTSSGKQDWCYDAEGKILHFPVDNYYYEGKREV 180 Query: 180 DWYVKGVLKYHRTIGTTLNALIGAGFTLRHVEEFSPTREQVKAMPELADELERPMMLLVS 239 ++ + ++KYHRT+ +N+L+ +GF L ++ E P E ++ + E+ +E+ RPMMLL+S Sbjct: 181 NFLGEPIIKYHRTLTGYINSLLSSGFELTNLIEPKPPIE-MRELEEMKNEMRRPMMLLIS 239 Query: 240 AQR 242 A+ Sbjct: 240 ARN 242