BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0226.0021.p (267 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc01727 [G] COG2513 PEP phosphonomutase and related enzymes Sme... 197 2e-50 lin0067 [G] COG2513 PEP phosphonomutase and related enzymes Lin ... 184 2e-46 mll2772 [G] COG2513 PEP phosphonomutase and related enzymes Mlo ... 180 4e-45 Cgl1036 [G] COG2513 PEP phosphonomutase and related enzymes Cgl ... 131 1e-30 Rv1998c [G] COG2513 PEP phosphonomutase and related enzymes Mtu ... 117 2e-26 >SMc01727 [G] COG2513 PEP phosphonomutase and related enzymes Sme Sinorhizobium meliloti Length = 256 Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 111/246 (45%), Positives = 161/246 (65%), Gaps = 7/246 (2%) Query: 5 TQQQYAEAFHTLHRTGDPLVLFNAWDVATAKAIAKS-SRAIATSSGAVAAALGYADGENA 63 +Q++ A AF LHR GDP+VL+N WD +A+ +A++ ++A+AT S +VAAA GY DG+ Sbjct: 2 SQEERALAFGALHRKGDPVVLYNIWDAGSAQCVAEAGAKALATGSWSVAAAHGYGDGQKL 61 Query: 64 PLEMVEGLVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGK 123 PL ++ V + A+ +P+S+D E Y + P AA + A+++ AG IGIN ED +VG + Sbjct: 62 PLPLLLETVREIVAATDLPLSVDFEGAYSEDPAQAAANVAQVIDAGGIGINFEDQMVG-R 120 Query: 124 RQLATPEQHAAKIRAVRDAAQQLGIDLFINARTDPFLLKFGSPEQC--LTEAARRAKVYA 181 + ++ AA+IRA+R+ A++ GI LFINARTD FL + + + +A RA+ YA Sbjct: 121 GGVHPIDKQAARIRAIREMAERQGIALFINARTDLFLQESDAARHAALMEDAIARAEAYA 180 Query: 182 EAGADGIFVPGLTDLALIERFVQLTPLPVNIMVTQGVPEIGELARAGVRRVSLGPWP--- 238 +AGA G F PGL D LI R +PLPVN+M+ G P+I LA AGV RVS GP+P Sbjct: 181 DAGASGFFAPGLADRDLIARLCAASPLPVNVMMKPGAPDIATLAAAGVGRVSYGPFPYRE 240 Query: 239 MMAAMR 244 M+A +R Sbjct: 241 MIARLR 246 >lin0067 [G] COG2513 PEP phosphonomutase and related enzymes Lin Listeria innocua Length = 257 Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 93/234 (39%), Positives = 140/234 (59%), Gaps = 2/234 (0%) Query: 11 EAFHTLHRTGDPLVLFNAWDVATAKAIAKS-SRAIATSSGAVAAALGYADGENAPLEMVE 69 + +LH PL L+N WDVA+A+AI + + IATSS A+A +LG DGE+ + + Sbjct: 6 KKLKSLHELPAPLTLYNCWDVASARAIQQGGASVIATSSYAIAESLGVVDGEHLTFDEMF 65 Query: 70 GLVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGKRQ-LAT 128 ++SR+ +VS+P+++D+E GY + A + R+L G+N+ED L+G L + Sbjct: 66 SVISRIAENVSLPLTVDIETGYARNLEELAQNVERLLAIDVCGVNVEDQLIGAANPGLCS 125 Query: 129 PEQHAAKIRAVRDAAQQLGIDLFINARTDPFLLKFGSPEQCLTEAARRAKVYAEAGADGI 188 E KI+ +++ A ++ ++FINARTD F + EA RAK Y EAGAD I Sbjct: 126 TETQCDKIKTIKETAAKMSREIFINARTDVFFQGRDETVDLVGEAINRAKAYKEAGADAI 185 Query: 189 FVPGLTDLALIERFVQLTPLPVNIMVTQGVPEIGELARAGVRRVSLGPWPMMAA 242 F+PGL LI FV+ +PLPVNIM+ G+ + EL + GV+R+S GP+ A Sbjct: 186 FIPGLLSPKLIRAFVEKSPLPVNIMMMDGMLSVEELQKIGVKRISYGPFSFFQA 239 >mll2772 [G] COG2513 PEP phosphonomutase and related enzymes Mlo Mesorhizobium loti Length = 256 Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 106/236 (44%), Positives = 137/236 (58%), Gaps = 4/236 (1%) Query: 6 QQQYAEAFHTLHRTGDPLVLFNAWDVATAKAIAKS-SRAIATSSGAVAAALGYADGENAP 64 Q + A FH+LH G+P+VL+NAWD +AK + K+ ++AIAT S VAAA GYADGE P Sbjct: 4 QAERARTFHSLHVKGNPIVLYNAWDPGSAKIVEKAGAKAIATGSWPVAAAFGYADGEKIP 63 Query: 65 LEMVEGLVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGKR 124 LE+ + R+ +V +PV++DLE GYG P+ A + R L+AGAIG N ED +VGG Sbjct: 64 LELALDNIRRIVQAVDLPVTMDLEGGYGVEPEVVAQTVTRALQAGAIGFNFEDQIVGGT- 122 Query: 125 QLATPEQHAAKIRAVRDAAQQLGIDLFINARTDPFLLKF--GSPEQCLTEAARRAKVYAE 182 L ++ A A + GI F+NARTD FL + L +A RA Y + Sbjct: 123 GLHDITVQVKRVEAAAAAVKASGIPAFLNARTDIFLKAKPDAHDKALLDQAIERAHAYEK 182 Query: 183 AGADGIFVPGLTDLALIERFVQLTPLPVNIMVTQGVPEIGELARAGVRRVSLGPWP 238 AGA G F PGL D LIE + LPVNI+ VP LA GV R+S GP P Sbjct: 183 AGASGFFAPGLGDEGLIEALCKAVALPVNIIALAHVPPRQRLAELGVARISHGPVP 238 >Cgl1036 [G] COG2513 PEP phosphonomutase and related enzymes Cgl Corynebacterium glutamicum Length = 254 Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 8/235 (3%) Query: 7 QQYAEAFHTLHRTGDPLVLFNAWDVATAKAIAKSS-RAIATSSGAVAAALGYADGENAPL 65 + A F + H +G LVL WD +A + ++ + S VA A G +DGEN Sbjct: 5 KSLATKFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNF 64 Query: 66 EMVEGLVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGKRQ 125 +V ++T++VSIPVS+D+E+GYG +P A A+IL+AGA+GIN+ED + ++ Sbjct: 65 ADYMAVVKKITSAVSIPVSVDVESGYGLSP---ADLIAQILEAGAVGINVEDVVHSEGKR 121 Query: 126 LATPEQHAAKIRAVRDAAQQLGIDLFINARTDPFLLKFGSPEQCLTEAARRAKVYAEAGA 185 + ++HA I A R AA G+D+ IN RTD L E + EA +R K+ +AGA Sbjct: 122 VREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGA 181 Query: 186 DGIFVPGLTDLALIERFVQLTPLPVNIMVT----QGVPEIGELARAGVRRVSLGP 236 ++ GL+ +ER V +PVNI G ++ LA GVRRV+ GP Sbjct: 182 RSVYPVGLSTAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGP 236 >Rv1998c [G] COG2513 PEP phosphonomutase and related enzymes Mtu Mycobacterium tuberculosis H37Rv Length = 258 Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 92/248 (37%), Positives = 127/248 (51%), Gaps = 16/248 (6%) Query: 12 AFHTLHRTGDPLVLFNAWDVATAKA-IAKSSRAIATSSGAVAAALGYADGENAPLEMVEG 70 +FH LH G P VL NAWDV +A A +A+ AI T+S V+++ G+ DG A Sbjct: 2 SFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSSSGGHPDGHRA-TRGANI 60 Query: 71 LVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGKRQLATPE 130 ++ A + VS+D+E GY D PDA A A++ AG INIED +L P Sbjct: 61 ALAAALAPLQCYVSVDIEDGYSDEPDAIADYVAQLSTAG---INIEDS---SAEKLIDPA 114 Query: 131 QHAAKIRAVRDAAQQLGIDLFINARTDPFLLKFGSPEQCLTEAARRAKVYAEAGADGIFV 190 AAKI A++ Q ++F+NAR D + L+ T +RA Y +AGADG+FV Sbjct: 115 LAAAKIVAIK----QRNPEVFVNARVDTYWLR---QHADTTSTIQRALRYVDAGADGVFV 167 Query: 191 PGLTDLALIERFVQLTPLPVNIMVTQGVPEIGELARAGVRRVSLGPWPMMAAMRVIGQAA 250 P D + + P PVN + G+ I +L GV RVS G P A + AA Sbjct: 168 PLANDPDELAELTRNIPCPVNTLPVPGL-TIADLGELGVARVSTGSVPYSAGLYAAAHAA 226 Query: 251 AAVAASKQ 258 AV+ +Q Sbjct: 227 RAVSDGEQ 234