BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0226.0005.p (222 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc4541 [Q] COG1335 Amidases related to nicotinamidase Atu Agrob... 83 4e-16 alr2122 [Q] COG1335 Amidases related to nicotinamidase Nos Nosto... 79 6e-15 CC2795 [Q] COG1335 Amidases related to nicotinamidase Ccr Caulob... 75 1e-13 SMa1724 [Q] COG1335 Amidases related to nicotinamidase Sme Sinor... 73 6e-13 RSc2596 [Q] COG1335 Amidases related to nicotinamidase Rso Ralst... 73 6e-13 >AGc4541 [Q] COG1335 Amidases related to nicotinamidase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 246 Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 17/213 (7%) Query: 16 RTALLLVDPYNDFLSEDGMVFPRIKPIADEVGLLDNLRQLDGAVRAAGIQVVIVPHRRWE 75 TA+++VD N + +E G V I+ G + N+++ A RAAG+QV+ W+ Sbjct: 34 ETAVVVVDMQNAYSTEGGYVDLAGFDISGAKGTIANIKKTLDAARAAGVQVIYF-QNGWD 92 Query: 76 --------PGDYEDWDHPNPTQ----RLIMQRHSFARGEWGGDWYPDFAPKPGD-LVAQE 122 PG +W N + R +Q A+G W + P+PGD LV + Sbjct: 93 KDYVEAGGPGS-PNWHKSNALKTMRKRPELQGQLLAKGTWDYAIVDELQPQPGDILVPKT 151 Query: 123 HWGQSGFANTNLDFLLKQKGITHVIVVGLLANTCIESTARFAMELGYHVTLVRDATAAFS 182 + SGF NTN+D +L+ +GI +++ VG+ N C+ES+ R A L Y ++ DAT Sbjct: 152 RY--SGFFNTNMDSVLRARGIRNLVFVGIATNVCVESSLRDAFHLEYFGVMLEDATHHLG 209 Query: 183 HDMMYAAHELNGPTYAHSILTTTQVIAALPAAS 215 D + A N + + T + A+ Sbjct: 210 PDFIQQATVYNVEKFFGWVATVNDFCGVISQAA 242 >alr2122 [Q] COG1335 Amidases related to nicotinamidase Nos Nostoc sp. PCC 7120 Length = 202 Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 9/191 (4%) Query: 15 ERTALLLVDPYNDFLSEDGMVFPRIKPIADEVGLLDNLRQLDGAVRAAGIQVVIVPHRRW 74 + TA++L+ ND+ + DG++ I+ + +L+N +L G + + ++ P + Sbjct: 4 QSTAVILIGYQNDYFAADGILHNVIEESSRATKVLENTVELVGCLLQIPVLMIATP-IFF 62 Query: 75 EPGDYEDWDHPNPTQRLIMQRHSFARGEWGGDWYPDFAPKPGDLV-AQEHWGQSGFANTN 133 P +Y++ P + I + +F G + P ++ G + F NTN Sbjct: 63 TP-NYQELVEPVGILKTIKEVGAFQADTKGSQMIDELLPFCSKILEVPGKRGFNAFMNTN 121 Query: 134 LDFLLKQKGITHVIVVGLLANTCIESTARFAMELGYHVTLVRDATAA---FSHDMMYAAH 190 LD +L +K ITHV++ G + + CI+ST R A E GY V ++ D T+A F + Y H Sbjct: 122 LDMILHEKEITHVVIAGAVTSVCIDSTGRSAHEKGYQVVILSDCTSARTVFEQE-FYHTH 180 Query: 191 ELNGPTYAHSI 201 P YA +I Sbjct: 181 VF--PLYADTI 189 >CC2795 [Q] COG1335 Amidases related to nicotinamidase Ccr Caulobacter vibrioides Length = 225 Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 13/201 (6%) Query: 15 ERTALLLVDPYNDFLSEDGMVFPRIKPIADEVGLLDNLRQLDGAVRAAGIQVVIVPHRRW 74 + TA++++D N + S G + I+ + ++ + R+AG+ V+ W Sbjct: 14 KTTAVIVIDMQNAYASPGGYLDLAGFDISGAAKVTHEIKGVLEVARSAGMTVIYF-QNGW 72 Query: 75 EPGDYE-------DWDHPNPTQ----RLIMQRHSFARGEWGGDWYPDFAPKPGDLVAQEH 123 + G E +W N + R +Q ARG+W + D P+PGD+ + Sbjct: 73 DDGYVEAGGPGSPNWWKSNALKTMRARPELQGKLLARGQWDYELVDDLTPQPGDIRLHKT 132 Query: 124 WGQSGFANTNLDFLLKQKGITHVIVVGLLANTCIESTARFAMELGYHVTLVRDATAAFSH 183 SGF N+ LD +L+ +GI H++ G+ N C+EST R L Y T++ DAT Sbjct: 133 -RYSGFFNSQLDSVLRARGIRHLVFTGIATNVCVESTLRDGFMLEYFGTVLEDATHQAGP 191 Query: 184 DMMYAAHELNGPTYAHSILTT 204 D + A N T+ + TT Sbjct: 192 DFVQKAALFNIETFFGWVSTT 212 >SMa1724 [Q] COG1335 Amidases related to nicotinamidase Sme Sinorhizobium meliloti Length = 260 Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 12 YPRERTALLLVDPYNDFLSEDGMVFPRIKPIADEVGLLDNLRQLDGAVRAAGIQVVIVPH 71 YP + A+++VD ND+L+ P+ L+N +L A R +G VV + H Sbjct: 78 YPMSKRAIIVVDLQNDYLTTGKF------PLVGIDKALENAARLVDAARRSGDLVVNIRH 131 Query: 72 RRWEPGDYEDWDHPNPTQRLIMQRHSFARGEWGGDWYPDFAPKPGDLVAQEHWGQSGFAN 131 + F G G + P+ AP+ G+ V + + S F Sbjct: 132 ESPAGAPF------------------FVSGTEGAEIIPNIAPQHGEAVVTKRYPNS-FRE 172 Query: 132 TNLDFLLKQKGITHVIVVGLLANTCIESTARFAMELGYHVTLVRDATA 179 T L LL G+ V V+G +++ CI++TAR A +LGY T+V DA A Sbjct: 173 TELASLLSSAGVDEVTVIGAMSHMCIDATARAASDLGYKTTVVEDACA 220 >RSc2596 [Q] COG1335 Amidases related to nicotinamidase Rso Ralstonia solanacearum Length = 196 Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 5/195 (2%) Query: 16 RTALLLVDPYNDFLSEDGMVFPRIKPIADEVGLLDNLRQLDGAVRAAGIQVVIVPHRRWE 75 ++AL+L++ ND+LS G ++P + + N + R G+ V I ++E Sbjct: 6 KSALILIEYVNDWLSPSGGIYPSFQDREQVDTAIANSKIALAEARRRGMHV-IHASLKFE 64 Query: 76 PGDYEDWDHPNPTQRLIMQRHSFARGEWGGDWYPDFAPKPGDLVAQEHWGQSG-FANTNL 134 P ++ R +M+ + GE D++P F P G+ V +E G S F T L Sbjct: 65 P-QFKVLGEGKYGLRKMMRDYQSFLGEQA-DFFPGFEPADGEFVVRERGGGSSVFVGTTL 122 Query: 135 DFLLKQKGITHVIVVGLLANTCIESTARFAMELGYHVTLVRDATAAFSHDMMYAAHELNG 194 D L+ I + + G C+ES+ R A +LGY+ ++ DA+A ++ Sbjct: 123 DSYLRNNRIFDIYLAGFSLRQCVESSMRNAHDLGYNTNVIYDASAGYTRKQQDDFVAEIA 182 Query: 195 PTYAHSILTTTQVIA 209 P YA++I TT + +A Sbjct: 183 PFYANAI-TTQEFVA 196