BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0225.0009.p (1028 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1390 [M] COG0463 Glycosyltransferases involved in cell wall bi... 114 8e-25 alr3062 [M] COG0463 Glycosyltransferases involved in cell wall b... 85 7e-16 HI1578 [M] COG0463 Glycosyltransferases involved in cell wall bi... 84 2e-15 AGc4307 [M] COG0463 Glycosyltransferases involved in cell wall b... 84 2e-15 CAC2174 [M] COG0463 Glycosyltransferases involved in cell wall b... 84 2e-15 >PA1390 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Pae Pseudomonas aeruginosa Length = 344 Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 697 VVIVSFNYGHFVAEAVDSVLAQTFDNLEVIVVEGGSTEPLSREQTLALTRPKTTVVVQTE 756 +VI FN+G ++ A+DS+ Q+F + E+I+V+ GS +P + AL P T++ Q Sbjct: 1 MVIPCFNHGRYLRRALDSLARQSFQDFEIILVDDGSDDPSTLGLLEALQEPGMTILRQPN 60 Query: 757 PHQVGANRNFGISKARGKYICCLDADDLLKPTYIEKAVFLLE-TYGYDIVSSAMQQFGSS 815 A RN G+++ARG+YICCLDADD L TY+EK + LLE G + S +Q G Sbjct: 61 -RGPSAARNAGVARARGRYICCLDADDWLASTYLEKCLVLLEGNSGVRLAYSWVQLVGEE 119 Query: 816 DEKVGILG-EPVLADMLEGNHVLTCAVFRRSLWEKAGGYRDTDRAVTGHVYEDWLFWTQL 874 G P L N A+F R W GG+ + A +EDW FW L Sbjct: 120 HRLHRSAGFHPGLLRYF--NPFCVSAIFHRDDWLAVGGFDEAREA----QFEDWDFWIAL 173 Query: 875 AALGARIHNMTNDHLFLYRRHGPSLST 901 G R + LF +R+ G L T Sbjct: 174 VGCGVRGRLIREPLLFYHRQVGSRLET 200 >alr3062 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Nos Nostoc sp. PCC 7120 Length = 321 Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 16/216 (7%) Query: 693 PLVSVVIVSFNYGHFVAEAVDSVLAQTFDNLEVIVVEGGSTEPLSREQTLALTRPKTTVV 752 P VSVVI ++N ++ E ++SVL QT+ + EV+VV GS++ + E + P+ ++ Sbjct: 2 PKVSVVIPAYNAMPYLPETLESVLRQTYHDFEVVVVNDGSSDN-TEEWVSQILDPRLKLI 60 Query: 753 VQTEPHQVGANRNFGISKARGKYICCLDADDLLKPTYIEKAVFLLE---TYG--YDIVSS 807 Q GA RN GI A G+YI LDADD+ +PT + K V +L+ T G Y V+ Sbjct: 61 SQANQGLAGA-RNTGIVNASGEYIAFLDADDIWEPTKLAKQVSVLDENPTVGLVYTWVAY 119 Query: 808 AMQQFGSSDEKVGILGEPVLADMLEGNHVLTC---AVFRRSLWEKAGGYRDTDRAVTGHV 864 +Q S+ + E + L ++++ C A+ RR +EK G + DR + +V Sbjct: 120 IDEQGKSTGKIFKNQVEGYVWPQLTEHNIVECGSVALVRRVCFEKMGLF---DRNLGSYV 176 Query: 865 YEDWLFWTQLAALGARIHNMTNDHLFLYRRHGPSLS 900 EDW W ++A + + + L YR+ S S Sbjct: 177 -EDWDMWLRIAT--SYDFKVVKEALVYYRQRSNSAS 209 >HI1578 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Hin Haemophilus influenzae Length = 323 Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 119/241 (49%), Gaps = 22/241 (9%) Query: 693 PLVSVVIVSFNYGHFVAEAVDSVLAQTFDNLEVIVVEGGSTEPLSREQTLALTRPKTTVV 752 PLVSV++ ++N ++ E++ S++ QT++NLE+IV+ GST+ L+ +++ + Sbjct: 5 PLVSVIVCAYNAEQYIDESISSIINQTYENLEIIVINDGSTD-LTLSHLEEISKLDKRIK 63 Query: 753 VQTEPHQVG--ANRNFGISKARGKYICCLDADDLLKPTYIEKAVFLLE---------TYG 801 + + + +G + N G+ GKY +DADD+ KP++IEK V LE +Y Sbjct: 64 IISNKYNLGFINSLNIGLGCFSGKYFARMDADDIAKPSWIEKIVTYLEKNDHITAMGSYL 123 Query: 802 YDIVSSAMQQFGSSDEKVGILGEPVLADMLEGNHVLTCAVFRRSLWEKAGGYRDTDRAVT 861 IV GS + I P+L + + + + ++ +A YR+ + + Sbjct: 124 EIIVEKECGIIGSQYKTGDIWKNPLLHNDICEAMLFYNPIHNNTMIMRANVYRE-HKLIF 182 Query: 862 GHVY---EDWLFWTQLAALGARIHNMTN--DHLFLYRRHGPSLSTQTDLHGMPVHRKLIR 916 Y ED+ FW++++ LG + N + L YR HG S+ + +K+ R Sbjct: 183 NKDYPYAEDYKFWSEVSRLGC----LANYPEALVKYRLHGNQTSSVYNHEQNETAKKIKR 238 Query: 917 Q 917 + Sbjct: 239 E 239 >AGc4307 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 316 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 23/219 (10%) Query: 695 VSVVIVSFNYGHFVAEAVDSVLAQTFDNLEVIVVEGGSTEPLSREQTLALTRPKTTVVVQ 754 VS+VI N ++ EA++SVL Q EV+VV+ GST+ + ++ + P+ ++ + Sbjct: 17 VSIVIPVRNGERYIVEAIESVLLQGETIREVLVVDDGSTDATA-QKVEGFSDPRVKLLAR 75 Query: 755 TEPHQ-VGANRNFGISKARGKYICCLDADDLLKPTYIEKAVFLLETYGYDIVS--SAMQQ 811 + Q V A RNFG+S+ARG++ LDADD LKP I G D+V+ ++ Sbjct: 76 PQGRQGVSAVRNFGLSQARGEWTMFLDADDRLKPGAI--TALCAGISGPDVVAVYGDYER 133 Query: 812 FGSSDEKVGILG------EP---VLADMLEGNHVLTCAVF--RRSLWEKAGGYRDTDRAV 860 + K+G +P +L +L GN ++ + R +++ GG+ +T R Sbjct: 134 IDENGTKIGRRNLIRRREKPDGFILQSLLGGNFIVNGGIMLVRTRIFQDFGGFDETLRYA 193 Query: 861 TGHVYEDWLFWTQLAALGARIHNMTNDHLFLYRRHGPSL 899 EDW W +LAA G R + H+ YR H S+ Sbjct: 194 -----EDWYGWCRLAAAG-RFVYLPGCHVLDYRVHRTSV 226 >CAC2174 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Cac Clostridium acetobutylicum Length = 336 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 20/219 (9%) Query: 693 PLVSVVIVSFNYGHFVAEAVDSVLAQTFDNLEVIVVEGGSTEPLSREQTLALTRPKTTVV 752 P VS+V+ +N ++AEA++S+L QT+++ E I+V+ GST+ + + +V Sbjct: 5 PKVSIVMPVYNSERYLAEAIESILDQTYNDFEFIIVDDGSTDESYNIISSYANKDNRIIV 64 Query: 753 VQTEPHQVGANRNFGISKARGKYICCLDADDLLKPTYIEKAVFLLE-TYGYDIVSSAMQQ 811 + E + + N GI+ ARGKYI +DADD+ IEK LE DI+ + ++ Sbjct: 65 ISREHRGLVDSLNEGINIARGKYIARMDADDISINNRIEKQFEFLELNKDVDILGTRIEA 124 Query: 812 FGSSDEKVGILGEPVLADMLEGNHV-----LTCAV------FRRSLWEKAGGYR-DTDRA 859 FG DEK + + + ++ +CA+ F++ K GYR + D A Sbjct: 125 FGDIDEKQKTIYNSAFSIKFDSQNIEQVFLTSCAIPHPSVMFKKDSIVKLRGYRKEYDTA 184 Query: 860 VTGHVYEDWLFWTQLAALGARIHNMTNDHLFLYRRHGPS 898 ED+ W + G +I M ++ L YR H S Sbjct: 185 ------EDYDLWLRAIRNGYKIVRM-DECLIKYRVHNKS 216