BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0225.0008.p         (154 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF2568 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tra...   152   2e-37
Rv3781 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tra...   151   6e-37
MT3890 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tra...   151   6e-37
STM0723 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tr...   147   9e-36
Cgl0201 [GM] COG1134 ABC-type polysaccharide/polyol phosphate tr...   147   1e-35

>XF2568 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport
           system, ATPase component Xfa Xylella fastidiosa 9a5c
          Length = 246

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 102/146 (69%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           + DI LG DPE +G +NI LRG LLG+   EI++ +  I +F+ELG+++++P RTYS+GM
Sbjct: 99  LIDISLGTDPEATGRENIYLRGALLGMTKSEINRSVNEIIEFSELGNFIDMPLRTYSTGM 158

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
             RL F+V+T   P+ILLMDEW+  GD GF  KAE+RL   V+  ++LV+ASH++Q+   
Sbjct: 159 HLRLAFSVSTIVYPKILLMDEWLSVGDEGFKQKAEKRLSELVQATNILVVASHSKQLILN 218

Query: 121 WCEKAVWLDGGRVRAAGQIDEILSAY 146
            C + +WL+ G++R  G   E+ +AY
Sbjct: 219 TCNRVIWLEHGQIRMDGDAQEVCTAY 244


>Rv3781 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport
           system, ATPase component Mtu Mycobacterium tuberculosis
           H37Rv
          Length = 273

 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 71/146 (48%), Positives = 100/146 (68%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           +FD+G+G+DPE+SG +NI +RGL LG    ++   +  I +FTELG+YL +P RTYS+GM
Sbjct: 103 VFDLGIGMDPEISGYENIIIRGLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGM 162

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
             RL   V T   PEILL+DE I A DA FL KA+ RL++ VE + +LV ASH+ +    
Sbjct: 163 RVRLAMGVVTSIDPEILLLDEGIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLAR 222

Query: 121 WCEKAVWLDGGRVRAAGQIDEILSAY 146
            C+ A+W+D G +R AG I+E++ AY
Sbjct: 223 LCKTAIWIDHGVIRLAGGIEEVVRAY 248


>MT3890 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport
           system, ATPase component MtC Mycobacterium tuberculosis
           CDC1551
          Length = 273

 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 71/146 (48%), Positives = 100/146 (68%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           +FD+G+G+DPE+SG +NI +RGL LG    ++   +  I +FTELG+YL +P RTYS+GM
Sbjct: 103 VFDLGIGMDPEISGYENIIIRGLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGM 162

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
             RL   V T   PEILL+DE I A DA FL KA+ RL++ VE + +LV ASH+ +    
Sbjct: 163 RVRLAMGVVTSIDPEILLLDEGIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLAR 222

Query: 121 WCEKAVWLDGGRVRAAGQIDEILSAY 146
            C+ A+W+D G +R AG I+E++ AY
Sbjct: 223 LCKTAIWIDHGVIRLAGGIEEVVRAY 248


>STM0723 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport
           system, ATPase component Sty Salmonella typhimurium LT2
          Length = 236

 Score =  147 bits (371), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 64/137 (46%), Positives = 99/137 (72%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           + D  +G+D EL+GL+NIKLRGL LGL  +EI  +   + +F+ELGD++++P RTYSSGM
Sbjct: 98  LIDPMMGMDGELTGLENIKLRGLFLGLSKNEIKNITEDVIEFSELGDFIKIPVRTYSSGM 157

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
           + RL F+++T   PEILLMDEW+  GD+ F  KAE RL SF+  A ++V+A+H++++ ++
Sbjct: 158 VLRLGFSISTAINPEILLMDEWMSVGDSDFKRKAEMRLNSFISKAGIMVMATHDDELAKS 217

Query: 121 WCEKAVWLDGGRVRAAG 137
            C K + L+ G + + G
Sbjct: 218 VCNKFIRLEHGEIVSKG 234


>Cgl0201 [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport
           system, ATPase component Cgl Corynebacterium glutamicum
          Length = 263

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 69/146 (47%), Positives = 97/146 (66%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           +FD+G+G+DPE+SG +NI +RGL LG    ++   +  I  FTELG+YL +P RTYS+GM
Sbjct: 98  VFDLGVGMDPEISGYENIIIRGLFLGQTRKQMKAKMEEIADFTELGEYLSMPLRTYSTGM 157

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
             RL   V T   PEILL+DE I A DA F+AKA  RL++ VE + +LV ASH+      
Sbjct: 158 RIRLALGVVTSIEPEILLLDEGIGAVDAAFMAKARDRLQALVERSGILVFASHSNDFLAQ 217

Query: 121 WCEKAVWLDGGRVRAAGQIDEILSAY 146
            C  A+W+D G++R AG + +++ AY
Sbjct: 218 LCNTALWVDHGQIREAGLVPDVVEAY 243