BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0224.0049.p         (568 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

aq_765 [M] COG1807 4-amino-4-deoxy-L-arabinose transferase and r...   106   2e-22
CC0209 Non COG                                                         99   3e-20
AGc4035 [M] COG1807 4-amino-4-deoxy-L-arabinose transferase and ...    84   9e-16

>aq_765 [M] COG1807 4-amino-4-deoxy-L-arabinose transferase and related
           glycosyltransferases of PMT family Aae Aquifex aeolicus
          Length = 480

 Score =  106 bits (264), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 209/490 (42%), Gaps = 34/490 (6%)

Query: 7   AMRLVYA--HALDLRTDEAYYWTWSKENVLSFLDHPPMVAWFIRFGTAILGDTNLGVRLG 64
             R++Y   + +DL  +EA YW WS+   LS+   PPMVA+     T + G+T LGVR+ 
Sbjct: 14  VFRVLYVLFYPVDLSPEEAQYWDWSRHLDLSYYSKPPMVAYMNFLSTHVFGNTELGVRIN 73

Query: 65  GIVAMLATQLLLADIVRRVTANNVRAVMLALLLPEAALYYGLLMAKVAPDTALIPFSVAM 124
            I+      L+     +++ +  V  V  A ++P     + +       D+ LI F    
Sbjct: 74  AILLSFLLSLITYFFAKKLFSEKVAFV--ASVVPNLFTGFSINSVLFTTDSPLIFFWALS 131

Query: 125 LWSLVRLAQSGDGRWWLAAGLFAGLALLSKFTAIMFAPAVLAFALVPDWRWRWLRSPYPY 184
           + S     +      W+  G+F+GLA LSK+ A+   P  + +  +   +   L+    +
Sbjct: 132 VISFYFAIEKNTLSLWILTGVFSGLAFLSKYPAVFLLPLGILYLYLT--KKELLKDLKIF 189

Query: 185 LAALIAIVVFAPVLIWNAGHDWASFRFQAVRATAERAF-TLRTVGEFVGMQFGLVGFVLL 243
            + L+A ++  PVLIWNA HD+ SF+  +  A     F    T  E++G Q      +LL
Sbjct: 190 SSVLVAFLIALPVLIWNAKHDFISFKHVSNLAQKHAHFPNFSTFFEYLGGQ-----VLLL 244

Query: 244 PVTLFGTALTAW-RGYRKREPVAILLATAVLVPFIYFLWKSLTLRVGDTWPMFLWPAGLA 302
            V  F   L  W R +++R    I L T  L  F++F + SL  RV   W  F +     
Sbjct: 245 SVIPFFFVLYGWVRTFKERNKRLIFLTTFSLPVFLFFAFLSLKKRVYANWAGFGYYTASI 304

Query: 303 AIAINVTRMPFEGWSVGLVKSTVYWARTAITTGIVFVVCVFLYYMFAPWNLI-GRTDPIG 361
             A    + P     + L+ S       A  T ++    +F Y      NL+  + DP  
Sbjct: 305 LFAYYFLKSPKSLKFLTLILS-------AFLTLLLHFTPLFDY--LGLRNLLPPKRDPAK 355

Query: 362 TEAGYDVVAARALAQVEATGATWVATTDYRTYAMLRWLLRG--KVTVIEINERGRFQGFA 419
              G++ +          TG   + +T Y+  A L + + G  +  V  +N   ++  + 
Sbjct: 356 LLVGWEDLGKE--VGRFYTGKELIFSTAYQISAELAFYVPGNPRTYVFHVNRYTQYYLWR 413

Query: 420 DPGMSKIRDNAGIYV--GREPENNLPLWSETTAVRQPLERVTRNWRGMVMDTYSLEKISG 477
           + G+   +    ++V  G  P+  +     +   ++ L+ V   WR  V+  + + K+  
Sbjct: 414 E-GLKNFKGKDAVFVSYGGVPKEVM----RSFEGKEFLKEVRVVWRNQVVRKFYIYKLKN 468

Query: 478 WTPDLSPPPD 487
           +  +    P 
Sbjct: 469 FKGEFYENPK 478


>CC0209 Non COG
          Length = 524

 Score = 99.0 bits (245), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 143/306 (46%), Gaps = 26/306 (8%)

Query: 1   VIVAMTAMRL--VYAHALDLRTDEAYYWTWSKENVLSFLDHPPMVAWFIRFGTAILGDTN 58
           +I  +T +RL  ++   L+L  DEA YW WS+E    +   PPM+AW I + T  +GDT 
Sbjct: 23  MIGGLTIVRLAALFLTPLELYPDEAQYWLWSRELAFGYFSKPPMIAWLI-WATTQIGDTE 81

Query: 59  LGVRLGGIVAMLATQLLLADIVRRVTANNVRAVMLAL--LLPEAALYYGLLMAKVAPDTA 116
             VRL       AT L++  I RR+          A+  L+P   L  GL    +A D  
Sbjct: 82  AWVRLSAPFLHGATALVIHRIARRLYGGWAGLAAAAIYSLMPGVVLSSGL----IATDAP 137

Query: 117 LIPFSVAMLWSLVRLAQSGDGRWW---LAAGLFAGLALLSKFTAIM-FAPAVLAFALVPD 172
           L+ F    +W+ V L  +   R +      G   GLA LSK+ A+       L FA+  +
Sbjct: 138 LLFFLSLTVWAYVSLPDASARRRYALAAGMGAALGLAFLSKYAAVYALGSVALHFAISSE 197

Query: 173 WRWRWLRSPYPYLAALIAI---VVFAPVLIWNAGHDWASFRFQAVRA--TAERAFTLRTV 227
            R RW     P L  L  +   +V AP L+WNA + +++ +  A  A   A + F +R +
Sbjct: 198 ARRRW----SPALVGLFIVAFALVLAPNLLWNAANQFSTVKHTAANANWNAHQLFNVREL 253

Query: 228 GEFVGMQFGLVGFVLLPVTLFGTALTAWRGY-RKREPVAILLATAVLVPFIYFLWKSLTL 286
            EFVG QFG+ G V   V L G A+  W G  RK +   +LL    L P I    ++   
Sbjct: 254 IEFVGSQFGVFGPVPFAV-LIGGAI--WLGVKRKLQSPDLLLLCFALPPLIVVAGEAFVS 310

Query: 287 RVGDTW 292
           R    W
Sbjct: 311 RANANW 316


>AGc4035 [M] COG1807 4-amino-4-deoxy-L-arabinose transferase and related
           glycosyltransferases of PMT family Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 468

 Score = 84.0 bits (206), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 123/255 (48%), Gaps = 35/255 (13%)

Query: 5   MTAMRLVYA--HALDLRTDEAYYWTWSKENVLSFLDHPPMVAWFIRFGTAI-LGDTNLGV 61
           MT +R+V    +  DL  DEA YW W +E  L     PP++ W IR  T +  G+    V
Sbjct: 1   MTVLRVVGLAFNRTDLFVDEAQYWLWGREMALGAYSKPPLIGWLIRAATILGGGEGTFQV 60

Query: 62  RLG-----GIVAMLATQLLLADIVRRVTANNVRAVMLALLLPEAALYYGLLMAKVAPDTA 116
           RL      G+ A  A  L+L  +V  +   ++ A ++ L LP  A+  G L+  ++ DT 
Sbjct: 61  RLAAPVVHGVAA--AAILVLGRMVYDIRLASL-AALVYLTLP--AVTLGSLL--ISTDTP 113

Query: 117 LIPFSVAMLWSLVRLAQS-----GDGRWWLAAGLFAGLALLSKFTAIMFAPAVLAFA-LV 170
           ++ F V  + S+ +LAQ+     G   W +A GL  GL L+SK+  I F P  +A   L 
Sbjct: 114 MMLFIVLSMISVRKLAQARAESRGALGWSIALGLCFGLGLMSKYAMIYFLPCFIAAGWLC 173

Query: 171 PDWRWRWLRSPYPYLAALIAIVVFAPVLIWNAGHDWASFRFQAVRATAERA------FTL 224
             WR R LR     +A LI   V AP L WNA HD     F   R TA+ A        +
Sbjct: 174 EAWRIR-LRD--AAIAVLICGAVIAPNLWWNAAHD-----FMTARHTADNANWHGVQLKV 225

Query: 225 RTVGEFVGMQFGLVG 239
            +  EF   Q G+VG
Sbjct: 226 GSALEFFFSQAGVVG 240