BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0222.0003.p         (131 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll9357 [S] COG3742 Uncharacterized protein conserved in bacteri...   120   8e-28
CC0639 Non COG                                                        113   9e-26
SMc00900 [S] COG3742 Uncharacterized protein conserved in bacter...    96   2e-20
SMc02715 [S] COG3742 Uncharacterized protein conserved in bacter...    92   4e-19
Rv0624 [S] COG3742 Uncharacterized protein conserved in bacteria...    87   1e-17

>mll9357 [S] COG3742 Uncharacterized protein conserved in bacteria Mlo
           Mesorhizobium loti
          Length = 131

 Score =  120 bits (301), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/131 (47%), Positives = 83/131 (63%)

Query: 1   MFIDASALTAMLTDEDEARELLARVQQAATRLTSPLAVWEAAIAVARVLDLSIAEAAESV 60
           MF+DASA+ A++ DE++   L AR+ QA +   SP+ V+EA   +AR     I EA E V
Sbjct: 1   MFVDASAIIAIIGDEEDGLALAARLGQAGSVRVSPIVVYEAVAGLARKRACPIEEAEELV 60

Query: 61  ESYLALMEIRMVNVAPETARIALDAFDRYGKGRHPARLNFGDCFAYACARHLGEPLMFKG 120
              L  +  +++ +     + A+ AF R+GKGRH A LN GDCFAYACAR  G PL+FKG
Sbjct: 61  TLMLDEIPAQIIEINGAIGQEAIRAFHRFGKGRHKADLNMGDCFAYACARLYGIPLLFKG 120

Query: 121 SDFPQTDIEAA 131
           +DF  TDIE A
Sbjct: 121 NDFVHTDIEVA 131


>CC0639 Non COG
          Length = 131

 Score =  113 bits (283), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 79/131 (60%)

Query: 1   MFIDASALTAMLTDEDEARELLARVQQAATRLTSPLAVWEAAIAVARVLDLSIAEAAESV 60
           MF+DASA TAML +E EA     ++  A    TS +A WE   AVAR  + +I   A+ +
Sbjct: 1   MFVDASAWTAMLLEEPEAEAFREKIADAVEVTTSAIANWETIRAVARQTNRNIEAVAQEL 60

Query: 61  ESYLALMEIRMVNVAPETARIALDAFDRYGKGRHPARLNFGDCFAYACARHLGEPLMFKG 120
            +     E +++ + P     AL+A  R+GKG HPARLN GDCFAYACA     PL++KG
Sbjct: 61  RALQLYAEAQVLLIGPAEQTAALEAHARFGKGVHPARLNMGDCFAYACATLRNTPLLYKG 120

Query: 121 SDFPQTDIEAA 131
            DF QTD+ AA
Sbjct: 121 DDFSQTDVMAA 131


>SMc00900 [S] COG3742 Uncharacterized protein conserved in bacteria Sme
           Sinorhizobium meliloti
          Length = 128

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 77/132 (58%), Gaps = 5/132 (3%)

Query: 1   MFIDASALTAMLTDEDEARELLARVQQAATRLTSPLAVWEAAIAVARVLDLSIAEAAES- 59
           M ID SA+ A+  +E EA     ++     RL S     EAA+    V++  + EAA + 
Sbjct: 1   MVIDTSAIAAIAFNEQEAGSFREKIADDPVRLISAATALEAAM----VIETRLGEAAGAE 56

Query: 60  VESYLALMEIRMVNVAPETARIALDAFDRYGKGRHPARLNFGDCFAYACARHLGEPLMFK 119
           ++ +L    + +V V  E    A  A+ R+GKGRHPA LNFGDCF+YA A    EPL+FK
Sbjct: 57  LDLWLYKANVEIVAVTAEHMDQARRAWRRFGKGRHPAGLNFGDCFSYALAFLTNEPLLFK 116

Query: 120 GSDFPQTDIEAA 131
           GSDF QTDI AA
Sbjct: 117 GSDFSQTDIPAA 128


>SMc02715 [S] COG3742 Uncharacterized protein conserved in bacteria Sme
           Sinorhizobium meliloti
          Length = 142

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 12/139 (8%)

Query: 2   FIDASALTAMLTDEDEARELLARVQQAATRL-TSPLAVWEAAIAVARVLDLS-------- 52
           F+D S + A+L +E    EL  R+  A  +L  SPL  +EA  A+ R+  ++        
Sbjct: 3   FVDGSVIVAILNEEPGFEELEKRLSDADGKLCVSPLVRFEAVAALTRLRIIATKGKADRS 62

Query: 53  --IAEAAESVESYLALMEIRMVNVAPETARIALDAFDRYGK-GRHPARLNFGDCFAYACA 109
             I EA E V+S++  +    V +   T   ALDA  RYGK   HPA LN GDCFAYA A
Sbjct: 63  DLIGEARELVDSFIQALSASEVTIDSHTGVRALDAMARYGKVAGHPAALNLGDCFAYAAA 122

Query: 110 RHLGEPLMFKGSDFPQTDI 128
           +  G  L++KG+DF QTD+
Sbjct: 123 KESGLTLIYKGNDFSQTDL 141


>Rv0624 [S] COG3742 Uncharacterized protein conserved in bacteria Mtu
           Mycobacterium tuberculosis H37Rv
          Length = 131

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 72/136 (52%), Gaps = 19/136 (13%)

Query: 1   MFIDASALTAMLTDEDEARELLARVQQAATRLTSPLAVWEAAIAV--------ARVLDLS 52
           M ID SAL AML+DE +A    A V+    RL S  +  E A+ +         R LDL 
Sbjct: 1   MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLW 60

Query: 53  IAEAAESVESYLALMEIRMVNVAPETARIALDAFDRYGKGRHPARLNFGDCFAYACARHL 112
           +  AA           + +V V  + A  A  A+  YGKGRH A LN+GDCF+Y  A+  
Sbjct: 61  LHRAA-----------VDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKIS 109

Query: 113 GEPLMFKGSDFPQTDI 128
           G+PL+FKG DF  TDI
Sbjct: 110 GQPLLFKGEDFQHTDI 125