BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0217.0034.p (312 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI1833 [G] COG0524 Sugar kinases, ribokinase family Bme Brucel... 199 6e-51 AGc706 [G] COG0524 Sugar kinases, ribokinase family Atu Agrobact... 175 1e-43 SMc02164 [G] COG0524 Sugar kinases, ribokinase family Sme Sinorh... 173 4e-43 mll7580 [G] COG0524 Sugar kinases, ribokinase family Mlo Mesorhi... 173 4e-43 PA2344 [G] COG0524 Sugar kinases, ribokinase family Pae Pseudomo... 130 3e-30 >BMEI1833 [G] COG0524 Sugar kinases, ribokinase family Bme Brucella melitensis Length = 308 Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 120/309 (38%), Positives = 171/309 (55%), Gaps = 5/309 (1%) Query: 1 MLLSCGDALIDFLPSKTADGREALTPAVGGSCLNIAIGSARLDVPTGFVGGISTDTFGRM 60 M+L CG+ALID LP +T G A P GGS N AI RL VPTGF GIS+D FG + Sbjct: 1 MILCCGEALIDMLPRETTGGETAFQPFAGGSVFNTAIALGRLGVPTGFFSGISSDFFGDV 60 Query: 61 IADHAAESGVDLSRATRSNRQATLAFARVTGTETQYAFYDADTASRNWTYRRDAVALD-G 119 + D A S VD S A SNR TLAF R+ + +YAFYD +TA R + R D +D Sbjct: 61 LRDTLARSNVDYSFAAISNRPTTLAFVRLVDGQARYAFYDENTAGRMLS-RNDMPYVDET 119 Query: 120 ITCLHTGSTTLVHDKGAAETLALIEDARPNVTISLDPNCRPNLVRDEDAYRARMLAFCGK 179 I+ + G +L+ + + L+ PN + LDPN R NL+ + + R+ Sbjct: 120 ISAMLFGCISLISEPCGSVYETLLAREAPNRVMFLDPNIRANLITVRETHLTRVKRMIAL 179 Query: 180 ADIVKMSDVDFAYLFGDEAYAARAEALMSGGASLVVITRGNDGACAW-HRKTGPIAAEAP 238 ADIVK+SD D + ++ A + G LVVIT+G GA A+ + T P+ Sbjct: 180 ADIVKLSDEDLDWFGEKGSHDEIAAEWLKLGPKLVVITKGAHGAVAYTNHATVPVPGVK- 238 Query: 239 VVNVVDTIGAGDSFQAALLAALHRLGRIARPRLGDVSAAELTRALSFACKCAAFTCTRPG 298 V+VVDT+GAGD+ A +LA+LH G + + L ++S ++ A++ + A T +R G Sbjct: 239 -VDVVDTVGAGDTVNAGILASLHSQGLLTKDALANLSEDQIHSAVALGVRAATVTVSRAG 297 Query: 299 ADPPRSREL 307 A+PP + E+ Sbjct: 298 ANPPWAHEM 306 >AGc706 [G] COG0524 Sugar kinases, ribokinase family Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 313 Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 116/311 (37%), Positives = 168/311 (54%), Gaps = 9/311 (2%) Query: 1 MLLSCGDALIDFLPSKTADGREALTPAVGGSCLNIAIGSARLDVPTGFVGGISTDTFGRM 60 M+L CG+ALID LP +T G P GG+ N AI RL VP+ F G+S D G + Sbjct: 6 MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDI 65 Query: 61 IADHAAESGVDLSRATRSNRQATLAFARVTGTETQYAFYDADTASRNWTYRRDAVALDGI 120 + + S VD S +R T+AF ++ YAFYD +TA R T + AL G Sbjct: 66 LRETLRASKVDFSYCATLSRPTTIAFVKLVDGHATYAFYDENTAGRMIT-EAELPAL-GA 123 Query: 121 TC--LHTGSTTLVHDKGAAETLALIEDARPNVTISLDPNCRPNLVRDEDAYRARMLAFCG 178 C LH G+ +L+ + + AL+ ISLDPN RP ++++ ++ AR+ Sbjct: 124 DCEALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRPGFIQNKQSHMARIRRMAA 183 Query: 179 KADIVKMSDVDFAY--LFGDEAYAARAEALMSGGASLVVITRGNDGACAWHRKTGPIAAE 236 +DIVK SD D A+ L GDE AR + GA LVV+TRG GA + + Sbjct: 184 MSDIVKFSDEDLAWFGLEGDEDTLAR--HWLHHGAKLVVVTRGAKGAVGYSANL-KVEVA 240 Query: 237 APVVNVVDTIGAGDSFQAALLAALHRLGRIARPRLGDVSAAELTRALSFACKCAAFTCTR 296 + V VVDT+GAGD+F A +LA+L G + + ++ +S ++ +AL+ K AA T +R Sbjct: 241 SERVEVVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSR 300 Query: 297 PGADPPRSREL 307 GA+PP + E+ Sbjct: 301 AGANPPFAHEI 311 >SMc02164 [G] COG0524 Sugar kinases, ribokinase family Sme Sinorhizobium meliloti Length = 308 Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 110/307 (35%), Positives = 159/307 (51%), Gaps = 1/307 (0%) Query: 1 MLLSCGDALIDFLPSKTADGREALTPAVGGSCLNIAIGSARLDVPTGFVGGISTDTFGRM 60 M++ CG+ALID LP +T G A P GG+ N A+ RL VPTGF G+S D FG + Sbjct: 1 MIVCCGEALIDMLPRETTAGESAFAPYAGGAIFNTAVALGRLGVPTGFFTGLSDDMFGDI 60 Query: 61 IADHAAESGVDLSRATRSNRQATLAFARVTGTETQYAFYDADTASRNWTYRRDAVALDGI 120 + + VD + TLAF ++ YAF+D +TA R T D Sbjct: 61 LRATLKAANVDFAPCATLPLHTTLAFVKLVDGHASYAFFDENTAGRMITAEHLPALGDFC 120 Query: 121 TCLHTGSTTLVHDKGAAETLALIEDARPNVTISLDPNCRPNLVRDEDAYRARMLAFCGKA 180 LH G+ +L+ + + AL+ IS DPN RP ++D +A+ RM + Sbjct: 121 EALHFGAISLIPEPCGSTYEALMAREHEKRVISFDPNIRPGFIKDREAHVGRMNRMAAMS 180 Query: 181 DIVKMSDVDFAYLFGDEAYAARAEALMSGGASLVVITRGNDGACAWHRKTGPIAAEAPVV 240 DIVK SD D A+ + ++ A A + G LV+ITRG DGA + + + V Sbjct: 181 DIVKFSDEDLAWFGMEGSHDALAAEWLKRGPKLVLITRGADGAVGY-TNGHKVEVASERV 239 Query: 241 NVVDTIGAGDSFQAALLAALHRLGRIARPRLGDVSAAELTRALSFACKCAAFTCTRPGAD 300 VVDT+GAGD+F A +LA+L + + R+ ++ + +AL+ A K AA T +R GA+ Sbjct: 240 EVVDTVGAGDTFDAGVLASLKFNNLLTKERVASLTDEAIRQALTLAAKAAAVTVSRAGAN 299 Query: 301 PPRSREL 307 PP EL Sbjct: 300 PPWRHEL 306 >mll7580 [G] COG0524 Sugar kinases, ribokinase family Mlo Mesorhizobium loti Length = 307 Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 107/307 (34%), Positives = 154/307 (50%), Gaps = 1/307 (0%) Query: 1 MLLSCGDALIDFLPSKTADGREALTPAVGGSCLNIAIGSARLDVPTGFVGGISTDTFGRM 60 M+L CG+ALID LP T G A P VGG+ N AI RL P GF G+S+D FG Sbjct: 1 MILCCGEALIDMLPRITTQGEPAFAPYVGGAVFNTAIALGRLGAPAGFFSGLSSDLFGGQ 60 Query: 61 IADHAAESGVDLSRATRSNRQATLAFARVTGTETQYAFYDADTASRNWTYRRDAVALDGI 120 D S V + A S R TLAF R+T + Y FYD +TA R T + I Sbjct: 61 FRDALGASKVSSTYAHTSPRPTTLAFVRLTNGQATYTFYDENTAGRMLTIDDLPSLGNEI 120 Query: 121 TCLHTGSTTLVHDKGAAETLALIEDARPNVTISLDPNCRPNLVRDEDAYRARMLAFCGKA 180 + G+ +L+ + + + + LDPN RPN + D+ + R+ A Sbjct: 121 EAMLFGAISLISEPAGGAYEEFMRREHASRVMMLDPNIRPNFIPDKAKHLRRIREMMAMA 180 Query: 181 DIVKMSDVDFAYLFGDEAYAARAEALMSGGASLVVITRGNDGACAWHRKTGPIAAEAPVV 240 DIVK+SD D + ++ + G L+V+T G++GA + K + V Sbjct: 181 DIVKLSDEDLHWFGEAGSHEDVIRNWLDRGPKLIVVTHGSEGAVGY-TKDHTVTVMPEKV 239 Query: 241 NVVDTIGAGDSFQAALLAALHRLGRIARPRLGDVSAAELTRALSFACKCAAFTCTRPGAD 300 VVDT+GAGD+F A +LA+LH G + + +G + + +AL+ K AA T +R GA+ Sbjct: 240 EVVDTVGAGDTFNAGILASLHEQGLLTKAAIGGLPQDAIRKALALGAKAAAVTVSRAGAN 299 Query: 301 PPRSREL 307 PP E+ Sbjct: 300 PPWRHEI 306 >PA2344 [G] COG0524 Sugar kinases, ribokinase family Pae Pseudomonas aeruginosa Length = 310 Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 110/314 (35%), Positives = 142/314 (45%), Gaps = 11/314 (3%) Query: 1 MLLSCGDALIDF--LPSKTADGREALTPAVGGSCLNIAIGSARLDVPTGFVGGISTDTFG 58 M L CG+AL D L S T GGS N+A+G RL V GG+S+D G Sbjct: 1 MYLVCGEALFDVFSLESAARSNELGFTAIAGGSPFNVAVGLRRLGVEAALFGGLSSDYLG 60 Query: 59 RMIADHAAESGVDLSRATRSNRQATLAFARVTGT-ETQYAFYDADTASRNWTYRRDAVAL 117 + E GVD S+ TLA + + QY F A R L Sbjct: 61 ARLRRVLEEEGVDCGFLVPSDAPTTLAMVGLDASGSAQYQFRGEGCADRQVRLEH-LPTL 119 Query: 118 DG-ITCLHTGSTTLVHDKGAAETLALIEDARPNVTISLDPNCRPNLVRDEDAYRARMLAF 176 DG I LH GS TLV A LAL+ +SLDPN R + D D +R R+ AF Sbjct: 120 DGRIRGLHVGSYTLVVTPVADTLLALVRRESGRRLVSLDPNVRLDPQPDIDLWRRRVEAF 179 Query: 177 CGKADIVKMSDVDFAYLFGDEAYAARAEALMSGGASLVVITRGNDGA---CAWHRKTGPI 233 A ++K S+ D A L+ A ++ LV +T G GA C + P Sbjct: 180 ASHAHLIKASEEDLALLYPGRDPGEVARGWLNPRCRLVFVTHGGAGASVHCTHGSWSRPA 239 Query: 234 AAEAPVVNVVDTIGAGDSFQAALLAALHRLGRIARPRLGDVSAAELTRALSFACKCAAFT 293 P+ DT+GAGD+FQAA LA L RL + L +S + L+FA + AA T Sbjct: 240 DTALPLR---DTVGAGDTFQAATLAYLRRLDADSPAGLAALSREAIDAMLAFAIRAAAVT 296 Query: 294 CTRPGADPPRSREL 307 C+R G D P + EL Sbjct: 297 CSRVGPDLPFAHEL 310