BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0217.0033.p         (361 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll3093 [CR] COG0604 NADPH Mlo Mesorhizobium loti                     100   7e-21
BMEII0979 [C] COG1069 Ribulose kinase Bme Brucella melitensis          96   2e-19
AGl1075 [C] COG1069 Ribulose kinase Atu Agrobacterium tumefacien...    63   1e-09
YPO3637 [C] COG1069 Ribulose kinase Ype Yersinia pestis                61   5e-09

>mll3093 [CR] COG0604 NADPH Mlo Mesorhizobium loti
          Length = 348

 Score =  100 bits (248), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 4/181 (2%)

Query: 95  HGVNGKTIVXSMPVGNEGAGVVIRTGSSDAAKALMGRTVAMIGG----AMYAQYRTLRVN 150
            G  G+  V   P G EG G ++  G    AK+L+G+ VA   G      +A+Y      
Sbjct: 69  KGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAA 128

Query: 151 ECLPLPDGTTPAEGASCFVNPLTALGMTETMRREGHKALVHTAAASNLGQMLNKICLKDG 210
            C+PL D     +GA+  VNPLTA+ M + +++EG KA V TA AS L +++  +  ++G
Sbjct: 129 ACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEG 188

Query: 211 IGLVNIVRNKEQADILHKIGAKHVVDSSAPDFMDKLTGALVETGATIAFDAIGGXLVRQI 270
              +  VR  EQ  +L  IGA HV++  APDF   L   +      I  DA+ G L   I
Sbjct: 189 FRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPLASAI 248

Query: 271 M 271
            
Sbjct: 249 F 249


>BMEII0979 [C] COG1069 Ribulose kinase Bme Brucella melitensis
          Length = 538

 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 1/99 (1%)

Query: 7   EGVDVIEYLERRILARSGNAGAAALLARDVHVLPEFLGNRSPYADPGSRAAIAGLDLDTD 66
           +G  + + L   + AR G     A++  D+HV+PEFLGNR+P+ADP +RA IAGLDLDT 
Sbjct: 349 QGKGLADSLAAEVEARGGPE-KTAMIVGDIHVVPEFLGNRAPFADPDARAVIAGLDLDTG 407

Query: 67  VSALERLFIAGLCGLAYGLADVIDALQAHGVNGKTIVXS 105
           + +L  L++AGLCGL YG+  +I+A +A G+   TIV S
Sbjct: 408 MDSLAALYLAGLCGLGYGVRQIIEAQRAKGIVTDTIVVS 446



 Score = 63.5 bits (153), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 266 LVRQIMADTTGYTVALPQTQEPVLLGAAMLGAVASGAYNSINAAMAGMSALGRLSEPTRP 325
           LVRQ++AD TG  V    + EPVLLG+AMLGAVASGAY  +  AM  MS LG  + P   
Sbjct: 454 LVRQVLADATGLVVTASTSPEPVLLGSAMLGAVASGAYPDLVTAMQVMSELGARNRPD-A 512

Query: 326 ELADFHRKKRRVHKMLRELDRDSR 349
             A +H  +     +L+   R  R
Sbjct: 513 RRAKWHDHRFEAFMLLQATARKIR 536


>AGl1075 [C] COG1069 Ribulose kinase Atu Agrobacterium tumefaciens strain
           C58 (Cereon)
          Length = 536

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 2/105 (1%)

Query: 247 TGALVETGATIAFDAIGGXLVRQIMADTTGYTVALPQTQEPVLLGAAMLGAVASGAYNSI 306
            GA VET  +++  A    L RQ++AD TG  V L + +EPVLLG+AMLGAVA+G Y  +
Sbjct: 431 NGAPVET-ISVSGGAGAHPLARQLLADATGLPVELTECEEPVLLGSAMLGAVAAGTYPDL 489

Query: 307 NAAMAGMSALGRLSEPTRPELADFHRKKRRVHKMLRELDRDSREA 351
            AAM  MS +   + P  P+    H+ +      L+   R  R A
Sbjct: 490 MAAMPAMSRIDSSAMPD-PDFQKIHQARYDAFLALQNAARAIRSA 533


>YPO3637 [C] COG1069 Ribulose kinase Ype Yersinia pestis
          Length = 545

 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 51/102 (50%)

Query: 4   AKREGVDVIEYLERRILARSGNAGAAALLARDVHVLPEFLGNRSPYADPGSRAAIAGLDL 63
           AK +G  + E L   +   +G     A L  D+H+LP F GNRSP A+P     I GL L
Sbjct: 346 AKNKGETIYEALNYILRQMAGEPENIAFLTNDIHMLPYFHGNRSPRANPNLTGIITGLKL 405

Query: 64  DTDVSALERLFIAGLCGLAYGLADVIDALQAHGVNGKTIVXS 105
            T    +   ++A +  LA G   +I+ +  +G N  T++ S
Sbjct: 406 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMAS 447