BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0214.0053.p         (68 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll6374 [L] COG0582 Integrase Mlo Mesorhizobium loti                   65   3e-11

>mll6374 [L] COG0582 Integrase Mlo Mesorhizobium loti
          Length = 284

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 39/48 (81%)

Query: 1  MKPACNVGTLIERFFTERLMRQRNVSANTIASHRDTFRLLFLFAQVQL 48
          M  + ++  LIER+FT+RLMR R VS+NTIAS+RDTFRLLF FAQ +L
Sbjct: 1  MSASNDLAVLIERWFTDRLMRHRGVSSNTIASYRDTFRLLFAFAQTRL 48