BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0214.0017.p         (279 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl49 [L] COG4584 Transposase and inactivated derivatives Atu Ag...   112   6e-25
mll6092 Non COG                                                        61   3e-09
MA1057 [L] COG4584 Transposase and inactivated derivatives Mac M...    60   6e-09
MA3326 [L] COG4584 Transposase and inactivated derivatives Mac M...    60   6e-09
MA2738 [L] COG4584 Transposase and inactivated derivatives Mac M...    60   6e-09

>AGl49 [L] COG4584 Transposase and inactivated derivatives Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 498

 Score =  112 bits (281), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 7/254 (2%)

Query: 1   MCSHYLVDPVACTPASGWEKGQVENQVGLVRERFFTPRLRFKNLDELNAWLLDKCITYAK 60
             SHYL+      P  G +KG VE  VG  R  F  P  +F   +  N WL ++C    +
Sbjct: 213 FLSHYLIRDRYGRPGKGNDKGNVEGLVGYARRNFMVPIPQFPTWEAFNVWLEEQCRKRQR 272

Query: 61  AHRHPELVDQTIWDVFE--VERPRLVPYAGRFDGFHAVTASVSKTCLVRFDNNKYSVAAS 118
                E   +TI +  +  +   R++P A  FD        V+   L R+  N YSV  +
Sbjct: 273 DKLRGE--SETIGERLQRDLAAMRMLP-ASPFDACDHAGVKVTAQSLARYKTNDYSVPVA 329

Query: 119 AVGRPVEVQAYADRIVIRQDGRIVAEHQRSFGRGDTVYDPWHYVPVLARNPGALRNGAPF 178
              + V V+ Y + +VI   G I+A H RS+ R D V+DP HY+P++ +   +L   AP 
Sbjct: 330 YGHQDVWVRGYVNEVVIGCRGEIIARHPRSWDREDVVFDPVHYLPLIEQKINSLDQAAPL 389

Query: 179 KDWVLPAAIERIRRKLAS--IDDGNRQMVDILNAVLTDGLPAVEAACAEALSHSVHSADV 236
           + W LP     +RR +       G R+ V +L  + +  L  + AA  +AL       D 
Sbjct: 390 QGWDLPEEFATLRRLMEGRMAKHGRREYVQVLRLLESFELADLHAAVKQALQLGAIGFDA 449

Query: 237 VLNILARQREPAPP 250
           V +++  + E  PP
Sbjct: 450 VKHLILCRVERRPP 463


>mll6092 Non COG
          Length = 161

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 40  RFKNLDELNAWLLDKCITYAKAHRHPELVDQTIWDVFEVERPRLVPYAGRFDGFHAVTAS 99
           R   L+ LN WL  +C    +   H  L   TI D+   E   L+P    FDGF   T  
Sbjct: 18  RLALLEALNDWLEQRCRELWQQIPH-GLRPGTIEDMRAEEARFLMPMPRLFDGFVEYTKR 76

Query: 100 VSKTCLVRFDNNKYSVAASAVGRPVEVQAYADRIVIRQDG 139
           VS TCLV  + N+YS  AS   RPV ++ Y +RIV  + G
Sbjct: 77  VSPTCLVHLERNRYSEPASFANRPVSLRVYPERIVGCRGG 116


>MA1057 [L] COG4584 Transposase and inactivated derivatives Mac
           Methanosarcina acetivorans str.C2A
          Length = 414

 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 19/146 (13%)

Query: 9   PVACTPASGWEKGQVENQVGLVRERFFTPRLRFKNLDELNAWLLDKCITYAKAHRHPELV 68
           P  C P     KG++EN VG V+  FF  R RF +L++LNA          + HR  E V
Sbjct: 219 PRLCRPYRPQTKGKIENTVGYVKRDFFLGR-RFTSLEDLNA----------QVHRWLERV 267

Query: 69  DQTI-WDVFEV-----ERPRLVPYAGR--FDGFHAVTASVSKTCLVRFDNNKYSVAASAV 120
           + T+    +++     +  +L+P      +   H  T  VS+ C + F  NKYSV     
Sbjct: 268 NSTVHGTTYQIPLERFKEEKLIPLDQVPPYKVVHKETRKVSRDCYISFLGNKYSVPYRFA 327

Query: 121 GRPVEVQAYADRIVIRQDGRIVAEHQ 146
           GR  E+Q +     +  D   V EH+
Sbjct: 328 GRTAELQIFEGIFEVYVDYEKVCEHE 353


>MA3326 [L] COG4584 Transposase and inactivated derivatives Mac
           Methanosarcina acetivorans str.C2A
          Length = 414

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 19/146 (13%)

Query: 9   PVACTPASGWEKGQVENQVGLVRERFFTPRLRFKNLDELNAWLLDKCITYAKAHRHPELV 68
           P  C P     KG++EN VG V+  FF  R RF +L++LNA          + HR  E V
Sbjct: 219 PRLCRPYRPQTKGKIENTVGYVKRDFFLGR-RFTSLEDLNA----------QVHRWLERV 267

Query: 69  DQTI-WDVFEV-----ERPRLVPYAGR--FDGFHAVTASVSKTCLVRFDNNKYSVAASAV 120
           + T+    +++     +  +L+P      +   H  T  VS+ C + F  NKYSV     
Sbjct: 268 NSTVHGTTYQIPLERFKEEKLIPLDQVPPYKVVHKETRKVSRDCYISFLGNKYSVPYRFA 327

Query: 121 GRPVEVQAYADRIVIRQDGRIVAEHQ 146
           GR  E+Q +     +  D   V EH+
Sbjct: 328 GRTAELQIFEGIFEVYVDYEKVCEHE 353


>MA2738 [L] COG4584 Transposase and inactivated derivatives Mac
           Methanosarcina acetivorans str.C2A
          Length = 414

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 19/146 (13%)

Query: 9   PVACTPASGWEKGQVENQVGLVRERFFTPRLRFKNLDELNAWLLDKCITYAKAHRHPELV 68
           P  C P     KG++EN VG V+  FF  R RF +L++LNA          + HR  E V
Sbjct: 219 PRLCRPYRPQTKGKIENTVGYVKRDFFLGR-RFTSLEDLNA----------QVHRWLERV 267

Query: 69  DQTI-WDVFEV-----ERPRLVPYAGR--FDGFHAVTASVSKTCLVRFDNNKYSVAASAV 120
           + T+    +++     +  +L+P      +   H  T  VS+ C + F  NKYSV     
Sbjct: 268 NSTVHGTTYQIPLERFKEEKLIPLDQVPPYKVVHKETRKVSRDCYISFLGNKYSVPYRFA 327

Query: 121 GRPVEVQAYADRIVIRQDGRIVAEHQ 146
           GR  E+Q +     +  D   V EH+
Sbjct: 328 GRTAELQIFEGIFEVYVDYEKVCEHE 353