BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0214.0011.p         (138 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2140 [G] COG3839 ABC-type sugar transport systems, ATPase com...   183   8e-47
CAC3237 [G] COG3839 ABC-type sugar transport systems, ATPase com...   175   2e-44
RSc1267 [G] COG3839 ABC-type sugar transport systems, ATPase com...   175   3e-44
BH1140 [G] COG3839 ABC-type sugar transport systems, ATPase comp...   174   7e-44
SMb20419 [G] COG3839 ABC-type sugar transport systems, ATPase co...   172   2e-43

>RSc2140 [G] COG3839 ABC-type sugar transport systems, ATPase components Rso
           Ralstonia solanacearum
          Length = 369

 Score =  183 bits (465), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 108/134 (80%)

Query: 1   MASISIRNLVKRYGNFTVIPDLNLEIADHEFVVFVGPSGCGKSTLLRIIAGLEPITSGDL 60
           MAS+ +RN+ KRY N  V+ ++NLEIAD EFVVFVGPSGCGKSTL+R+IAGLE I+SGDL
Sbjct: 1   MASVLLRNIAKRYDNNEVLHNVNLEIADGEFVVFVGPSGCGKSTLMRMIAGLEDISSGDL 60

Query: 61  YIGDKRVNGVQAAQRDIAMVFQNYALYPHMRVYDNMSFALELRGTPKAEIDARVKRAAAL 120
            I   +VN V +A+R IAMVFQ+YALYPHM +YDNM+F L+L G  KAEID  VK AA +
Sbjct: 61  LIDGAKVNDVPSAKRGIAMVFQSYALYPHMTLYDNMAFGLKLAGAKKAEIDQAVKGAAKI 120

Query: 121 LHIEPYLDRKPKEL 134
           LHI+  LDRKPK+L
Sbjct: 121 LHIDHLLDRKPKQL 134


>CAC3237 [G] COG3839 ABC-type sugar transport systems, ATPase components Cac
           Clostridium acetobutylicum
          Length = 369

 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 85/135 (62%), Positives = 103/135 (76%), Gaps = 1/135 (0%)

Query: 1   MASISIRNLVKRY-GNFTVIPDLNLEIADHEFVVFVGPSGCGKSTLLRIIAGLEPITSGD 59
           MA +S++++ K Y GN T + D NL++AD EF+VFVGPSGCGKST LR+IAGLE IT G+
Sbjct: 1   MADLSLKHIYKVYDGNVTAVKDFNLDVADKEFIVFVGPSGCGKSTTLRMIAGLEEITKGE 60

Query: 60  LYIGDKRVNGVQAAQRDIAMVFQNYALYPHMRVYDNMSFALELRGTPKAEIDARVKRAAA 119
           L IG + VN V    RDIAMVFQNYALYPHM VY+NM+F L+LR TPK  ID +VK+AA 
Sbjct: 61  LTIGGRVVNDVSPKDRDIAMVFQNYALYPHMTVYENMAFGLKLRKTPKDVIDEKVKKAAE 120

Query: 120 LLHIEPYLDRKPKEL 134
           +L I   LDRKPK L
Sbjct: 121 ILDIAHLLDRKPKAL 135


>RSc1267 [G] COG3839 ABC-type sugar transport systems, ATPase components Rso
           Ralstonia solanacearum
          Length = 365

 Score =  175 bits (443), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 78/134 (58%), Positives = 108/134 (80%)

Query: 1   MASISIRNLVKRYGNFTVIPDLNLEIADHEFVVFVGPSGCGKSTLLRIIAGLEPITSGDL 60
           MA +S+RN+ K Y    V+  +++EI D EF+V VGPSGCGKSTLLR++AGLE IT G++
Sbjct: 1   MAKLSLRNVQKHYAGLQVVHGIDMEIGDGEFIVIVGPSGCGKSTLLRMVAGLEAITGGEV 60

Query: 61  YIGDKRVNGVQAAQRDIAMVFQNYALYPHMRVYDNMSFALELRGTPKAEIDARVKRAAAL 120
           +IGD+ VN ++ A+RDIAMVFQNYALYPHM V+DNM++ L++RG PK+EI ARV++AA +
Sbjct: 61  WIGDRVVNELEPAERDIAMVFQNYALYPHMTVFDNMAYGLKIRGLPKSEILARVQQAAGI 120

Query: 121 LHIEPYLDRKPKEL 134
           L +   L+RKP++L
Sbjct: 121 LELGKLLERKPRQL 134


>BH1140 [G] COG3839 ABC-type sugar transport systems, ATPase components Bha
           Bacillus halodurans
          Length = 365

 Score =  174 bits (440), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 85/135 (62%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MASISIRNLVKRY-GNFTVIPDLNLEIADHEFVVFVGPSGCGKSTLLRIIAGLEPITSGD 59
           MA I ++N+ K Y G+   + D NL+I D EF+VFVGPSGCGKST LR+IAGLE I+ GD
Sbjct: 1   MAEIQLKNVYKIYDGDVQAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGD 60

Query: 60  LYIGDKRVNGVQAAQRDIAMVFQNYALYPHMRVYDNMSFALELRGTPKAEIDARVKRAAA 119
           L IG KR+N V    RDIAMVFQNYALYPHM VYDNM+F L+LR   K EID RVK AA 
Sbjct: 61  LLIGGKRMNDVAPKDRDIAMVFQNYALYPHMNVYDNMAFGLKLRKFKKDEIDKRVKNAAK 120

Query: 120 LLHIEPYLDRKPKEL 134
           +L +E  LDRKPK +
Sbjct: 121 ILGLEEMLDRKPKAM 135


>SMb20419 [G] COG3839 ABC-type sugar transport systems, ATPase components Sme
           Sinorhizobium meliloti
          Length = 349

 Score =  172 bits (436), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 108/135 (80%), Gaps = 1/135 (0%)

Query: 1   MASISIRNLVKRY-GNFTVIPDLNLEIADHEFVVFVGPSGCGKSTLLRIIAGLEPITSGD 59
           MA+I+++++ K Y G+   I  ++L IAD EF+V VGPSGCGKSTLLR+IAGLE ITSG+
Sbjct: 1   MATITLKDVHKTYHGDIAAIRGVSLAIADGEFIVLVGPSGCGKSTLLRMIAGLESITSGE 60

Query: 60  LYIGDKRVNGVQAAQRDIAMVFQNYALYPHMRVYDNMSFALELRGTPKAEIDARVKRAAA 119
           + IGD+ VNG++ ++RDIAMVFQNYALYPHM V  N+S+ L+ R TPK EI+ R+ +AA 
Sbjct: 61  ISIGDRVVNGLEPSERDIAMVFQNYALYPHMTVRQNLSYGLKNRNTPKEEIERRIAKAAK 120

Query: 120 LLHIEPYLDRKPKEL 134
            L IEP+LDRKP++L
Sbjct: 121 SLEIEPFLDRKPRQL 135