BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0214.0009.p (275 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc4555 [G] COG0395 ABC-type sugar transport system, permease co... 178 1e-44 YPO1895 [G] COG0395 ABC-type sugar transport system, permease co... 159 5e-39 mlr7265 [G] COG0395 ABC-type sugar transport system, permease co... 154 2e-37 SMc01626 [G] COG0395 ABC-type sugar transport system, permease c... 154 3e-37 PA2340 [G] COG0395 ABC-type sugar transport system, permease com... 152 6e-37 >AGc4555 [G] COG0395 ABC-type sugar transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 286 Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 163/269 (60%), Gaps = 9/269 (3%) Query: 14 LNTVQLVLAGVLIMAPTV----WMVLSSFKPSFEVTAYPPTLIFTPTL---DNYVELTKT 66 L+ + L +++++P + WM+ S K + AYPP LI P NYV++ + Sbjct: 19 LDRIGLFFVALVMISPVILFFIWMISLSLKYEIDNGAYPPILI--PERFAWSNYVKVFEE 76 Query: 67 TPFLSYALNSLIVTVGSTALGLLFGIPAAFAVSWTRISWPAILTLAARMAPGTLFLLPWY 126 F Y NS++VT +T L L+ G+PA + ++ + A++ + ARM PG FL+P + Sbjct: 77 NSFFLYFWNSVLVTGAATILALVIGVPAGYGIARLKAEKSAVVIMIARMTPGLSFLIPLF 136 Query: 127 VMFRQIGMIGSYTALILSHAVITLPIVIWVLLPSFDGIPRSVFEAAQVDGCSVTRILWRI 186 ++F+ + ++G+ I+ H V+T+PIV+W+++ F+ P+ + EAA +DG S ++ + Sbjct: 137 LLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGASSWQVFRLV 196 Query: 187 ALPLVASGVAVSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQWGALMAAA 246 ALP+ G+ VS ILA +FSWN F+F +VL++ +T+TL A +N + WG L AAA Sbjct: 197 ALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSWGPLAAAA 256 Query: 247 TLIALPPLVLAALVQRWLVSGLTLGAVKG 275 ++ LP L+L Q+ +V+GLT GAVKG Sbjct: 257 LIVTLPVLLLTMFAQKQIVAGLTAGAVKG 285 >YPO1895 [G] COG0395 ABC-type sugar transport system, permease component Ype Yersinia pestis Length = 275 Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 99/258 (38%), Positives = 142/258 (55%), Gaps = 2/258 (0%) Query: 19 LVLAGVLIMAPTVWMVLSSFKPSFEVTAYPPTLIFTPTLDNYVELTKTTPFLSYALNSLI 78 LV+ V + P W+V SFK + A PP L FTP LDNY ++ F+ NSL+ Sbjct: 18 LVVILVFFLLPIYWLVTMSFKTYIDAFAMPPKLWFTPILDNYRQVLGNGDFIRAFGNSLL 77 Query: 79 VTVGSTALGLLFGIPAAFAVSW--TRISWPAILTLAARMAPGTLFLLPWYVMFRQIGMIG 136 +++ ST L L+ G A+ + + R ++ R AP + ++P Y + ++GM Sbjct: 78 ISLVSTFLCLILGALFAYGLVFFIERKGRAKQFIMSLRYAPVIMLVIPVYYLITKLGMTD 137 Query: 137 SYTALILSHAVITLPIVIWVLLPSFDGIPRSVFEAAQVDGCSVTRILWRIALPLVASGVA 196 +Y LIL + V +P I ++ F+ IP + EAA+VDG S R+ + LPL +G+A Sbjct: 138 NYLVLILVYTVANVPFTILMVTTFFEDIPPEIREAARVDGASEWRVFLSVMLPLARTGLA 197 Query: 197 VSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQWGALMAAATLIALPPLVL 256 S +L F WN F L LS T+TL A +F+ T+WG L AA TL+ LP LVL Sbjct: 198 ASGVLTLFFIWNEFQIVLTLSGDSTQTLPVAITSFLTFQGTEWGPLTAAGTLVMLPMLVL 257 Query: 257 AALVQRWLVSGLTLGAVK 274 LVQ+ LV GLT+G VK Sbjct: 258 GLLVQKHLVRGLTMGGVK 275 >mlr7265 [G] COG0395 ABC-type sugar transport system, permease component Mlo Mesorhizobium loti Length = 285 Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/277 (37%), Positives = 152/277 (54%), Gaps = 13/277 (4%) Query: 12 RWLNTVQLVLAGVLIMAPTVWMVLSSFKPSFEVTAYPPTLIFTPTLDNYVEL-------- 63 R L V L L + M P VW+ + SF+ + + PP LIF PTL NY L Sbjct: 9 RILRGVALTLVVIFFMFPIVWIFMMSFQTNETILRIPPQLIFEPTLANYTALITGKLMTA 68 Query: 64 --TKTTPFLSYALNSLIVTVGSTALGLLFGIPAAFAVSWTRISWP---AILTLAARMAPG 118 T F+ NS+ ++V S A+ LL G+PAA+A + + A L+ + AP Sbjct: 69 AGTLDIAFMRNLWNSVFLSVTSVAVSLLLGVPAAYAFARHKFRGSEDIAFTLLSFKFAPA 128 Query: 119 TLFLLPWYVMFRQIGMIGSYTALILSHAVITLPIVIWVLLPSFDGIPRSVFEAAQVDGCS 178 L LLP + F+++G+ +Y LI + +I LP+++W++ F+ IP + A ++ G S Sbjct: 129 LLVLLPLTLYFQKLGLANTYVGLIWVYQLICLPLILWIVRGYFEDIPADIEYAYRIGGHS 188 Query: 179 VTRILWRIALPLVASGVAVSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQ 238 +IALPL G+A + +LAF+F+WN F+FALVL++ D + + A FI Q Sbjct: 189 WFATFRKIALPLAGPGIAAAGLLAFIFAWNNFVFALVLASADKQPVTVGALAFITSSGIQ 248 Query: 239 WGALMAAATLIALPPLVLAALVQRWLVSGLTLGAVKG 275 +G + AA L P L LA QR+LV GL+LGAVKG Sbjct: 249 YGQISAAIVLSITPTLALALYAQRYLVEGLSLGAVKG 285 >SMc01626 [G] COG0395 ABC-type sugar transport system, permease component Sme Sinorhizobium meliloti Length = 285 Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 104/277 (37%), Positives = 153/277 (55%), Gaps = 13/277 (4%) Query: 12 RWLNTVQLVLAGVLIMAPTVWMVLSSFKPSFEVTAYPPTLIFTPTLDNYVEL-------- 63 R L V L L V M P VW+ L SF+ + + PP+++FTPTL+NY L Sbjct: 9 RLLRGVALTLVVVFFMFPIVWIFLMSFQTNETILRIPPSVVFTPTLENYAALITGKLQTA 68 Query: 64 --TKTTPFLSYALNSLIVTVGSTALGLLFGIPAAFAVSWTRISWP---AILTLAARMAPG 118 T F+ NS++++V S AL L+ G+PAA+A + + A L+ R AP Sbjct: 69 SGTLDIAFMRNLGNSVLLSVASVALALVLGVPAAYAFARHKFRGSEDIAFTLLSFRFAPP 128 Query: 119 TLFLLPWYVMFRQIGMIGSYTALILSHAVITLPIVIWVLLPSFDGIPRSVFEAAQVDGCS 178 L LLP F+ +G+ +Y LI + +I LP+++W++ F+ I V A ++ G S Sbjct: 129 LLVLLPLTQYFQWLGLSNTYFGLIWIYQLICLPLILWIVRGYFEDISADVEYAYRIAGHS 188 Query: 179 VTRILWRIALPLVASGVAVSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQ 238 +IALPL G+A + +LAF+F+WN F+FALVL++ D + + A F+ Q Sbjct: 189 WFSTFRKIALPLAGPGIAAAGLLAFIFAWNNFVFALVLASADKQPVTVGALAFVTASGIQ 248 Query: 239 WGALMAAATLIALPPLVLAALVQRWLVSGLTLGAVKG 275 +G + AA L P L LA QR+LV GL+LGAVKG Sbjct: 249 YGQIAAAIVLSITPTLALALYAQRYLVEGLSLGAVKG 285 >PA2340 [G] COG0395 ABC-type sugar transport system, permease component Pae Pseudomonas aeruginosa Length = 277 Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 87/255 (34%), Positives = 148/255 (58%), Gaps = 3/255 (1%) Query: 23 GVLIMAPTVWMVLSSFKPSFEVTAYPPTLIFTPTLDNYVELTKTTPFLSYALNSLIVTVG 82 +L+ P WM+L+SFK + A PP IF PTL+NY+ + + + + +YA NSL+++ Sbjct: 23 ALLLFFPIFWMLLTSFKSEIDAFATPPQFIFQPTLENYLHINERSDYFAYAWNSLLISSS 82 Query: 83 STALGLLFGIPAAFAVSW--TRISWPAIL-TLAARMAPGTLFLLPWYVMFRQIGMIGSYT 139 +T L +L +PAA+++++ TR + +L L+ +M P L+P Y++ +Q G++ S Sbjct: 83 ATLLCMLVAVPAAYSMAFFETRHTKRTLLWMLSTKMLPPVGVLMPIYLLAKQFGLLDSRL 142 Query: 140 ALILSHAVITLPIVIWVLLPSFDGIPRSVFEAAQVDGCSVTRILWRIALPLVASGVAVSA 199 ALI+ + +I LPIV+W++ F IP + EAA++DG + + R+ LP+ G+A + Sbjct: 143 ALIIVYTLINLPIVVWMVYTYFKDIPVDILEAARLDGAGTWQEIVRVLLPIARGGLASTL 202 Query: 200 ILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQWGALMAAATLIALPPLVLAAL 259 +L+ + WN ++L L++ L A ++ W L A +TL P LV + Sbjct: 203 LLSLILCWNEAFWSLNLTSSAAAPLTALVASYSSPEGLFWAKLSAVSTLACAPILVFGWI 262 Query: 260 VQRWLVSGLTLGAVK 274 Q+ LV GL+ GAVK Sbjct: 263 SQKQLVRGLSFGAVK 277