BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0213.0011.p (742 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr7771 Non COG 180 1e-44 YPO1673 [S] COG5373 Predicted membrane protein Ype Yersinia pestis 130 1e-29 AGc1927 [S] COG5373 Predicted membrane protein Atu Agrobacterium... 105 3e-22 mlr7772 Non COG 94 9e-19 SMc02633 [S] COG5373 Predicted membrane protein Sme Sinorhizobiu... 80 2e-14 >mlr7771 Non COG Length = 810 Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 188/554 (33%), Positives = 280/554 (50%), Gaps = 27/554 (4%) Query: 7 APGEWSRRQEGISNIAALPIANIPAILTAAGTAVAFATVYAAYALYDFLAPATAFILLGM 66 A GE+ RR + + A IPAILTAAG + F TVYAA+ +Y F+ PA AF LLG Sbjct: 179 AGGEFIRRTGFKVPVQGVAGAYIPAILTAAGAFILFGTVYAAHGIYGFIGPALAFTLLGA 238 Query: 67 VALGTLAAALLHGPALAGLGIVGAFVTPLLVSSDKPDFWSLYIYLAIVTAAAFALARIRL 126 + + T+AAAL+HG ALAG+G+VGA VTP+LV+S P+ W+L+ YLAIV A +AR+R Sbjct: 239 IGVATIAAALVHGLALAGIGLVGAMVTPVLVASQAPNPWALFGYLAIVLATTAVIARMRD 298 Query: 127 WRWLAVTTIAFALLWTFPCLACGPEMIVPHVFHVIAGFVLAALLVVCGFMFGPDGDGEEI 186 W+ L +WT + P + +P + F+ A L V F++ E Sbjct: 299 WKALMAAAFFGTGIWTILYMTDAPGVNLPAIL-----FIDAVTLAVLAFVWLGGHRDETA 353 Query: 187 EPISSSSLAAYLLGAMLIVLNSAHADTAMIGFAL----LTAGSLFVAWRAPAAAA---AI 239 S+ L A + S A G+AL + A + VA P A A Sbjct: 354 RTFDWPSIVPGLFVAFSALGLSVDPTFAAAGYALPGAAILAAMVAVALYRPLALPLLYAA 413 Query: 240 GAASIFVFI-VFGEWAVRRNVDMLVLPGGAIPGIGPSATDGSVSLHLVTAALFAAAFGIA 298 G A++ +++ + ++ + L + G+ P AT +++L + A F A Sbjct: 414 GLATVMIYLGIIPPTSIASDFSAGAL---GVDGL-PVATSNALTLRIGIA--LGLVFIGA 467 Query: 299 GFLAQFRFATTKV--TVTWAAAAVFTPVALLVALYARIAHLDRSIPFAILAVLLAAAYAA 356 G A +FA + + +WAA+ P+ +L+AL+ +LDR +A +A L+ +A Sbjct: 468 GLWAARKFAASSPLRSASWAASGAVVPLVILLALWFTFGNLDRDFVYAAVAALMVVVFAG 527 Query: 357 ATEALTRRGERPELSPSIALS---ATGALASLALALTFALDKGWLTIALALVSMGTAWLS 413 E + R E P L IA+S ALA L L L A GW TI L ++ A + Sbjct: 528 GGEWIA-RAEEPSLKGGIAVSFALVGAALAGL-LMLHMAFSSGWTTILLGAAAIVPALAT 585 Query: 414 VRRPIPFLRWLAAILAGIVMLRIGYEPRIAG-DAVGTTPIFNWLLWGYGVPALSFWAASH 472 R P L W++ V+ R+ ++P I G + + TTP+FNWLL GYGVPAL+F A+ Sbjct: 586 RWRSYPVLGWISVGAVIAVLGRVAFDPTIVGAEFLSTTPVFNWLLPGYGVPALAFGFAAW 645 Query: 473 FLRRSGDDVPLRIVEAAAILFTVLLAFMEIRHAVNSGDVYYASAGLTEVALQIGVTLAMA 532 L R+ + P +EAAA LF +L M +RHA++ G + L E A+ + + Sbjct: 646 QLARTTNGRPRLAMEAAAALFALLAVAMLVRHAMHGGVIDTGPMTLAEQAIYTLIAIGAG 705 Query: 533 IGLERLRLRSGSIV 546 L + +RS S V Sbjct: 706 AILVAIDMRSPSSV 719 >YPO1673 [S] COG5373 Predicted membrane protein Ype Yersinia pestis Length = 958 Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 133/444 (29%), Positives = 217/444 (48%), Gaps = 46/444 (10%) Query: 315 WAAAAVFTPVALLVALY--ARIAHLDRSIPFAILAVLLAA--AYAAATEALTRRGERPEL 370 WA +V P+ L+ + Y R + + +LAV LA A+ A ++ RRG Sbjct: 517 WALLSVLVPMYLVASTYYACRDNFELAPVKYTLLAVCLAMYIAWNAFSDGY-RRGS---- 571 Query: 371 SPSIALSATGALASLALALTFALDKGWLTIALALVSMGTA-----WLSVRRPIPFLRWLA 425 AL T + L LTFAL + + L L+ G W R+ + L W+ Sbjct: 572 ----ALLRTIYQVAAQLTLTFALFMAFSQVTLTLLLAGQLLVLVLWQRWRQ-VSLLSWIL 626 Query: 426 AILAGIVMLRIGYEPRIAGDA----VGTTPIFNWLLWGYGVPALSFWAASHFLRRSGDDV 481 + A I+++R+ P I G + +G+ + W L+G+G+P L W +S +L + Sbjct: 627 KLHAIILLVRLSMNPYILGYSSPLHIGSV-VIPWTLYGFGIPILCLWLSSRWLPARRGEQ 685 Query: 482 PLRIVEAAAILFTVLLAFMEIRHAVNSGDVYYAS---AGLTEVALQIGVT---LAMAIGL 535 + A AI L +E+RH ++ Y+ S A LT+ AL GVT +A+A G Sbjct: 686 TANWLAANAIYLLALWINVELRHLLHGS--YHLSLDFASLTDCALH-GVTFGLMALAYGY 742 Query: 536 ERLRLRSGSIVHNVGAILLTAFAGLASLFGLLALENPMLWWQDVGG-SFINLLLLGYALP 594 S ++ + A +A L L + NP+ Q VGG +N++ + YA+P Sbjct: 743 REQFADSLQRIYRLAAKT-SAILMLTLTLLCLVVFNPIWSAQQVGGLPLLNMVTVAYAIP 801 Query: 595 AVLALLLSYAVARHRPAGYAN------TIAAGALVLALAYVTFEIRRLYHGPVLTRGETT 648 V ++ R+ P + + I A AL L + ++T +R+L+HG L Sbjct: 802 MVFMVV----ALRYWPDHWLDIRLKPYVIGAIAL-LGMVFITLTVRQLWHGDRLDNDIVY 856 Query: 649 GAEQYTYSIAWLMFGVALLGIGVMVNSQRARLASAAVIGLTILKAFLIDMSTLTGVYRAL 708 EQY+YS+AW++ + ++ + + + R AS ++ LTI+K FL DMS L G+YR++ Sbjct: 857 SGEQYSYSLAWMLTAIGMMYSAIHWPNYKVRRASLGLLALTIVKLFLWDMSGLEGLYRSV 916 Query: 709 SFMCLGIVLVAIGWLYQRILFRRR 732 SF+ LG+ LVAIGW YQ+ + + Sbjct: 917 SFLGLGLCLVAIGWFYQKFVVMKE 940 >AGc1927 [S] COG5373 Predicted membrane protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 923 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/119 (48%), Positives = 78/119 (65%) Query: 9 GEWSRRQEGISNIAALPIANIPAILTAAGTAVAFATVYAAYALYDFLAPATAFILLGMVA 68 GE RR+ A A IP +LTAAG F VYAAY +YD++ TAFILLG+VA Sbjct: 177 GEAIRRKAVPGIATAYSNAMIPGVLTAAGALTLFGVVYAAYGIYDYIGSGTAFILLGLVA 236 Query: 69 LGTLAAALLHGPALAGLGIVGAFVTPLLVSSDKPDFWSLYIYLAIVTAAAFALARIRLW 127 T+ +LLHG ALAGLG++G+ +TP L+SS+KP+ W+L+++L I A A AR + W Sbjct: 237 FATIGLSLLHGQALAGLGLLGSMLTPALISSEKPNIWALFVFLTISWLATAAAARRQGW 295 >mlr7772 Non COG Length = 192 Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 79/167 (47%), Positives = 99/167 (59%), Gaps = 5/167 (2%) Query: 564 FGLLALENPMLWWQDVGG-SFINLLLLGYALPAVLALLLSYAVARHRPAGYANTIAAGAL 622 FG+L NP+ + G NLL L Y LPAV A L+ V RP Y+ +A A Sbjct: 16 FGVL---NPLFTDESTGRIPVFNLLFLAYLLPAVAAGGLALYVRGKRPKWYSAMLALVAA 72 Query: 623 VLALAYVTFEIRRLYHGPVLTRGETTGA-EQYTYSIAWLMFGVALLGIGVMVNSQRARLA 681 +LA AY T +RRL+ G + G E YTYS WL+ GVALL GV + SQ R+A Sbjct: 73 LLAFAYATLSVRRLFKGEFIGLWSRLGQLETYTYSALWLVIGVALLTAGVWLKSQVLRIA 132 Query: 682 SAAVIGLTILKAFLIDMSTLTGVYRALSFMCLGIVLVAIGWLYQRIL 728 SAA+I + +LK FL DMS L GV RA+SF+ LG VL+ IG YQR+L Sbjct: 133 SAALIAIAVLKVFLFDMSELEGVLRAMSFIGLGAVLIGIGLFYQRLL 179 >SMc02633 [S] COG5373 Predicted membrane protein Sme Sinorhizobium meliloti Length = 928 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 2/130 (1%) Query: 9 GEWSRRQEGISNIAALPIANIPAILTAAGTAVAFATVYAAYALYDFLAPATAFILLGMVA 68 GE RR++ + A IP +LTAAG F VYAAY +YDF+ AF+LL +V+ Sbjct: 172 GEVIRRRDVPAIADRFRNAMIPGVLTAAGAVTLFGVVYAAYGIYDFIGTGAAFVLLALVS 231 Query: 69 LGTLAAALLHGPALAGLGIVGAFVTPLLVSSDKPDFWSLYIYLAIVTAAAFALARIRLWR 128 L T+ +LLHG ALAGLG++ + +TPL VSS +P W L+ +LA+ A A +R+R R Sbjct: 232 LATVGLSLLHGQALAGLGLLASLLTPLFVSSGEPRPWVLFGFLAVAWLATLAASRLR--R 289 Query: 129 WLAVTTIAFA 138 W V T+A A Sbjct: 290 WSVVPTLANA 299