BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0212.0007.p (268 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1858 [V] COG3570 Streptomycin 6-kinase Pae Pseudomonas aeruginosa 288 1e-77 SMc01228 [V] COG3570 Streptomycin 6-kinase Sme Sinorhizobium mel... 263 4e-70 DR0455 [V] COG3570 Streptomycin 6-kinase Dra Deinococcus radiodu... 202 4e-52 mll8451 Non COG 110 2e-24 AGc2291 [V] COG3570 Streptomycin 6-kinase Atu Agrobacterium tume... 94 2e-19 >PA1858 [V] COG3570 Streptomycin 6-kinase Pae Pseudomonas aeruginosa Length = 275 Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 154/270 (57%), Positives = 180/270 (66%), Gaps = 10/270 (3%) Query: 2 FAPYLSAWSLVADGDPIVTHAARLLPVRRHGEPAMLKLSHEPDERLGAVVMEWWDGEGAA 61 F+PYL W+L DG+P TH++RLLPVR G AMLK+S +ER G V++ WWDG+GAA Sbjct: 7 FSPYLERWALQPDGEPFATHSSRLLPVRHRGAAAMLKISSAEEERFGHVLLNWWDGQGAA 66 Query: 62 RVLALDGDALLLERAMGSASLGDMARTGRDDEACRILCATADRLHADRAKPRPDLTPLAH 121 RVLA D ALL+ERA G SL +M R G DDEA RILC +R+HA R P P+LTPL Sbjct: 67 RVLAYDHQALLMERATGGRSLLEMVRRGDDDEATRILCQAIERIHAPRPGPLPELTPLER 126 Query: 122 WF----RAARAHGGVLNRSAEVAEALLGNQREIVVLHGDLHHDNVLDFGARGWLAIDPKH 177 WF A R +GG+ A A LL RE LHGD+HH NVLDFG RGW IDPK Sbjct: 127 WFDSLYAAERRYGGLYVDCANAARYLLETAREQRPLHGDIHHGNVLDFGERGWQVIDPKR 186 Query: 178 LVGERGFDFANIFTNPDLADPTRPVATEPGRFARRLDIVIEAARLDRRRLLSWIVAWTGL 237 L GERG+D+AN+FTNPD A PGRF R+L+IVI A+ L RRRLL WI+AWTGL Sbjct: 187 LYGERGYDYANLFTNPDAK-----TAQAPGRFERQLEIVIAASGLQRRRLLQWILAWTGL 241 Query: 238 SAAWFLGDGD-PLAEIDLTIARLAAAELDR 266 SAAWF DG E +L IARLA A L R Sbjct: 242 SAAWFDEDGSREETEAELAIARLALANLAR 271 >SMc01228 [V] COG3570 Streptomycin 6-kinase Sme Sinorhizobium meliloti Length = 264 Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 144/268 (53%), Positives = 175/268 (65%), Gaps = 10/268 (3%) Query: 1 MFAPYLSAWSLVADGDPIVTHAARLLPVRRHGEPAMLKLSHEPDERLGAVVMEWWDGEGA 60 MF ++ WSL GDPI+T +RLLPVR G PAMLK++ EP+ER G +M WWDG GA Sbjct: 1 MFTSFIDEWSLEPAGDPILTRTSRLLPVRWRGLPAMLKVADEPEERSGGQLMRWWDGHGA 60 Query: 61 ARVLALDGDALLLERAMGSASLGDMARTGRDDEACRILCATADRLHADRAKPRPDLTPLA 120 A+V A A+LLER+ SL MA TG DD+A RI C LHA R P L PL Sbjct: 61 AQVYAATDSAILLERSESRRSLFHMAMTGSDDDATRIACRAVAMLHAPRPSPPAGLAPLE 120 Query: 121 HWFR----AARAHGGVLNRSAEVAEALLGNQREIVVLHGDLHHDNVLDFGARGWLAIDPK 176 WF+ AAR HGG+L A+ A+ LL VVLHGD+HH N+LDF ARGWLAIDPK Sbjct: 121 RWFQALAPAARLHGGILRTCADAAQHLLSTPDVPVVLHGDIHHGNILDFDARGWLAIDPK 180 Query: 177 HLVGERGFDFANIFTNPDLADPTRPVATEPGRFARRLDIVIEAARLDRRRLLSWIVAWTG 236 L G+RGFD+AN+F N +L PV + PGR R+L IV ARL+ +RLL WI+A+ G Sbjct: 181 GLCGDRGFDYANLFCNLEL-----PVVSAPGRLTRQLAIVAHEARLEPKRLLQWIIAYAG 235 Query: 237 LSAAWFLGDGDPLAEIDLTIARLAAAEL 264 LSAAWFLGDG+ E L +A +A AEL Sbjct: 236 LSAAWFLGDGES-PESTLAVAAIADAEL 262 >DR0455 [V] COG3570 Streptomycin 6-kinase Dra Deinococcus radiodurans Length = 283 Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 135/259 (52%), Positives = 162/259 (62%), Gaps = 19/259 (7%) Query: 2 FAPYLSAWSLVADGDPIVTHAARLLPVRRHGE----PAMLKLSHEPDERLGAVVMEWWDG 57 F P+L+ W L DG+P+ TH + LLPV HG+ AMLKL+ +ER GA +M++W G Sbjct: 11 FTPWLTRWHLTPDGEPLRTHGSDLLPVLWHGQGEGQAAMLKLARSEEERRGAGLMQFWQG 70 Query: 58 EGAARVLAL--DGDALLLERAMGSASLGDMARTGRDDEACRILCATADRLHADRAKPRPD 115 +GAARVLA+ DG ALLLER G SL + G DDEA R+LCA A RLH R P P Sbjct: 71 DGAARVLAVSEDGAALLLERVSGCRSLTALVHAGHDDEATRLLCAAAARLHRPRPGPLPP 130 Query: 116 LTPLAHWFR---AARAHGGVLNRSAEVAEALLGNQREIVVLHGDLHHDNVLD-----FGA 167 L PLA WFR A L+ A VA LL + +E+ LHGDLHH NVLD G Sbjct: 131 LLPLADWFRGLFAGEKQDTRLHFPAAVARQLLASPQEVGPLHGDLHHANVLDGGDPGQGG 190 Query: 168 RGWLAIDPKHLVGERGFDFANIFTNPDLADPTRPVATEPGRFARRLDIVIEAARLDRRRL 227 RGWLAIDPK L GERG+D AN+ NPD A A PGR R+L + AARLD RL Sbjct: 191 RGWLAIDPKGLHGERGYDHANLLCNPDPA-----TALRPGRLERQLAVAAHAARLDPARL 245 Query: 228 LSWIVAWTGLSAAWFLGDG 246 W++A+TGLSAAW+L DG Sbjct: 246 ARWVMAYTGLSAAWWLEDG 264 >mll8451 Non COG Length = 279 Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 134/276 (48%), Gaps = 24/276 (8%) Query: 1 MFAPYLSA-WSLVADGDPIVTHAARLLPV-RRHGEPAMLK----LSHEPDERLGAVVMEW 54 M AP L A W + A T ++R+ V R G PA++K DE G + W Sbjct: 1 MDAPALPARWKVSAPELIAETFSSRIWKVVRDDGSPAVVKALKPFDDVADELRGEHFLAW 60 Query: 55 WDGEGAARVLALDGDALLLERAMGSASLGDMARTGRDDEACRILCATADRLHADRAKPRP 114 GEGA R+L DG ++LLE A G L + D+ A I +L + P P Sbjct: 61 RRGEGAVRLLGRDGHSMLLEYA-GETLLTQVLDEQGDNAATAIAAELMTKLFSPSQHPYP 119 Query: 115 -DLTPLAH----WFRAARA-----HGGVLNRSAEVAEALLGNQREIVVLHGDLHHDNVLD 164 +L PL FR A H + +A +AE LL N +I LHGDLHHDN+L Sbjct: 120 PELQPLTERYTSLFRKAATDRGAGHASIYVEAAAIAERLLDNPHDIRPLHGDLHHDNIL- 178 Query: 165 FGARGWLAIDPKHLVGERGFDFANIFTNP-DLADPTRPVATEPGRFARRLDIVIEAARLD 223 G RGWL IDPK ++G GFD AN+F NP D D + +P R A ++ + Sbjct: 179 HGPRGWLVIDPKGVLGNPGFDAANMFYNPLDRDD----LCLDPERIAHMAEVFAKTLGES 234 Query: 224 RRRLLSWIVAWTGLSAAWFLGDGDPLAEI-DLTIAR 258 +L +A+ LSAAW D + + E +L+IA+ Sbjct: 235 PAAILDHAIAYGCLSAAWHHEDDNAVEENRELSIAK 270 >AGc2291 [V] COG3570 Streptomycin 6-kinase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 281 Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 107/212 (50%), Gaps = 18/212 (8%) Query: 48 GAVVMEWWDGEGAARVLALDGDALLLERAMGSASLGD-MARTGRDDEACRILCATADRLH 106 GA + W G G +L + LL+E A G+ +L D + R G DD I R H Sbjct: 55 GADFIAWRAGIGCVELLDQSDNILLMEHA-GTETLRDVLFRDGNDDATTEIAAEVLLRYH 113 Query: 107 --ADRAKPRPDLT-PL--AHWFRAA---RAHG--GVLNRSAEVAEALLGNQREIVVLHGD 156 ++++ P LT PL FR A R+ G +A +A+ L+ QR+I LHGD Sbjct: 114 QPSEQSPPSSLLTLPLYFESLFRKAEQDRSDGVDSPFVEAARLAQTLIDQQRDIKPLHGD 173 Query: 157 LHHDNVLDFGARGWLAIDPKHLVGERGFDFANIFTNP-DLADPTRPVATEPGRFARRLDI 215 LHH+N++ RGW+ IDP L+G+ D AN+F+NP D D TR A R A I Sbjct: 174 LHHENIM-HSDRGWIIIDPAGLIGDAALDVANMFSNPLDRFDLTRSEA----RIASMAAI 228 Query: 216 VIEAARLDRRRLLSWIVAWTGLSAAWFLGDGD 247 A + D R LL + A+ LSA W DG+ Sbjct: 229 FSRALQRDERLLLQYAFAYGCLSATWHEEDGN 260