BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0211.0003.p (245 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO3920 [R] COG4618 ABC-type protease/lipase transport system, A... 223 3e-58 AGl2880 [R] COG4618 ABC-type protease/lipase transport system, A... 223 4e-58 mlr6771 [R] COG4618 ABC-type protease/lipase transport system, A... 218 8e-57 RC0429 Non COG 216 4e-56 PA1246 [R] COG4618 ABC-type protease/lipase transport system, AT... 216 5e-56 >YPO3920 [R] COG4618 ABC-type protease/lipase transport system, ATPase and permease components Ype Yersinia pestis Length = 602 Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 110/250 (44%), Positives = 163/250 (65%), Gaps = 19/250 (7%) Query: 1 VRELLAVNPPRESGLTLPRPEGRLSVEALSFAVPGTSRPILRGVTFKIEPGEVLGIIGPS 60 + +LLA +P +G+ LP P+G+L+V L PGT P+L + F+++PG+VLGI+GPS Sbjct: 313 LSQLLAQHPSSPTGMVLPAPQGKLNVTQLMACKPGTHIPVLHSINFELQPGDVLGILGPS 372 Query: 61 GAGKSTLARHIVGVQAPSAGAVRLDGSDVSSWIRSSLGEHLGYLPQDIELFADTVAANIC 120 G+GKSTLA+ +V Q +G VRLD +D+S W ++ LGE +GYLPQ+I+LF TVA NI Sbjct: 373 GSGKSTLAKLLVASQPTFSGTVRLDSADLSRWDKTQLGEFIGYLPQNIQLFRGTVAENIA 432 Query: 121 RFKDGDDKDIILAARMADVHEMILRLA-------------------XRIGLARAVYGNPS 161 RF D ++ AA++ADVH++IL L RI LARA+YG P Sbjct: 433 RFGAIDTAKVVAAAQLADVHDLILHLPQGYDTPLGDDGEGLSGGQRQRIALARAMYGIPR 492 Query: 162 LVVLDEPSSNLDAEGDAALAECITELKKRGTTVVIISHRPATIGVADKLLVLRDGVVEMF 221 L+VLDEP+++LD EG+ AL I +LK++G T+V+I+H+P + +D LL L++G +++F Sbjct: 493 LIVLDEPNASLDKEGEQALLASIIQLKQQGCTIVMITHKPELLSGSDYLLFLKNGQMDLF 552 Query: 222 GARHEVLSRL 231 VL + Sbjct: 553 DRTQAVLQNI 562 >AGl2880 [R] COG4618 ABC-type protease/lipase transport system, ATPase and permease components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 615 Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 122/262 (46%), Positives = 163/262 (62%), Gaps = 20/262 (7%) Query: 1 VRELLAVNPPRESGLTLPRPEGRLSVEALSFAVPGTSRPILRGVTFKIEPGEVLGIIGPS 60 +REL A P + + LP+PE L VE ++ PG +P + G+ F + G LGIIGPS Sbjct: 313 LRELFAQMPANAAAMALPKPEKELRVENVTIVPPGERKPTVTGLGFVVTAGNALGIIGPS 372 Query: 61 GAGKSTLARHIVGVQAPSAGAVRLDGSDVSSWIRSSLGEHLGYLPQDIELFADTVAANIC 120 G+GKSTLAR + G P+AG VRLDG+ W R +LG H+GYLPQ +ELF T+ NI Sbjct: 373 GSGKSTLARILTGAWMPAAGKVRLDGASFDQWDRETLGRHIGYLPQGVELFDGTIGENIS 432 Query: 121 RFKDGDDKD-IILAARMADVHEMILRLA-------------------XRIGLARAVYGNP 160 RF D D + II AAR A HE+ILR RIGLARA+YG+P Sbjct: 433 RFDDNPDPEAIIAAARAAGAHELILRFEKGYDSDIGEAGSTLSAGQRQRIGLARALYGDP 492 Query: 161 SLVVLDEPSSNLDAEGDAALAECITELKKRGTTVVIISHRPATIGVADKLLVLRDGVVEM 220 +VVLDEP++NLDAEG+AA+ + IT +K RG V+++HRP+ IG D +L++ DG ++ Sbjct: 493 FIVVLDEPNANLDAEGEAAVVKAITSVKARGGIAVVVAHRPSAIGAVDYILMMEDGRMKA 552 Query: 221 FGARHEVLSRLTRPVPVAAVRG 242 FG R EVLS++ R A +G Sbjct: 553 FGPRDEVLSKVLRVPQAQAAKG 574 >mlr6771 [R] COG4618 ABC-type protease/lipase transport system, ATPase and permease components Mlo Mesorhizobium loti Length = 570 Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 119/260 (45%), Positives = 164/260 (63%), Gaps = 20/260 (7%) Query: 5 LAVNPPRESGLTLPRPEGRLSVEALSFAVPGTSRPILRGVTFKIEPGEVLGIIGPSGAGK 64 LAV E + LPRP+ L+VE L+ A PG +P + V+F++ G + I+GPSG+GK Sbjct: 299 LAVVGGHEEVMELPRPQAVLAVEDLTIAPPGQQKPTVANVSFQLSGGAGMAIVGPSGSGK 358 Query: 65 STLARHIVGVQAPSAGAVRLDGSDVSSWIRSSLGEHLGYLPQDIELFADTVAANICRFKD 124 +TL R +VGV P G VRLD + + W LG H+GYLPQD+ELF TVA NI RF Sbjct: 359 TTLVRALVGVWQPLRGMVRLDEASLDQWSPEKLGAHIGYLPQDVELFDGTVADNISRFGG 418 Query: 125 GDD-KDIILAARMADVHEMILRLA-------------------XRIGLARAVYGNPSLVV 164 DD K ++ AA+ A V +MI+RL +GLARA+YG+P LVV Sbjct: 419 KDDAKGVLAAAKAAGVDKMIMRLPNGFQTRVGEGGAALSAGQRQLVGLARALYGDPFLVV 478 Query: 165 LDEPSSNLDAEGDAALAECITELKKRGTTVVIISHRPATIGVADKLLVLRDGVVEMFGAR 224 LDEP+SNLD +GDAALA I +++RG V+I++HRP+ + DK+LV+ +G++ FG+R Sbjct: 479 LDEPNSNLDVDGDAALAGAILAVRRRGGIVIIVAHRPSALTNIDKVLVMSNGMLHSFGSR 538 Query: 225 HEVLSRLTRPVPVAAVRGAT 244 EVL+ + RP P A R A+ Sbjct: 539 EEVLANVIRPFPSPAERPAS 558 >RC0429 Non COG Length = 584 Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 109/255 (42%), Positives = 155/255 (60%), Gaps = 28/255 (10%) Query: 1 VRELLAVNPPRESGLTLPRPEGRLSVEALSFA--------VPGTSRPILRGVTFKIEPGE 52 + L R+ + +P +G L+VE + +A P + IL+GV+F ++PGE Sbjct: 314 INNLFNTYSSRDETMPIPNVDGHLTVENIYYAHPIPQYLPQPPVPKYILKGVSFAVQPGE 373 Query: 53 VLGIIGPSGAGKSTLARHIVGVQAPSAGAVRLDGSDVSSWIRSSLGEHLGYLPQDIELFA 112 VL IIGPS GKSTLA+ IVGV S+G+VRLD +++ W R G H+GYLPQ IELF+ Sbjct: 374 VLAIIGPSATGKSTLAKIIVGVWKESSGSVRLDSAEIYRWNREDFGRHVGYLPQGIELFS 433 Query: 113 DTVAANICRF-KDGDDKDIILAARMADVHEMILRLA-------------------XRIGL 152 ++ NI R +D D + +I AA++A HEMILR RIGL Sbjct: 434 GSIKQNIARMEEDADPQKVIEAAKIAGAHEMILRFPDGYDSDIGPAGSNLSGGQRQRIGL 493 Query: 153 ARAVYGNPSLVVLDEPSSNLDAEGDAALAECITELKKRGTTVVIISHRPATIGVADKLLV 212 ARA YGNP L++LDEP++NLD G+ ALA + + K +G V++ISHRP+ + V DK+L+ Sbjct: 494 ARAFYGNPKLIILDEPNANLDEAGEVALASALKQAKLKGIAVLVISHRPSVLSVVDKILI 553 Query: 213 LRDGVVEMFGARHEV 227 L+DG V ++G E+ Sbjct: 554 LQDGAVAVYGTEEEI 568 >PA1246 [R] COG4618 ABC-type protease/lipase transport system, ATPase and permease components Pae Pseudomonas aeruginosa Length = 593 Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 117/248 (47%), Positives = 156/248 (62%), Gaps = 19/248 (7%) Query: 4 LLAVNPPRESGLTLPRPEGRLSVEALSFAVPGTSRPILRGVTFKIEPGEVLGIIGPSGAG 63 LL P RE + LP P G L +E+L A PG+ LRG+T I G V+G+IGPSG+G Sbjct: 312 LLDEFPARERRMELPEPRGHLLLESLDAAPPGSEARTLRGLTLAIPAGSVVGVIGPSGSG 371 Query: 64 KSTLARHIVGVQAPSAGAVRLDGSDVSSWIRSSLGEHLGYLPQDIELFADTVAANICRFK 123 KS+LAR ++G+ G+VRLDG+++ + R +LG +GYLPQDIELFA TVA NI RF Sbjct: 372 KSSLARVVLGIWPTLHGSVRLDGAEIRQYERETLGPRIGYLPQDIELFAGTVAENIARFG 431 Query: 124 DGDDKDIILAARMADVHEMILRL-------------------AXRIGLARAVYGNPSLVV 164 + ++ AAR+A VHE++LRL RI LARA+YG P+LVV Sbjct: 432 EVQADKVVEAARLAGVHELVLRLPQGYDTVLGVGGAGLSGGQRQRIALARALYGAPTLVV 491 Query: 165 LDEPSSNLDAEGDAALAECITELKKRGTTVVIISHRPATIGVADKLLVLRDGVVEMFGAR 224 LDEP+SNLD G+ AL I LK RG TV++I+HR +G AD+LL L G + ++G R Sbjct: 492 LDEPNSNLDDSGEQALLAAIQALKARGCTVLLITHRAGVLGCADRLLALNAGQLHLYGER 551 Query: 225 HEVLSRLT 232 +VL+ L Sbjct: 552 DQVLAALN 559