BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0210.0019.p (516 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1171 [M] COG2951 Membrane-bound lytic murein transglycosylase ... 345 1e-94 PA3992 [M] COG2951 Membrane-bound lytic murein transglycosylase ... 293 8e-79 mlr3027 [M] COG2951 Membrane-bound lytic murein transglycosylase... 271 3e-72 SMc04024 [M] COG2951 Membrane-bound lytic murein transglycosylas... 267 6e-71 BMEII0024 [M] COG2951 Membrane-bound lytic murein transglycosyla... 265 3e-70 >PA1171 [M] COG2951 Membrane-bound lytic murein transglycosylase B Pae Pseudomonas aeruginosa Length = 398 Score = 345 bits (886), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 173/365 (47%), Positives = 234/365 (64%) Query: 86 ASDFPNCVAAMWPDAARRNISQENFERFTAGLTPDLRIMDLMDSQPEFTKAIWDYLDILV 145 AS FP+C+A + A + IS +++ERFT+GL DL ++DL+D+QPEFT +WDYL LV Sbjct: 22 ASSFPSCLAGLQKKAQAQGISADSYERFTSGLQADLSVLDLLDAQPEFTTPLWDYLAGLV 81 Query: 146 SDTRLAKGREILAKYKPQFDATEKAYGVDRYIIAAIWGIESNYSTQMGDRNVVQSTATLA 205 + R++ G+ +LA++ D YGVD+Y + A+WG+ES+Y G R ++ S +TL+ Sbjct: 82 DEQRVSDGKAMLAQHDKLLDQVAARYGVDKYTVVAVWGVESDYGRIFGKRPLLTSLSTLS 141 Query: 206 CIGRRQAYFKDEFLSALEILNRGDLRPEQMRGSWAGAFGPTQFMPTAFKRYAVDGDGDGR 265 C GRRQ++F+ EFL+ L++L GD+R + GSWAGAFG TQFMP+ + R AVD DGDGR Sbjct: 142 CYGRRQSFFQGEFLATLKLLQAGDIRDAGITGSWAGAFGHTQFMPSTYARIAVDFDGDGR 201 Query: 266 RDVVDNPSDLIASTANNLKKDGWQTGASWGYEVVLPQGLNYMLADRAKAMPLSQWEHLGL 325 RD+V + D + STAN LKK GW+TG WGYEV +P LA R K PLS W G+ Sbjct: 202 RDLVGSVPDALGSTANYLKKAGWRTGQPWGYEVKVPADFPASLAGRGKRQPLSAWVARGV 261 Query: 326 KRPNGQPFPRPSDKAYLLAPAGAEGPGFLMLQNFRVIMKYNPAEAYALAIGHFADRLRGG 385 +R +GQP P +KA +L PAGA+GP FL+ +N+ I YN AE+YALAI +DRLRGG Sbjct: 262 RRVDGQPLPGGDEKAAILLPAGAQGPAFLVYRNYDAIYSYNAAESYALAIALLSDRLRGG 321 Query: 386 QPFAQPWPRQERVLSRAERLELQQLLAQRGFYKGTPDGQFGGQTXGAGRRLCHRRGAGAA 445 WP + +SR ER +LQ+ L RG+ G DG G T A + R G A Sbjct: 322 SGLVASWPTDDPGISRLERKQLQKALLARGYDIGEADGLIGTSTRKAIQAEQKRLGLTPA 381 Query: 446 AGAVG 450 G G Sbjct: 382 DGRAG 386 >PA3992 [M] COG2951 Membrane-bound lytic murein transglycosylase B Pae Pseudomonas aeruginosa Length = 448 Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 213/351 (60%), Gaps = 8/351 (2%) Query: 97 WPDAARRN-----ISQENFERFTAGLTPDLRIMDLMDSQPEFTKAIWDYLDILVSDTRLA 151 W DA R+ I + F+R AG+ PD +++ SQPEFT+ +W YL+ + R+ Sbjct: 79 WRDAFRQQALAGGIDAQTFDRAFAGVQPDPAVVEADRSQPEFTRPVWKYLEGALDPLRVR 138 Query: 152 KGREILAKYKPQFDATEKAYGVDRYIIAAIWGIESNYSTQMGDRNVVQSTATLACIGRRQ 211 +G+ LA++ + Y VD + AIWG+ESNY + MG++NV++S ATLA GRR Sbjct: 139 QGQARLAQHARILGEVDARYAVDADAVVAIWGMESNYGSHMGNKNVIRSLATLAYEGRRP 198 Query: 212 AYFKDEFLSALEILNRGDLRPEQMRGSWAGAFGPTQFMPTAFKRYAVDGDGDGRRDVVDN 271 + + L+AL+IL GD+ M GSWAGA G TQF+PT +YAVD DGDG+RD+ + Sbjct: 199 EFAHAQLLAALKILQHGDVPASFMIGSWAGAMGQTQFIPTTHNQYAVDFDGDGKRDIWGS 258 Query: 272 PSDLIASTANNLKKDGWQTGASWGYEVVLPQGLNYMLADRAKAMPLSQWEHLGLKRPNGQ 331 P D +ASTAN LK GW G WG+EV LP G +Y LA+ PL +W+ +G++ NG Sbjct: 259 PGDALASTANYLKASGWIAGQPWGFEVRLPAGFDYSLAELTIRKPLGEWQGMGVQGVNGG 318 Query: 332 PFPR--PSDKAYLLAPAGAEGPGFLMLQNFRVIMKYNPAEAYALAIGHFADRLRGGQPFA 389 P P ++A LL PAG GP FL+L NFR I+KYN + AYALA+G AD +GG Sbjct: 319 PLPSGLSGEQASLLLPAGHRGPAFLVLHNFRAILKYNNSSAYALAVGLLADSFKGGGRIV 378 Query: 390 QPWPRQERVLSRAERLELQQLLAQRGFYKGTPDGQFGGQTXGAGRRLCHRR 440 WP ++ LSR++R+ELQ+ LA RG G DG G T A R C + Sbjct: 379 GAWPLEDVPLSRSQRIELQRQLAARGHDPGAVDGIIGANTRKA-IRACQQE 428 >mlr3027 [M] COG2951 Membrane-bound lytic murein transglycosylase B Mlo Mesorhizobium loti Length = 418 Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 144/319 (45%), Positives = 198/319 (62%), Gaps = 10/319 (3%) Query: 119 PDLRIMDLMDSQPEFTKAIWDYLDILVSDTRLAKGREILAKYKPQFDATEKAYGVDRYII 178 PD +++ +QPEFT WDY D V D +A G+++ K+KP D E +GVDRYI+ Sbjct: 78 PDPVVLEKARTQPEFTAPAWDYFDNRVHDQSVAVGQQMAKKWKPWLDRIEARFGVDRYIL 137 Query: 179 AAIWGIESNYSTQMGD----RNVVQSTATLACIG-RRQAYFKDEFLSALEILNRGDLRPE 233 AIW +ESNY + RNV++S ATL +R Y + + ++AL+IL GD+ Sbjct: 138 LAIWSMESNYGEILKRDDIMRNVIRSLATLGYGDPKRSKYARTQLVAALKILQTGDIDES 197 Query: 234 QMRGSWAGAFGPTQFMPTAFKRYAVDGDGDGRRDVVDNPSDLIASTANNLKKDGWQTGAS 293 + GSWAGA G TQF+PT+++ YAVD DG+G+RD+ ++ D +A++AN LKK+GWQ G + Sbjct: 198 HLMGSWAGAMGQTQFIPTSYQHYAVDMDGNGKRDIWNSIPDALATSANLLKKNGWQAGKT 257 Query: 294 WGYEVVLPQGLNYMLADRAKAMPLSQWEHLGLKRPNGQPFPRPSDKAYLLAPAGAEGPGF 353 WGYEV +P G L +K L+QW+ LG+ R +G+PF +DKA L P G GP F Sbjct: 258 WGYEVTIPAG---KLPGGSKT--LAQWQALGVVRASGKPFKNLTDKATLKVPDGRGGPAF 312 Query: 354 LMLQNFRVIMKYNPAEAYALAIGHFADRLRGGQPFAQPWPRQERVLSRAERLELQQLLAQ 413 LM++NF VI YN A+ YALA+G AD + GG Q W R L+ ER ELQ+ L+Q Sbjct: 313 LMVRNFSVIKAYNNADKYALAVGLLADEIAGGSGLVQDWKRPFTKLTFEERQELQKRLSQ 372 Query: 414 RGFYKGTPDGQFGGQTXGA 432 G Y G DG+ G T A Sbjct: 373 HGLYDGKFDGKIGDGTKTA 391 >SMc04024 [M] COG2951 Membrane-bound lytic murein transglycosylase B Sme Sinorhizobium meliloti Length = 405 Score = 267 bits (682), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 149/365 (40%), Positives = 213/365 (58%), Gaps = 11/365 (3%) Query: 84 QAASDFPNCVAAMWPDAARRNISQENFERFTAGL-TPDLRIMDLMDSQPEFTKAIWDYLD 142 +A F N + + AA+ ISQ + + AG+ TPD +++ QPEF IW+Y+D Sbjct: 28 RADQGFQNWINNFYATAAKNGISQATYRKAFAGVKTPDPAVLEKAAYQPEFKHKIWEYVD 87 Query: 143 ILVSDTRLAKGREILAKYKPQFDATEKAYGVDRYIIAAIWGIESNYST--QMGDR--NVV 198 V+ G+E+ AK+ +A E+ YGVD+ I+ AIW +ESNY Q DR V Sbjct: 88 ARVNPYTKRIGQEMAAKHARTLNALERHYGVDKSILLAIWSMESNYGAILQKDDRLHYVP 147 Query: 199 QSTATLACI-GRRQAYFKDEFLSALEILNRGDLRPEQMRGSWAGAFGPTQFMPTAFKRYA 257 ++ ATLA RR + K + ++AL+IL GD+ P ++ GSWAGA G TQF+PT++ YA Sbjct: 148 RALATLAYADSRRSKFAKTQLIAALKILQSGDITPRELTGSWAGAMGHTQFIPTSYLLYA 207 Query: 258 VDGDGDGRRDVVDNPSDLIASTANNLKKDGWQTGASWGYEVVLP-QGLNYMLADRAKAMP 316 VD DG+G RD+ ++ D +A+ AN L+K+GW+ G +WGYEVV P G Y + Sbjct: 208 VDADGNGHRDIWNSVPDALATAANLLRKNGWRPGETWGYEVVPPANGAKY----SGQTKT 263 Query: 317 LSQWEHLGLKRPNGQPFPRPSDKAYLLAPAGAEGPGFLMLQNFRVIMKYNPAEAYALAIG 376 L QW LG RP G+ F P +A L P G GPGFLM +NF VI +YN +++YAL +G Sbjct: 264 LGQWAALGFARPGGKGFSNPKMRAELKLPGGGNGPGFLMTKNFFVIKRYNASDSYALGVG 323 Query: 377 HFADRLRGGQPFAQPWPRQERVLSRAERLELQQLLAQRGFYKGTPDGQFGGQTXGAGRRL 436 AD++ G Q WPR + L +E+ ELQ L + G+Y G DG FG + A + Sbjct: 324 LLADQIAGYAGMQQRWPRPDGSLDISEKFELQNRLKELGYYDGEVDGNFGSGSKAAIQAF 383 Query: 437 CHRRG 441 ++ G Sbjct: 384 QNQNG 388 >BMEII0024 [M] COG2951 Membrane-bound lytic murein transglycosylase B Bme Brucella melitensis Length = 412 Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 142/363 (39%), Positives = 213/363 (58%), Gaps = 10/363 (2%) Query: 85 AASDFPNCVAAMWPDAARRNISQENFERFTAGLT-PDLRIMDLMDSQPEFTKAIWDYLDI 143 A + F +A P A + I+ F+R G+ PD +++ QPEFT+ +W+Y+D Sbjct: 36 ADAGFRQWIANFRPVAIKSGIAPSTFDRAFRGVNEPDPVVLEKARYQPEFTEPVWNYIDN 95 Query: 144 LVSDTRLAKGREILAKYKPQFDATEKAYGVDRYIIAAIWGIESNYSTQMGD----RNVVQ 199 V++ +A G+ + K+ E Y VDR+I+ AIW +ESNY + R+ ++ Sbjct: 96 RVNEQSVAVGQNMARKWGQWLQRIEHHYSVDRHILLAIWSMESNYGEILKRDDVMRDAIR 155 Query: 200 STATLACI-GRRQAYFKDEFLSALEILNRGDLRPEQMRGSWAGAFGPTQFMPTAFKRYAV 258 S ATLA RR Y + + ++A++IL GD+ + GSWAGA G TQF+PT+++ YAV Sbjct: 156 SLATLAYADARRAKYGRTQLIAAMKILQTGDIERGHLSGSWAGALGHTQFIPTSYQAYAV 215 Query: 259 DGDGDGRRDVVDNPSDLIASTANNLKKDGWQTGASWGYEVVLPQGLNYMLADRAKAMPLS 318 D DG+G+RD+ ++ D + + AN L ++GWQ G +WGYEV+LP G + + ++ ++ Sbjct: 216 DMDGNGKRDIWNSVPDALGTAANLLHRNGWQPGRTWGYEVMLPAGRKFP----SGSLTIA 271 Query: 319 QWEHLGLKRPNGQPFPRPSDKAYLLAPAGAEGPGFLMLQNFRVIMKYNPAEAYALAIGHF 378 +W+ +GL R NG+ FP P +KA L P G +GP FLM +NF V+ +YN A+ YALA+G Sbjct: 272 EWQQIGLVRANGRAFPDPHEKATLKVPDGHQGPAFLMTKNFFVLKRYNNADKYALAVGLL 331 Query: 379 ADRLRGGQPFAQPWPRQERVLSRAERLELQQLLAQRGFYKGTPDGQFGGQTXGAGRRLCH 438 ADR+ G Q Q W R +S ERLELQ L G+Y G DG+ G + A Sbjct: 332 ADRIGGYQGLRQDWNRPFTPISMNERLELQTHLKALGYYDGKIDGKIGATSRAALEAFQQ 391 Query: 439 RRG 441 R G Sbjct: 392 RNG 394