BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0209.0002.p (247 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc03119 [E] COG0410 ABC-type branched-chain amino acid transpor... 303 3e-82 AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport... 293 2e-79 BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transpo... 293 2e-79 RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport... 283 3e-76 TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ... 185 9e-47 >SMc03119 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 233 Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 142/230 (61%), Positives = 178/230 (77%) Query: 18 VLTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTTTLKSVMGVIGKRSGSIRF 77 +L V L AWYGESH+LHG++ V GE+VTLLGRNG GKTTTL+++MG++ +R G I F Sbjct: 4 LLKVAGLNAWYGESHVLHGVDMTVGEGEMVTLLGRNGVGKTTTLRAIMGIVRERRGEISF 63 Query: 78 DNQEIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPVVRPGGLPLDQIFTLFPNL 137 ++++R ++A G+ F PEERGIF++L V ENLLLPP V GG+ +D+IF LFPNL Sbjct: 64 AGEDLMRVPLHRVAHRGLGFVPEERGIFSTLTVYENLLLPPAVAKGGMTIDEIFELFPNL 123 Query: 138 KERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIARLKSQG 197 ER S GTKLSGGEQQMLAIARILRTG R ++LDEPTEGLAPVI+Q+IG + +LK +G Sbjct: 124 HERRNSAGTKLSGGEQQMLAIARILRTGVRMMLLDEPTEGLAPVIVQRIGEVLKKLKERG 183 Query: 198 FTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMDKLHTYLGV 247 T+LLVEQNFRFAS VADR+Y+++HG+V F SELS MD LH LGV Sbjct: 184 MTVLLVEQNFRFASKVADRFYLMDHGRVAGEFPVSELSGRMDMLHDVLGV 233 >AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 233 Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 136/232 (58%), Positives = 180/232 (77%) Query: 16 ADVLTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTTTLKSVMGVIGKRSGSI 75 A +L V +L++WYGES LHG++ V GE +T+LGRNG GKTTTL+++MG+I R G I Sbjct: 2 AAMLEVSNLKSWYGESQALHGVDLTVGEGETITILGRNGVGKTTTLRTIMGIIRNRKGVI 61 Query: 76 RFDNQEIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPVVRPGGLPLDQIFTLFP 135 + ++++ + A+ GI F PEERGIFA+L V ENL+LPPVV GG+ LD+I+ LFP Sbjct: 62 KLGGKDMMPVPLHRTAKYGIGFVPEERGIFATLSVEENLMLPPVVASGGMTLDEIYELFP 121 Query: 136 NLKERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIARLKS 195 NL ER TS GTKLSGGEQQMLA+ARILRTG + L+LDEPTEGLAPVI+Q+IG + +LKS Sbjct: 122 NLHERRTSPGTKLSGGEQQMLAMARILRTGVKVLLLDEPTEGLAPVIVQRIGEVLQKLKS 181 Query: 196 QGFTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMDKLHTYLGV 247 +G T++LVEQNFRFAS +ADR+Y+++HG+++ F ELSA M +L+ LGV Sbjct: 182 RGMTVVLVEQNFRFASRIADRFYLMDHGQMVSNFPVGELSARMGELNKVLGV 233 >BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 274 Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 143/235 (60%), Positives = 179/235 (76%), Gaps = 5/235 (2%) Query: 18 VLTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTTTLKSVMGVIGKRSGSIRF 77 +L+V+ L AWYGESH L G++ ++ GE +TLLGRNG GKTTTL+++MG+I KR+G+I Sbjct: 40 LLSVRGLYAWYGESHALQGVDLDIWPGETITLLGRNGVGKTTTLRAIMGIIRKRTGTITL 99 Query: 78 DNQEIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPVVRPGG-----LPLDQIFT 132 D ++I+R +IA G+ F PEERGIFASL+V ENLLLPPVV GG + LD+I+ Sbjct: 100 DGKDIMRVPLHRIAYEGLGFVPEERGIFASLNVHENLLLPPVVAKGGGSQGAMSLDEIYE 159 Query: 133 LFPNLKERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIAR 192 LFPNL ER S GTKLSGGEQQMLAIARILRTG + L+LDEPTEGLAPVI+Q+IG + Sbjct: 160 LFPNLYERRNSPGTKLSGGEQQMLAIARILRTGVKVLLLDEPTEGLAPVIVQRIGDVLVE 219 Query: 193 LKSQGFTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMDKLHTYLGV 247 LK +G T+LLVEQNFRFA+ VADR+Y+++HG V D F +EL A M L LGV Sbjct: 220 LKKRGMTVLLVEQNFRFAAKVADRFYLMDHGVVTDNFPTTELPARMAALTQALGV 274 >RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 246 Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 135/241 (56%), Positives = 177/241 (73%), Gaps = 12/241 (4%) Query: 19 LTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTTTLKSVMGVIGKRSGSIRFD 78 L +KDL AWYGESHILHG++ V GEVVTLLGRNGAG+TTTL+++MG++G R GSI Sbjct: 6 LQIKDLHAWYGESHILHGVDLTVNRGEVVTLLGRNGAGRTTTLRAIMGLVGTRKGSIVVH 65 Query: 79 NQ-----EIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPVVR-------PGGLP 126 + E I + +IA GI +CPEERGIFASL ENLLLPPV++ G+ Sbjct: 66 DDAGQGVETIGLPTHRIAHCGIGYCPEERGIFASLSCEENLLLPPVLKGQVATRGNAGMS 125 Query: 127 LDQIFTLFPNLKERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLAPVIIQQI 186 + +I+ +FPNLKER SQGT+LSGGEQQMLA+ RILRTGA L+LDE +EGLAPVI+Q + Sbjct: 126 VAEIYEMFPNLKERRNSQGTRLSGGEQQMLAVGRILRTGANLLLLDEISEGLAPVIVQAL 185 Query: 187 GHTIARLKSQGFTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMDKLHTYLG 246 I LK +G+T+++VEQNFRFA+ +ADR+Y++EHG++++ F ++L M LH LG Sbjct: 186 ARMILMLKKRGYTVVMVEQNFRFAAPLADRFYVMEHGRIVERFEAAQLQDKMPILHELLG 245 Query: 247 V 247 V Sbjct: 246 V 246 >TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 239 Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 105/234 (44%), Positives = 143/234 (61%), Gaps = 4/234 (1%) Query: 18 VLTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTTTLKSVMGVIGKRSGSIRF 77 VL V+ L +YG H + GI+ V G++VTL+G NGAGKTTTL ++ G++ + G I F Sbjct: 5 VLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIF 64 Query: 78 DNQEIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPVVRPG--GLP--LDQIFTL 133 + Q+I + I R+GIA PE R IF L V ENL++ R G+ L+ IF+L Sbjct: 65 NGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSL 124 Query: 134 FPNLKERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIARL 193 FP LKERL G LSGGEQQMLAI R L + + LM+DEP+ GLAP+++ ++ I ++ Sbjct: 125 FPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKI 184 Query: 194 KSQGFTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMDKLHTYLGV 247 +G TILLVEQN A VA Y++E G+++ SEL N YLGV Sbjct: 185 NQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVRKAYLGV 238