BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0208.0009.p         (202 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1267 [K] COG0583 Transcriptional regulator Rso Ralstonia sola...   150   2e-36
BMEII1077 [K] COG0583 Transcriptional regulator Bme Brucella mel...   132   5e-31
mlr2195 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ...   130   3e-30
PA0877 [K] COG0583 Transcriptional regulator Pae Pseudomonas aer...   129   4e-30
STM0859 [K] COG0583 Transcriptional regulator Sty Salmonella typ...   110   2e-24

>RSp1267 [K] COG0583 Transcriptional regulator Rso Ralstonia solanacearum
          Length = 294

 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 105/140 (75%)

Query: 1   MRFDLTDLQLFIAVSDARSITQGAARANLALASASERIKGLEEALGVALLKRGRRGVELT 60
           MRFDLTDL+LF+  +++ SIT GA RA+L LASAS RI+G+E ALGV LL R RRGVE T
Sbjct: 1   MRFDLTDLRLFLHTAESGSITAGAERAHLTLASASARIRGMEAALGVPLLTRNRRGVETT 60

Query: 61  AAGESLLGHARIVIHNVEALQSDLAAYASGVRANVLLLANTSGLSEHLPRALAAFLHEHP 120
           AAG +L+ HAR+V+  +E ++ +L  YA G++ +V LL+NT+ ++E LP  L+AFL +HP
Sbjct: 61  AAGRTLVHHARVVLQQMERMRGELGEYARGLKGHVRLLSNTAAMTEFLPETLSAFLAQHP 120

Query: 121 DISVDVEERESTDIATAIAS 140
           ++ +D+EE  S +I  A+A 
Sbjct: 121 EVDIDLEELVSHEIVEAVAQ 140


>BMEII1077 [K] COG0583 Transcriptional regulator Bme Brucella melitensis
          Length = 294

 Score =  132 bits (332), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 63/138 (45%), Positives = 100/138 (72%)

Query: 1   MRFDLTDLQLFIAVSDARSITQGAARANLALASASERIKGLEEALGVALLKRGRRGVELT 60
           MRFD+TDL+LF+++++  SIT GAA  N+AL +AS R++G+EE  GVALL R R GV +T
Sbjct: 1   MRFDVTDLRLFVSIAETGSITHGAAMVNMALGAASARVRGMEELAGVALLNRERLGVSIT 60

Query: 61  AAGESLLGHARIVIHNVEALQSDLAAYASGVRANVLLLANTSGLSEHLPRALAAFLHEHP 120
            AG +LL H RIV+  +  + S+L  +A G++ +V L +NT+ L+E LP AL++FL ++P
Sbjct: 61  PAGRALLQHGRIVLQQLGRMHSELDEFAHGLKGHVRLFSNTNALAEFLPVALSSFLMDNP 120

Query: 121 DISVDVEERESTDIATAI 138
            +++D++E  S +I  ++
Sbjct: 121 GVNIDLQEHLSDEIVRSV 138


>mlr2195 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti
          Length = 397

 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 103/142 (72%)

Query: 1   MRFDLTDLQLFIAVSDARSITQGAARANLALASASERIKGLEEALGVALLKRGRRGVELT 60
           MRFDLTDL+LF+ V++  SIT GA  A LALASAS RIKG+EE LG  LL+R RRGV  T
Sbjct: 1   MRFDLTDLRLFLLVAERGSITHGAELAGLALASASARIKGMEERLGAPLLERRRRGVVPT 60

Query: 61  AAGESLLGHARIVIHNVEALQSDLAAYASGVRANVLLLANTSGLSEHLPRALAAFLHEHP 120
           AAG++LL HAR V + +EA+  DL AYA G+RA V L+ANT+  +E L   L AFL  HP
Sbjct: 61  AAGQALLHHARAVQNQIEAMAGDLRAYAGGLRARVRLMANTAATAELLRDILPAFLVAHP 120

Query: 121 DISVDVEERESTDIATAIASAS 142
            I +D++ER S +IA A+AS +
Sbjct: 121 GIDIDLDERPSHEIAEAVASGA 142


>PA0877 [K] COG0583 Transcriptional regulator Pae Pseudomonas aeruginosa
          Length = 298

 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/142 (47%), Positives = 93/142 (65%)

Query: 1   MRFDLTDLQLFIAVSDARSITQGAARANLALASASERIKGLEEALGVALLKRGRRGVELT 60
           M FDL DL+LFI ++++ S+TQGA RA L+ A+AS R+K LE  LG  LL R  RGVELT
Sbjct: 1   MHFDLADLRLFIHIAESPSLTQGARRAFLSPAAASARVKALEGQLGSRLLYRDSRGVELT 60

Query: 61  AAGESLLGHARIVIHNVEALQSDLAAYASGVRANVLLLANTSGLSEHLPRALAAFLHEHP 120
            AG+ LL HAR+++  VE L+S+   Y S    ++ + ANT+ ++E LP  LA FL   P
Sbjct: 61  PAGQRLLQHARLIMRQVEYLKSEFTEYGSDAAGHIRIFANTTAVTEFLPEILAGFLAARP 120

Query: 121 DISVDVEERESTDIATAIASAS 142
            ++VD++ER S DI   +   S
Sbjct: 121 GVTVDLQERLSRDIVRGVLDGS 142


>STM0859 [K] COG0583 Transcriptional regulator Sty Salmonella typhimurium
           LT2
          Length = 296

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 94/138 (68%)

Query: 1   MRFDLTDLQLFIAVSDARSITQGAARANLALASASERIKGLEEALGVALLKRGRRGVELT 60
           M FD+ DL+LF+A+S+  SIT+GA +  ++ AS S RI+ LE+++ + LL R  +G+ L+
Sbjct: 1   MHFDIKDLKLFLAISEEGSITRGAEKTYMSAASGSVRIRNLEQSINLRLLYRSSKGITLS 60

Query: 61  AAGESLLGHARIVIHNVEALQSDLAAYASGVRANVLLLANTSGLSEHLPRALAAFLHEHP 120
           +AGE+   HA ++++ +E L+SD+  +  G++ +V + ++ + ++E+LP  L+ FL  + 
Sbjct: 61  SAGETFKHHASLIVNQMEMLRSDMQEHVKGIKGHVRIFSSITAIAEYLPPLLSHFLTLYN 120

Query: 121 DISVDVEERESTDIATAI 138
           D+++D+ E  S +I  ++
Sbjct: 121 DVNIDLREYPSPEIVRSV 138