BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0207.0006.p (333 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGpT148 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 286 4e-77 SMa2085 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 277 2e-74 AGl2785 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 276 6e-74 AGl3202 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 266 3e-71 mlr6083 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 257 2e-68 >AGpT148 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 333 Score = 286 bits (733), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 144/319 (45%), Positives = 211/319 (66%) Query: 10 IGLQAVSRIAQLVAVILVIATFNFVLVRAAPGDPAQVMAGQSGASDPKLLDDLRKEYGLD 69 +G + + Q V + VI T F +++ APGD A MA +SGA+ + + D+R+ +GLD Sbjct: 12 VGRSLLRNLIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQETVADIRRAFGLD 71 Query: 70 KPYFVQLVSHLGRVVRLDLGYSYRQRRPVVDLILERLPATLLLTVTAFCLALLIGTALGA 129 P QL ++ + LG S R PV DLI+ERLP TL L V A +ALL+G A G Sbjct: 72 LPLLDQLANYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLVGIAAGT 131 Query: 130 LAGLAAGSVLDTVFTVLSLVLYATPVFWLGLMLVLVFSVTLGWLPPFGYETINVQLSPVE 189 + L A D + +V SL+ Y+ P FW+GL+ ++VFSV LGWLP G +TI Sbjct: 132 IMALNATRAADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGGMKTIGASSGGFG 191 Query: 190 HALDIMKHMIMPVTSLAAIYLAIYARLMRSSIIEVAQQDFIKTARAKGLSGTRIVVGHML 249 +D + + ++P TSLA Y+AIYARL RSSI+EV QD ++TA+AKGL+ ++V+ H+L Sbjct: 192 WLIDRVSYALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAKGLAPRQVVLRHVL 251 Query: 250 RNALVPVATVAGMQAGALVGGAVVIETVFAWPGLGRLTFEALLQRDYPVLLGIFLILSIV 309 RNAL+P+ TVAG+ ++GGA+VIETVF+WPG+GRL F+A++ R+Y +LLGI L+ S++ Sbjct: 252 RNALIPITTVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREYTLLLGIMLVSSVL 311 Query: 310 VIALNLLTDLVYRLIDPRM 328 VI +N + D++ +DPR+ Sbjct: 312 VICVNAIVDIIQAALDPRI 330 >SMa2085 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Sme Sinorhizobium meliloti Length = 328 Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 149/309 (48%), Positives = 210/309 (67%) Query: 20 QLVAVILVIATFNFVLVRAAPGDPAQVMAGQSGASDPKLLDDLRKEYGLDKPYFVQLVSH 79 Q V IL I NF L++ APGD A V+AG++G++ + + LR +GLD P QL ++ Sbjct: 17 QAVPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLDSPVLEQLATY 76 Query: 80 LGRVVRLDLGYSYRQRRPVVDLILERLPATLLLTVTAFCLALLIGTALGALAGLAAGSVL 139 LG + + LG+S R PV DLI +RLP TL L A +A+L+G LG+L AG + Sbjct: 77 LGNLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGSLMASFAGRIP 136 Query: 140 DTVFTVLSLVLYATPVFWLGLMLVLVFSVTLGWLPPFGYETINVQLSPVEHALDIMKHMI 199 D + ++ SL+ Y+ P FW+GLML+++FSV LGWLP G TI QL LD ++M+ Sbjct: 137 DRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGSQLKGFPALLDKARYMV 196 Query: 200 MPVTSLAAIYLAIYARLMRSSIIEVAQQDFIKTARAKGLSGTRIVVGHMLRNALVPVATV 259 +P TSLA Y+AIYARL R++++EV DF++TA AKGL+ + H+LRNAL+P+ T+ Sbjct: 197 LPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTARHILRNALIPITTM 256 Query: 260 AGMQAGALVGGAVVIETVFAWPGLGRLTFEALLQRDYPVLLGIFLILSIVVIALNLLTDL 319 AGM G ++GGAVV+ETV++WPGLGRL FEA++ RD+ VLLGI L+ S++VI N DL Sbjct: 257 AGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLSSLLVIIANAAVDL 316 Query: 320 VYRLIDPRM 328 V+ +DPR+ Sbjct: 317 VHAWLDPRI 325 >AGl2785 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 316 Score = 276 bits (705), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 146/309 (47%), Positives = 214/309 (69%) Query: 20 QLVAVILVIATFNFVLVRAAPGDPAQVMAGQSGASDPKLLDDLRKEYGLDKPYFVQLVSH 79 Q V +L I NF L++ APGD A V+A ++G++ + + ++R +GLD P QL+++ Sbjct: 4 QAVPTVLGIVILNFFLLQLAPGDAADVLAAEAGSATVETMAEMRSRFGLDLPIVHQLMNY 63 Query: 80 LGRVVRLDLGYSYRQRRPVVDLILERLPATLLLTVTAFCLALLIGTALGALAGLAAGSVL 139 LG + + LG+S R PV DLI +RLP TL L A +A+ +G LG++ L +G + Sbjct: 64 LGNLAQFSLGFSPRYGMPVADLIGQRLPGTLALMGAALGIAIFVGVFLGSIMALFSGKLP 123 Query: 140 DTVFTVLSLVLYATPVFWLGLMLVLVFSVTLGWLPPFGYETINVQLSPVEHALDIMKHMI 199 D + ++ SL+ Y+ P FW+GLML+L FSV LGWLP G TI L+ LD +++++ Sbjct: 124 DRIISIGSLIFYSVPGFWIGLMLILTFSVKLGWLPSGGDSTIGSSLTGFAAFLDRLRYIV 183 Query: 200 MPVTSLAAIYLAIYARLMRSSIIEVAQQDFIKTARAKGLSGTRIVVGHMLRNALVPVATV 259 +P SLA +LAIYARL R++++EV QD+++TARAKG+S R++ H+LRNAL+P+ T+ Sbjct: 184 LPALSLALYFLAIYARLTRAAMLEVKSQDYVRTARAKGVSPFRLITRHILRNALIPITTM 243 Query: 260 AGMQAGALVGGAVVIETVFAWPGLGRLTFEALLQRDYPVLLGIFLILSIVVIALNLLTDL 319 AGM G L+GGAVV+ETVF+WPGLGRL FEA++ RD+ VLLGI L+ S+VVI +N DL Sbjct: 244 AGMHIGGLLGGAVVVETVFSWPGLGRLAFEAVMARDFSVLLGILLLSSLVVIIVNAAVDL 303 Query: 320 VYRLIDPRM 328 + +DPR+ Sbjct: 304 LQAWLDPRI 312 >AGl3202 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 329 Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/312 (46%), Positives = 201/312 (64%) Query: 22 VAVILVIATFNFVLVRAAPGDPAQVMAGQSGASDPKLLDDLRKEYGLDKPYFVQLVSHLG 81 + V+L++ F FVL+ A GD G D L D LR++YGL+ + + Sbjct: 16 IPVLLIVLIFTFVLLENASGDAVDAYLVSIGGGDAGLRDALREQYGLNGSMLARFWLYAS 75 Query: 82 RVVRLDLGYSYRQRRPVVDLILERLPATLLLTVTAFCLALLIGTALGALAGLAAGSVLDT 141 V+RLD G+S RPV+ LILERLP TLLL +A LA ++GT LG +AG G ++D Sbjct: 76 SVLRLDFGWSLAFDRPVLGLILERLPNTLLLMGSATALAFILGTTLGIVAGARPGGLMDR 135 Query: 142 VFTVLSLVLYATPVFWLGLMLVLVFSVTLGWLPPFGYETINVQLSPVEHALDIMKHMIMP 201 V + LSL LYATP FWLGL+L +VF+V L WLP G ETI ALDI +H+++P Sbjct: 136 VLSTLSLALYATPGFWLGLVLAIVFAVQLRWLPTSGIETIASGKQGFARALDIARHLVLP 195 Query: 202 VTSLAAIYLAIYARLMRSSIIEVAQQDFIKTARAKGLSGTRIVVGHMLRNALVPVATVAG 261 V SL IYLA++ R+MR+++ + DF+ A AKGLS RIV+ H+ RNA +P+ TV G Sbjct: 196 VASLGLIYLALFLRVMRTAMAAIWPLDFVLFAEAKGLSRRRIVLRHVARNAALPLVTVLG 255 Query: 262 MQAGALVGGAVVIETVFAWPGLGRLTFEALLQRDYPVLLGIFLILSIVVIALNLLTDLVY 321 +QA ++GG+VVIE+VFA PG GRL EA+ RD P+L+GI L ++ VI +NL D++Y Sbjct: 256 LQAATMLGGSVVIESVFAIPGFGRLAQEAVSGRDTPLLMGIILTSAVFVILVNLAVDILY 315 Query: 322 RLIDPRMTTGAA 333 + DPR+ +G + Sbjct: 316 AVFDPRIGSGES 327 >mlr6083 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Mlo Mesorhizobium loti Length = 329 Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 137/314 (43%), Positives = 208/314 (66%), Gaps = 3/314 (0%) Query: 18 IAQLVAVILVIATFNFVLVRAAPGDPAQVMAGQSGAS-DPKLLDDLRKEYGLDKPYFV-Q 75 I + + +L++A NF+L R PGDPA+++ G + S + ++ R+ +GLD+P F Q Sbjct: 14 IIRAIVTLLMVAILNFILFRVIPGDPAKLLLGGARTSVTAEQIEAQRQNWGLDRPLFPDQ 73 Query: 76 LVSHLGRVVRLDLGYSYRQR-RPVVDLILERLPATLLLTVTAFCLALLIGTALGALAGLA 134 LV +L VR DLGYS++ R R V DLILE LPAT++L A A++IG LG AG Sbjct: 74 LVDYLSATVRGDLGYSFKFRGRHVADLILEHLPATIILVGIAQLTAIVIGVMLGIYAGWR 133 Query: 135 AGSVLDTVFTVLSLVLYATPVFWLGLMLVLVFSVTLGWLPPFGYETINVQLSPVEHALDI 194 G LD + T SL+LY+TP FW+ ++LV++FS +LGWLP +G + +S V+ LD Sbjct: 134 RGGTLDNLATGTSLLLYSTPSFWVAMILVVIFSTSLGWLPGYGAYSPGGTISFVDSLLDH 193 Query: 195 MKHMIMPVTSLAAIYLAIYARLMRSSIIEVAQQDFIKTARAKGLSGTRIVVGHMLRNALV 254 ++H+ +PVT++A + Y + R+++ +V +D++ TARAKGL+ ++++ H RNA++ Sbjct: 194 LRHLALPVTAVALGLIGQYVVVARAAMSDVVTEDYMVTARAKGLTNGQMLMRHAFRNAML 253 Query: 255 PVATVAGMQAGALVGGAVVIETVFAWPGLGRLTFEALLQRDYPVLLGIFLILSIVVIALN 314 PV T+ + G +V GA+ +E VFAWPG+G LT EAL RDYP+L GIFL+L ++ N Sbjct: 254 PVVTLIALNLGYVVAGAITVEAVFAWPGIGGLTVEALNARDYPILQGIFLLLGASIVVAN 313 Query: 315 LLTDLVYRLIDPRM 328 L+ DL Y L+DPR+ Sbjct: 314 LVADLAYGLLDPRV 327