BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0203.0038.p         (173 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll8139 [S] COG3652 Predicted outer membrane protein Mlo Mesorhi...   247   8e-66
SMb20593 [S] COG3652 Predicted outer membrane protein Sme Sinorh...   222   3e-58
PA2134 [S] COG3652 Predicted outer membrane protein Pae Pseudomo...    64   2e-10

>mll8139 [S] COG3652 Predicted outer membrane protein Mlo Mesorhizobium loti
          Length = 174

 Score =  247 bits (631), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 128/174 (73%), Positives = 145/174 (83%), Gaps = 1/174 (0%)

Query: 1   MFVRLSIAVAALSLLNCAALAQGA-KPTDPQIAHIAYTAGVIDINAAKQAEEKASNKEIK 59
           M  R + A+AA+  ++ A  AQ A KPTDPQIAHIAYTAGV+DI AAKQA + + NKE+ 
Sbjct: 1   MLTRYTAALAAVLFVSAAPFAQAADKPTDPQIAHIAYTAGVLDIEAAKQAIKTSKNKEVV 60

Query: 60  AFAKDMARDHEAVNKQALDLVKKLKVTPEDNDTSKALSKQAADKLAELGKLKGAAYDKAY 119
           AFAKDM RDHEAVNKQALDLVKKLKV PEDN TS+ALSK A ++ A+L KLKGAA+DKAY
Sbjct: 61  AFAKDMERDHEAVNKQALDLVKKLKVKPEDNATSQALSKAAEEERAKLAKLKGAAFDKAY 120

Query: 120 IDNEVAYHKAVNTALETQLIPSASNPELKSLLQTGLKIFQGHQQHAEHVAAGLK 173
           I+NEVAYHK VN ALET LIPSASN ELKSLL+TGLKIFQGH+QHAEHVA  LK
Sbjct: 121 IENEVAYHKQVNGALETLLIPSASNAELKSLLETGLKIFQGHEQHAEHVAGMLK 174


>SMb20593 [S] COG3652 Predicted outer membrane protein Sme Sinorhizobium
           meliloti
          Length = 174

 Score =  222 bits (565), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/149 (74%), Positives = 124/149 (83%)

Query: 25  KPTDPQIAHIAYTAGVIDINAAKQAEEKASNKEIKAFAKDMARDHEAVNKQALDLVKKLK 84
           KPTDPQIAHIAYTAGV+D+ AAKQA   + NK +  FA+ M RDHE+VNKQALDLVKKL 
Sbjct: 26  KPTDPQIAHIAYTAGVLDVEAAKQAIATSKNKTVVEFAESMLRDHESVNKQALDLVKKLN 85

Query: 85  VTPEDNDTSKALSKQAADKLAELGKLKGAAYDKAYIDNEVAYHKAVNTALETQLIPSASN 144
           VTPEDNDTSK+LS+ A  K  EL KLKG  +DKAYI++EVAYHK VN ALET LIPSA N
Sbjct: 86  VTPEDNDTSKSLSQAAEAKRQELAKLKGGEFDKAYIEHEVAYHKQVNGALETLLIPSAQN 145

Query: 145 PELKSLLQTGLKIFQGHQQHAEHVAAGLK 173
            ELKSLL+TGLK+FQGHQQHAEHVAA LK
Sbjct: 146 AELKSLLETGLKLFQGHQQHAEHVAAALK 174


>PA2134 [S] COG3652 Predicted outer membrane protein Pae Pseudomonas
           aeruginosa
          Length = 190

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 10/151 (6%)

Query: 21  AQGAKPTDPQ-IAHIAYTAGVIDINAAKQAEEKASNKEIKAFAKDMARDHEAVNKQALDL 79
           AQ    T PQ     A  AGV +I A K A EK++  ++K FAK M  DH  VN +   L
Sbjct: 42  AQDMNKTAPQTFVSEASAAGVAEIEAGKMALEKSTAADVKVFAKQMIDDHGKVNAELRSL 101

Query: 80  VKKLKVTPEDNDTSKALSKQAADKLAELGKLKGAAYDKAYIDNEVAYH-KAVNTALETQL 138
            ++ K+  ED+    +L+ +A    A L  L+ A++D AY +N+VA H KAV   L TQ 
Sbjct: 102 AERKKLEVEDD---ASLTDKAK---ATLLDLRDASFDPAYANNQVAAHEKAVE--LFTQA 153

Query: 139 IPSASNPELKSLLQTGLKIFQGHQQHAEHVA 169
             + ++PEL++  +T L   + H + A  +A
Sbjct: 154 ADNLTDPELQAFAKTHLPALKHHLEMARALA 184