BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0203.0033.p         (116 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr8316 [J] COG0251 Putative translation initiation inhibitor, y...   150   8e-37
BMEII0278 [J] COG0251 Putative translation initiation inhibitor,...   144   5e-35
SMc00791 [J] COG0251 Putative translation initiation inhibitor, ...   142   2e-34
AGc3864 [J] COG0251 Putative translation initiation inhibitor, y...   135   3e-32
XF1711 [J] COG0251 Putative translation initiation inhibitor, yj...   117   8e-27

>mlr8316 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Mlo Mesorhizobium loti
          Length = 114

 Score =  150 bits (379), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 75/115 (65%), Positives = 89/115 (77%), Gaps = 2/115 (1%)

Query: 1   MSIQRFETGPRMSQAVVHGNTVYLAGVVAGKAAGGSVTDQTKDILTIIDGHLAKAGTDKS 60
           MSI+R + GPRMSQ V+HGNTVYLAG V     GG+V  QT+DIL  ID  LAKAGTDKS
Sbjct: 1   MSIRRIDVGPRMSQIVIHGNTVYLAGQVG--EPGGNVASQTRDILATIDELLAKAGTDKS 58

Query: 61  KLLSATIYITDMKTFAEMNAVWDGWVSEGNTPARATVEAKLAAPQYNVEIMVVAA 115
           K++ A I++ DM TFAEMN+ WD WV +G+TPARAT EAKLA P+Y VEI+V AA
Sbjct: 59  KIVQAIIWLADMGTFAEMNSEWDKWVPQGHTPARATGEAKLAGPEYLVEIIVTAA 113


>BMEII0278 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Bme Brucella melitensis
          Length = 128

 Score =  144 bits (363), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 70/115 (60%), Positives = 85/115 (73%), Gaps = 2/115 (1%)

Query: 1   MSIQRFETGPRMSQAVVHGNTVYLAGVVAGKAAGGSVTDQTKDILTIIDGHLAKAGTDKS 60
           MSI+R E GPRMSQAV+HGNT YLAG V     G SVT+QTK +L  ++  L + G+DK+
Sbjct: 15  MSIRRIEAGPRMSQAVIHGNTAYLAGQVGNP--GASVTEQTKAVLAEVERLLKEVGSDKT 72

Query: 61  KLLSATIYITDMKTFAEMNAVWDGWVSEGNTPARATVEAKLAAPQYNVEIMVVAA 115
           K+L A I++ DMK FAEMNAVWD WV   +TPARAT EAKLA P Y VEI++ AA
Sbjct: 73  KILQAIIWLADMKDFAEMNAVWDAWVDPAHTPARATGEAKLATPDYKVEIIITAA 127


>SMc00791 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Sme Sinorhizobium meliloti
          Length = 114

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/115 (61%), Positives = 87/115 (75%), Gaps = 2/115 (1%)

Query: 1   MSIQRFETGPRMSQAVVHGNTVYLAGVVAGKAAGGSVTDQTKDILTIIDGHLAKAGTDKS 60
           M I+RFETGPRMSQAVV+ NTVYLAG V    AG  V  QTK  L  +D  LA AGTDK+
Sbjct: 1   MEIKRFETGPRMSQAVVYNNTVYLAGQVGN--AGDDVVTQTKQALAEVDRLLALAGTDKT 58

Query: 61  KLLSATIYITDMKTFAEMNAVWDGWVSEGNTPARATVEAKLAAPQYNVEIMVVAA 115
           ++LSAT+++ DM  FA+MN+VWD WV +G+ PARAT EAKLA P+Y VE++V AA
Sbjct: 59  RILSATVWLADMADFAKMNSVWDAWVPQGHAPARATGEAKLATPEYLVEVIVTAA 113


>AGc3864 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 124

 Score =  135 bits (339), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/115 (59%), Positives = 80/115 (69%), Gaps = 3/115 (2%)

Query: 1   MSIQRFETGPRMSQAVVHGNTVYLAGVVAGKAAGGSVTDQTKDILTIIDGHLAKAGTDKS 60
           M+I+R E G RMS AVVHGNTVYLAG V     G  VT+Q+K  L  +D  LA AG+DKS
Sbjct: 12  MTIKRIEPGKRMSGAVVHGNTVYLAGQVG---EGTGVTEQSKSALAEVDRLLAAAGSDKS 68

Query: 61  KLLSATIYITDMKTFAEMNAVWDGWVSEGNTPARATVEAKLAAPQYNVEIMVVAA 115
           K+L   IY++DM TF EMNAVW+GW+   N PARAT EA LA P Y VE +V AA
Sbjct: 69  KILQTIIYLSDMSTFGEMNAVWEGWIDPANPPARATSEAALATPDYKVEFIVTAA 123


>XF1711 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Xfa Xylella fastidiosa 9a5c
          Length = 117

 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 60/113 (53%), Positives = 77/113 (68%), Gaps = 1/113 (0%)

Query: 3   IQRFETGPRMSQAVVHGNTVYLAGVVAGKAAGGSVTDQTKDILTIIDGHLAKAGTDKSKL 62
           +QRFETG RMS+  V+    YLAG V+  A+ G +  QT+ +L  ID  LA A +DKSK+
Sbjct: 5   LQRFETGVRMSEMTVYRGVCYLAGQVSEDASVG-IRGQTEQVLAEIDRLLALAASDKSKI 63

Query: 63  LSATIYITDMKTFAEMNAVWDGWVSEGNTPARATVEAKLAAPQYNVEIMVVAA 115
           L A I++ D+  F+ MN VWD WV +G TPAR TV+AKLA P + VEIMV AA
Sbjct: 64  LRAEIFLADINDFSGMNEVWDAWVPQGFTPARMTVQAKLADPAWKVEIMVTAA 116