BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0203.0024.p (312 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc00783 [O] COG0501 Zn-dependent protease with chaperone functi... 80 7e-15 DR0190 [O] COG0501 Zn-dependent protease with chaperone function... 76 9e-14 RSc0644 [O] COG0501 Zn-dependent protease with chaperone functio... 76 9e-14 YPO0398 [O] COG0501 Zn-dependent protease with chaperone functio... 72 2e-12 AGc347 [O] COG0501 Zn-dependent protease with chaperone function... 70 5e-12 >SMc00783 [O] COG0501 Zn-dependent protease with chaperone function Sme Sinorhizobium meliloti Length = 350 Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 5/114 (4%) Query: 201 PNAFALPGGKVYLFDGLLEKA-ENPDEIAGVLAHELGHLRHRDSMRELIHNGGTSFLIGL 259 PNAFALP G + L D L+E A E+ + I GVLAHE+GH+ H+ S+R++ G + L+ L Sbjct: 199 PNAFALPDGTLILTDELVELAGEDTEMILGVLAHEIGHVAHKHSLRQIYRAAGITALLML 258 Query: 260 LFGDVTGSGA--LIFASRSLVTSSFSRDAETNADSFAIETMHKLG-RPARQSRW 310 + GD+ GSGA ++ L+ S+SR AE AD ++E M K G PA +R+ Sbjct: 259 VAGDI-GSGAEDMLVQGGGLLALSYSRSAEAEADRHSVELMMKAGFDPAAIARF 311 >DR0190 [O] COG0501 Zn-dependent protease with chaperone function Dra Deinococcus radiodurans Length = 402 Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 88/320 (27%), Positives = 136/320 (42%), Gaps = 53/320 (16%) Query: 18 AVFFDGASNRRRIVALRLSDALEIREDGALLA---------------RWAFHDIRRADSP 62 V+FDG S+R R LR+ + ++ GA LA +W ++ Sbjct: 25 GVYFDGRSSRDRAATLRVLGSGDL-SSGAPLAVLRVAPTDGEPGSEQQWPLRQVQFDPPL 83 Query: 63 SGLLRLSCLTAPPLARLDIRDTGLIAALIARCDTLEEGLPNRRGVAAIVGWSLAAAVSIV 122 +G+ R+ L P R + D I AL A GL R + + G +L A V++ Sbjct: 84 AGVRRVVKL--PDGGRFETNDDRAITALEAAVGR-NRGLRGVRRLESDWGLTLGAVVTLG 140 Query: 123 LVVL----FGVPLAAERLTPLVPDSFERRIGDVAEAQVKVL----FDGKPCSNPAGQAAF 174 L V +G+P A P S + + ++VL F G + A QA Sbjct: 141 LFVWGFLTYGLPAMARSAAAATPRSV---LTSFDTSAIEVLDNGTFMGPTHLSAARQAQL 197 Query: 175 AKLVGKLRQSAG-------------------FDTSVQSGVLATSVPNAFALPGGKVYLFD 215 + + Q AG D+ SG + T NAFALPGG V + + Sbjct: 198 QREFKDVAQWAGGGYPYRLLLRDGTPQANGDKDSPAPSGSIGT---NAFALPGGTVVMTE 254 Query: 216 GLLEKAENPDEIAGVLAHELGHLRHRDSMRELIHNGGTSFLIGLLFGDVTGSGALIFASR 275 L++ A + E+ GVLAHE GH+ HR S+ + G + L + GD+ G+ A Sbjct: 255 QLVKLAHSDRELMGVLAHETGHVTHRHSLSSIYQGLGLTLLTTAVTGDLIGASTFAAAVP 314 Query: 276 S-LVTSSFSRDAETNADSFA 294 + L+ + +SR +ET +D A Sbjct: 315 TWLLKNGYSRQSETQSDEVA 334 >RSc0644 [O] COG0501 Zn-dependent protease with chaperone function Rso Ralstonia solanacearum Length = 358 Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 17/184 (9%) Query: 127 FGVPLAAERLTPLVPDSFERRIGDVAEAQVKVLFDG---KPCSNPAGQAA-----FAKLV 178 +G+P A+ L +VP E ++G + A FD +P P Q A FA L Sbjct: 117 YGLPWGAKVLAGMVPQRVEAQLGHASLAA----FDQHWLEPSKLPQAQQARIRARFAALR 172 Query: 179 GKLRQSAGFDTSVQSGVLATSVPNAFALPGGKVYLFDGLLEKAENPDEIAGVLAHELGHL 238 A +G L NAFALPGG + + D L+ D + GVLAHE GH+ Sbjct: 173 APDATHAYTIAFRDAGKLGA---NAFALPGGDIIVTDALVRLVGEGDGLMGVLAHEAGHV 229 Query: 239 RHRDSMRELIHNGGTSFLIGLLFGDVTGSGALIFASRSLVTSSFSRDAETNADSFAIETM 298 +R +R+LI + LLFGD+ S L +++T +SRD E +AD +A + Sbjct: 230 EYRHGLRQLIQSSAIGATAALLFGDI--STILAGVPATMLTLRYSRDYERDADRYASRML 287 Query: 299 HKLG 302 G Sbjct: 288 QSNG 291 >YPO0398 [O] COG0501 Zn-dependent protease with chaperone function Ype Yersinia pestis Length = 348 Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 10/186 (5%) Query: 125 VLFGVPLAAERLTPLVPDSFERRIGDVAEAQVKVLFDG--KPCSNPAG-QAAFAKLVGKL 181 + + +P A+ + +P + E+++G E ++ L KP + PA Q A +L ++ Sbjct: 112 IYWLLPWASSEIALRIPTTAEQKLG---EHSLEWLQQSGFKPSALPAERQEAIQQLFLQV 168 Query: 182 RQSAGFDTSVQSGVLATSVP---NAFALPGGKVYLFDGLLEKAENPDEIAGVLAHELGHL 238 ++ + P NAF LP G + + D L++ + D +A V+ HE+GH Sbjct: 169 MPPQMRQERTPLKLVLMTAPTTANAFMLPDGTMVISDDLIKLTTSDDALAAVMLHEMGHH 228 Query: 239 RHRDSMRELIHNGGTSFLIGLLFGDVTGSGALIFASRSLVTS-SFSRDAETNADSFAIET 297 HR SM+ ++ + + + GDV G G + S + + FSR E+ ADS+AI Sbjct: 229 AHRHSMQMVVRSSLVALTFMWMTGDVNGIGDTLLQSAAFIHEMQFSRTIESEADSWAIAE 288 Query: 298 MHKLGR 303 M + R Sbjct: 289 MQREKR 294 >AGc347 [O] COG0501 Zn-dependent protease with chaperone function Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 371 Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 2/102 (1%) Query: 201 PNAFALPGGKVYLFDGLLEKAENPDE-IAGVLAHELGHLRHRDSMRELIHNGGTSFLIGL 259 PNAFALP G + L D L+E A + I GVLAHE+GH+ + S+R+L G + L+ L Sbjct: 215 PNAFALPDGTLVLTDELVELAGGDRQMIIGVLAHEIGHVEYEHSLRQLYRAAGVAGLVML 274 Query: 260 LFGDVTGSGALIFAS-RSLVTSSFSRDAETNADSFAIETMHK 300 + GDV + I L+ S SRDAE AD ++E M K Sbjct: 275 IAGDVGSAMEDILTQGGGLLALSHSRDAERQADQRSVELMRK 316