BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0190.p (503 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XF2207 [E] COG0531 Amino acid transporters Xfa Xylella fastidios... 481 e-135 CC1184 [E] COG0531 Amino acid transporters Ccr Caulobacter vibri... 405 e-112 RSc1588 [E] COG0531 Amino acid transporters Rso Ralstonia solana... 403 e-112 XF2208 [E] COG0531 Amino acid transporters Xfa Xylella fastidios... 401 e-111 BS_yfnA [E] COG0531 Amino acid transporters Bsu Bacillus subtilis 382 e-105 >XF2207 [E] COG0531 Amino acid transporters Xfa Xylella fastidiosa 9a5c Length = 483 Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust. Identities = 250/473 (52%), Positives = 324/473 (68%), Gaps = 11/473 (2%) Query: 26 GDAETPVFRRSLSALQLVTLGIGGIIGAGIFVLTGHAAAANAGPAVTLSFMLGAVACAFA 85 G ET + +RSL+A QLV LGIG +IGAGIFVL+GHAAA AGPAV LS++L +ACA A Sbjct: 21 GKGETQL-KRSLTAGQLVMLGIGAVIGAGIFVLSGHAAAEYAGPAVVLSYILAGIACALA 79 Query: 86 GLCYAEMSSTVPICGSAYTYAYATLGELIAWIIGWDLILEYAVGAIAVSVGWSGYFVSLM 145 GLCYAE ++ +P+ GSAY+YAYATLGE AW IGW+L+LEY A V+VGWSGY S + Sbjct: 80 GLCYAEFAAMLPVSGSAYSYAYATLGEFTAWFIGWNLVLEYMFSASTVAVGWSGYLNSFL 139 Query: 146 RDFGINLPQQFTSAPLAYDVNTGVWSSTGAVINIPAMAIIAFVTTLLVVGIRESARFTSF 205 FG LP +SAPL DV G +G +IN+PA+AI+A ++ L VGI +SA S Sbjct: 140 SSFGYGLPASLSSAPL--DVVDGRLIYSGGLINLPAVAIVAAISGLCYVGITQSAFVNSI 197 Query: 206 VVVVKLVVIALFLATAASSVTLANWVTASNPEGALIPPNAGPGVFGWSGVVRGAAVVFFA 265 V +K+ VI LF+A AA V NWV +P NA PG +G GV+RGAAVVFF+ Sbjct: 198 TVAIKVSVIVLFIAFAARYVNPDNWV-------PFVPDNAAPGKYGMEGVIRGAAVVFFS 250 Query: 266 YIGFDAISTAAQEAKTPERDMPIGILGSLVICAALYVAVGFVLTGIVPYDRLGVPDPIAV 325 YIGFDA+ST A EAK P+RDMPIGILGSL IC +Y+A VLTG++ Y +L P P+A Sbjct: 251 YIGFDAVSTTAGEAKNPQRDMPIGILGSLAICTVIYIAFSGVLTGLMHYSQLDTPKPVAT 310 Query: 326 GIDAV-GIGWLGPFIKLGILFGLTSVILIMLLAQPRIFRAMAHDGLLPGFAAKIHPRFQT 384 ++ + WL +++G + GL+S +L+ML+AQPRIF AM+ DGLLP +K+HP+FQT Sbjct: 311 ALETYPTLSWLKHVVEIGAIAGLSSTMLMMLMAQPRIFYAMSQDGLLPKLLSKVHPKFQT 370 Query: 385 PYVSTIFAGTVAALLGGLLPIGLVGELVSIGTLFAFTVVSIGTLVLRVRDPELPRPFKAP 444 P+V T+ G A L GL PI L+G+LVS+GTL AF V IG +VLR P+LPRPF+ P Sbjct: 371 PHVGTLLVGACACTLAGLFPISLLGDLVSMGTLLAFATVCIGIVVLRRTRPDLPRPFRVP 430 Query: 445 AIWLVAPAAAATSLFLMFGLPLDTWIRLAVWLMIGLVIYAAYGRRHSRLRASG 497 W++APA AA L+L + + W + W ++GLV+Y YG HS+LR G Sbjct: 431 MYWVIAPAGAAACLYLFWQPFTEHWPLMVGWTVLGLVMYGLYGYHHSKLRRGG 483 >CC1184 [E] COG0531 Amino acid transporters Ccr Caulobacter vibrioides Length = 546 Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust. Identities = 245/528 (46%), Positives = 327/528 (61%), Gaps = 55/528 (10%) Query: 11 RKSTSDLLREAARADGDAETPVFRRSLSALQLVTLGIGGIIGAGIFVLTGHAAAANAGPA 70 +KS + + +EAA + +R+L + L++LG+G IIGAGIFVLTG A+ANAGPA Sbjct: 24 KKSIASIQKEAAHSQ-------LKRTLGPINLMSLGVGAIIGAGIFVLTGQVASANAGPA 76 Query: 71 VTLSFMLGAVACAFAGLCYAEMSSTVPICGSAYTYAYATLGELIAWIIGWDLILEYAVGA 130 + LSF++ +ACA AGLCYAE++ST+P+ GSAYTYAY TLGE+ AWI+GW L+LEY V A Sbjct: 77 IMLSFIVAGIACALAGLCYAELASTMPVSGSAYTYAYGTLGEVFAWIMGWLLVLEYGVAA 136 Query: 131 IAVSVGWSGYFVSLMRDFGINLPQ-QFTSA-------PLAYDVNT---GVWSSTGAVINI 179 V+VGWSGY VS + GIN P Q A PL V G + +N+ Sbjct: 137 STVAVGWSGYVVSTLHALGINFPMIQVAGADAPMWATPLIQAVAAPGGGTMFAMTGTLNL 196 Query: 180 PAMAIIAFVTTLLVVGIRESARFTSFVVVVKLVVIALFLATAASSVTLANWVTASNPEGA 239 A IA V+ LLVVG+ ESA + +VV+K++V+ F+A A + ANW +P Sbjct: 197 VAAIGIAMVSALLVVGVSESANVNNAIVVIKVIVLVTFIAVGAQYINPANW----HP--- 249 Query: 240 LIP-PNAGPGVFGWSGVVRGAAVVFFAYIGFDAISTAAQEAKTPERDMPIGILGSLVICA 298 IP P PG FG G+ RGAA++FFAY+GF+A+STAA EAK P RD+PIGILG+L+IC Sbjct: 250 FIPEPTGQPGEFGIGGIFRGAAIIFFAYVGFEAVSTAAAEAKNPSRDVPIGILGALIICT 309 Query: 299 ALYVAVGFVLTGIVPYDRLGVPDPIAVGIDAVGIGWLG-PF--------------IKLGI 343 +Y+AV V+TG+VP+ L P PIAV ID +G+ W P+ IK+G Sbjct: 310 LIYMAVAAVMTGVVPFRELASPAPIAVAIDRMGLEWADIPYAAAEGGKLNLLSFAIKIGA 369 Query: 344 LFGLTSVILIMLLAQPRIFRAMAHDGLLPGFAAKIHPRFQTPYVSTIFAGTVAALLGGLL 403 + GL+SV+L++ Q RIF MA DGLLP A+IHP+F+TP++ TI G V A+ L Sbjct: 370 ITGLSSVMLVLCYGQTRIFYTMARDGLLPKVFAEIHPKFRTPWLGTILLGVVIAIAASFL 429 Query: 404 PIGLVGELVSIGTLFAFTVVSIGTLVLRVRDPELPRPFKAPAIWLVAPAAAATSLFL--- 460 PI L+G+LVS+GT AF++V + + LR++ P+LPRPFK P A A A LFL Sbjct: 430 PISLLGDLVSLGTAVAFSIVCLSVIYLRIKHPDLPRPFKVPGGIFTAAAGIAACLFLPYQ 489 Query: 461 ---------MFGLPLDTWIRLAVWLMIGLVIYAAYGRRHSRLRASGGD 499 M PL I L + +G +IY AYG HS+L A G D Sbjct: 490 NFQPMIVHAMNDNPLPLMI-LGGYAAVGAIIYIAYGYWHSKL-AKGID 535 >RSc1588 [E] COG0531 Amino acid transporters Rso Ralstonia solanacearum Length = 476 Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust. Identities = 225/483 (46%), Positives = 307/483 (63%), Gaps = 26/483 (5%) Query: 14 TSDLLREAARADGDAETPVFRRSLSALQLVTLGIGGIIGAGIFVLTGHAAAANAGPAVTL 73 T +L GD ++ L L LG+G IIG GIFVLTG A AGPA+TL Sbjct: 6 TKNLDHMIRTGQGDTG---LKKVFGPLDLTFLGVGAIIGTGIFVLTG-TGALTAGPALTL 61 Query: 74 SFMLGAVACAFAGLCYAEMSSTVPICGSAYTYAYATLGELIAWIIGWDLILEYAVGAIAV 133 SF++ A+AC FA LCYAE +ST+P+ GS YTYAYATLGEL+AWIIGWDL+LEY + AV Sbjct: 62 SFVVAALACGFAALCYAEFASTIPVSGSIYTYAYATLGELVAWIIGWDLMLEYGLATSAV 121 Query: 134 SVGWSGYFVSLMRDFGINLPQQFTSAPLAYDVNTGVWSSTGAVINIPAMAIIAFVTTLLV 193 SVGWSGYF SLM FG++LP +AP G + N+PA+ I+ +T +L Sbjct: 122 SVGWSGYFQSLMAGFGLHLPAALMAAP-------GAIPGVQTLFNLPALLIMLIITAVLS 174 Query: 194 VGIRESARFTSFVVVVKLVVIALFLATAASSVTLANWVTASNPEGALIPPNAGPGVFGWS 253 +G+RESARF + +V +K+ V+ LF+ A V ANW P +P FG S Sbjct: 175 LGVRESARFNNIMVAIKVAVVVLFIVVGARHVQPANW----QP---FMP-------FGMS 220 Query: 254 GVVRGAAVVFFAYIGFDAISTAAQEAKTPERDMPIGILGSLVICAALYVAVGFVLTGIVP 313 GV AA+VFFA+IGFDA++ AA+E + PERD+PIGI+GSL +C LYV V ++TGIVP Sbjct: 221 GVFGAAALVFFAFIGFDAVTAAAEEVRNPERDLPIGIIGSLGVCTILYVVVAAIMTGIVP 280 Query: 314 YDRL-GVPDPIAVGIDAVGIGWLGPFIKLGILFGLTSVILIMLLAQPRIFRAMAHDGLLP 372 Y + GV P+++ + G W+ F+ LG + G+T+VIL+M Q R+ AM+ DGLLP Sbjct: 281 YTKFAGVDHPVSLALQMGGETWVAGFVDLGAIIGMTTVILVMGYGQTRVIFAMSRDGLLP 340 Query: 373 GFAAKIHPRFQTPYVSTIFAGTVAALLGGLLPIGLVGELVSIGTLFAFTVVSIGTLVLRV 432 +++HPR+ TP+ +T G V AL+ +P+ ++ EL++IGTL AF++++I LVLR Sbjct: 341 KRLSRVHPRYATPFFNTWLVGIVFALIAAFVPLNVLAELINIGTLAAFSLIAIAVLVLRR 400 Query: 433 RDPELPRPFKAPAIWLVAPAAAATSLFLMFGLPLDTWIRLAVWLMIGLVIYAAYGRRHSR 492 + P+LPR F+ P + V AA +FLM L TWI VW++IGL++Y Y R S Sbjct: 401 KRPDLPRGFRCPGVPFVPAAAVVLCVFLMSQLQALTWIAFVVWMVIGLLVYFGYARSRSL 460 Query: 493 LRA 495 L A Sbjct: 461 LHA 463 >XF2208 [E] COG0531 Amino acid transporters Xfa Xylella fastidiosa 9a5c Length = 477 Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust. Identities = 216/472 (45%), Positives = 299/472 (63%), Gaps = 13/472 (2%) Query: 24 ADGDAETPVFRRSLSALQLVTLGIGGIIGAGIFVLTGHAAAANAGPAVTLSFMLGAVACA 83 + AE +R L L LGIG +IG GIFV+TG AAA +AGPA+ LSF L A+ C Sbjct: 14 SQDSAEGLSLQRVLGVWGLTALGIGAVIGGGIFVITGQAAANHAGPAIMLSFALAAICCT 73 Query: 84 FAGLCYAEMSSTVPICGSAYTYAYATLGELIAWIIGWDLILEYAVGAIAVSVGWSGYFVS 143 F L YAE ++ VP+ GSAYTY YAT GEL AW IGW L+LEY V A AV+V WSGYF+S Sbjct: 74 FCALAYAEFAAMVPVSGSAYTYTYATFGELAAWFIGWMLVLEYGVSAAAVAVSWSGYFLS 133 Query: 144 LMRDFGINLPQQFTSAPLAYDVNTGVWSSTGAVINIPAMAIIAFVTTLLVVGIRESARFT 203 L++ GI+LP +APL G +TGA+ N+PA I+ +T L GIR+S++ Sbjct: 134 LLQHLGIDLPAALVNAPL-----DGTLHATGAIANLPAATIVLLLTWLCYFGIRKSSKIN 188 Query: 204 SFVVVVKLVVIALFLATAASSVTLANWVTASNPEGALIPPNAGPGVFGWSGVVRGAAVVF 263 +V +K +I L + V W P IPPN GPG +GW GV+ GA++VF Sbjct: 189 IAMVALKSGLILLIIGVGWKYVNPDYW----QP---FIPPNQGPGKYGWDGVLHGASMVF 241 Query: 264 FAYIGFDAISTAAQEAKTPERDMPIGILGSLVICAALYVAVGFVLTGIVPYDRLGVPDPI 323 FAYIGF+A+S AAQE+ P+RD+PI ++ +L IC LY+ + V+TG+VPY +LG +P+ Sbjct: 242 FAYIGFEAVSVAAQESHRPQRDLPISMMSALAICTVLYIMMAAVMTGLVPYTQLGTDEPV 301 Query: 324 AVGIDAV-GIGWLGPFIKLGILFGLTSVILIMLLAQPRIFRAMAHDGLLPGFAAKIHPRF 382 + A +GWL +++G L GL+SV+L+ML+ QPRIF MA DGLLP + IH + Sbjct: 302 VTAVAAHPQLGWLRVVVEIGALVGLSSVVLVMLIGQPRIFMIMAGDGLLPPIFSTIHSKH 361 Query: 383 QTPYVSTIFAGTVAALLGGLLPIGLVGELVSIGTLFAFTVVSIGTLVLRVRDPELPRPFK 442 +TP+++T+ G ALL + P+ ++GEL S+GTL AF V G L+LR P+LPRPF+ Sbjct: 362 RTPHINTVITGLGIALLAAVFPLDVLGELTSMGTLIAFAAVCAGVLILRCTRPDLPRPFR 421 Query: 443 APAIWLVAPAAAATSLFLMFGLPLDTWIRLAVWLMIGLVIYAAYGRRHSRLR 494 PA WL A + + L+ + W+ ++VW ++G +Y YG RHS+L Sbjct: 422 MPAAWLFCSAGVLSCITLLSAMTRHNWMLMSVWTVLGFALYFGYGYRHSKLH 473 >BS_yfnA [E] COG0531 Amino acid transporters Bsu Bacillus subtilis Length = 461 Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/482 (42%), Positives = 300/482 (62%), Gaps = 25/482 (5%) Query: 15 SDLLREA--ARADGDAETPVFRRSLSALQLVTLGIGGIIGAGIFVLTGHAAAANAGPAVT 72 S L R+ +++ R+LSA L LGIG +IG GIFV+TG AA AGPA+ Sbjct: 2 SSLFRKKPLETLSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPALI 61 Query: 73 LSFMLGAVACAFAGLCYAEMSSTVPICGSAYTYAYATLGELIAWIIGWDLILEYAVGAIA 132 +SF+L +ACA A CYAE SS++PI GS Y+Y+Y TLGEL+A++IGWDL+LEY + A Sbjct: 62 ISFILAGLACALAAFCYAEFSSSIPISGSVYSYSYVTLGELLAFLIGWDLMLEYVIALSA 121 Query: 133 VSVGWSGYFVSLMRDFGINLPQQFTSAPLAYDVNTGVWSSTGAVINIPAMAIIAFVTTLL 192 V+ GWS YF SL+ F +++P T AP S GAV N+PA II +T ++ Sbjct: 122 VATGWSSYFQSLLAGFNLHIPAALTGAP---------GSMAGAVFNLPAAVIILLITAIV 172 Query: 193 VVGIRESARFTSFVVVVKLVVIALFLATAASSVTLANWVTASNPEGALIPPNAGPGVFGW 252 G++ES RF + +V++K+ +I LF+ V NW +P FG Sbjct: 173 SRGVKESTRFNNVIVLMKIAIILLFIIVGIGYVKPDNW-------SPFMP-------FGM 218 Query: 253 SGVVRGAAVVFFAYIGFDAISTAAQEAKTPERDMPIGILGSLVICAALYVAVGFVLTGIV 312 GV+ AA VFFAY+GFDA+S A++E K P+++MP+GI+ +L +C LY+AV VLTG++ Sbjct: 219 KGVILSAATVFFAYLGFDAVSNASEEVKNPQKNMPVGIISALAVCTVLYIAVSLVLTGMM 278 Query: 313 PYDRLGVPDPIAVGIDAVGIGWLGPFIKLGILFGLTSVILIMLLAQPRIFRAMAHDGLLP 372 PY +L V DP++ + VG + I +G + G+T+V+L +L AQ R+ AM+ DGLLP Sbjct: 279 PYAKLNVGDPVSFALKFVGQDAVAGIISVGAIIGITTVMLALLYAQVRLTFAMSRDGLLP 338 Query: 373 GFAAKIHPRFQTPYVSTIFAGTVAALLGGLLPIGLVGELVSIGTLFAFTVVSIGTLVLRV 432 G AK+HP F+TP+ +T G VAA + G + +G + LV++GTL AFTV+SI +VLR Sbjct: 339 GLFAKVHPSFKTPFRNTWLTGIVAAGIAGFINLGTLAHLVNMGTLAAFTVISIAVIVLRK 398 Query: 433 RDPELPRPFKAPAIWLVAPAAAATSLFLMFGLPLDTWIRLAVWLMIGLVIYAAYGRRHSR 492 + PE+ F+ P + +V +A L+ M+ LP TW+ +W+ +G ++Y Y R+HS Sbjct: 399 KHPEIKASFRVPFVPVVPIISAGICLWFMYSLPGVTWLSFVIWIAVGTLVYFLYSRKHSL 458 Query: 493 LR 494 L Sbjct: 459 LN 460