BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0180.p         (170 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BS_sapB [S] COG1285 Uncharacterized membrane protein Bsu Bacillu...    76   3e-14
all3396 [S] COG1285 Uncharacterized membrane protein Nos Nostoc ...    73   2e-13
PA4635 [S] COG1285 Uncharacterized membrane protein Pae Pseudomo...    72   5e-13
lin2751 [S] COG1285 Uncharacterized membrane protein Lin Listeri...    72   6e-13
AGpAbx97 [S] COG1285 Uncharacterized membrane protein Atu Agroba...    72   6e-13

>BS_sapB [S] COG1285 Uncharacterized membrane protein Bsu Bacillus subtilis
          Length = 232

 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 77/115 (66%), Gaps = 5/115 (4%)

Query: 6   EIILRLGAATLAGCAIGLDRDLHGKPIGLKTLGLVSLSTAMVVLLALQAVE--PGKFTDA 63
           +I+L+LG ATL G  IGL+R+L  KP+GLKT  ++++S+ M+ ++++ A    P  +   
Sbjct: 10  DILLKLGIATLIGMVIGLERELKNKPLGLKTCIVIAVSSCMLTIVSINAAYHFPKYYRIM 69

Query: 64  VS--RVIQGVLTGIGFLGAGVIVRQGDRFQVRGLTSAACAFFAACVGIVCGAGHW 116
           +   R+   +++G+GF+GAGVI+R+ +   + GLT++A  + AA +G+  GAG +
Sbjct: 70  MDPLRLPAQIISGVGFIGAGVILRKSNDV-ISGLTTSAMIWGAAGLGLATGAGFY 123


>all3396 [S] COG1285 Uncharacterized membrane protein Nos Nostoc sp. PCC
           7120
          Length = 106

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 4/104 (3%)

Query: 39  LVSLSTAMVVLLALQAVEPGKFTDAVSRVIQGVLTGIGFLGAGVIVR----QGDRFQVRG 94
           LVS  +A+ V++ LQ +      + VSRVIQG+  G+GFLGAG IVR    Q  R ++ G
Sbjct: 2   LVSFGSAIFVVIPLQIISIQSHPEVVSRVIQGIAAGVGFLGAGEIVRESSQQSQRLEIHG 61

Query: 95  LTSAACAFFAACVGIVCGAGHWPIVVTAVALAFLLLTFGKRTER 138
           LTSAA  + ++ +GI  G G W + +    + F +L   KR E 
Sbjct: 62  LTSAAAIWVSSGLGIAAGCGLWQLSLVGAIITFAVLNIFKRLEN 105


>PA4635 [S] COG1285 Uncharacterized membrane protein Pae Pseudomonas
           aeruginosa
          Length = 234

 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 65/112 (58%), Gaps = 5/112 (4%)

Query: 3   DWSEIILRLGAATLAGCAIGLDRDLHGKPIGLKTLGLVSLSTAMVVLLALQAVEPGKFTD 62
           DW   +LR+  A + G  IG +R L  +  GL+T  LVS    + VL+  Q V PG   D
Sbjct: 2   DWKVFLLRVAVALVLGALIGAERQLRQRLTGLRTNALVSTGACLFVLMT-QGV-PGLAGD 59

Query: 63  AVSRVIQGVLTGIGFLGAGVIVRQGDRFQVRGLTSAACAFFAACVGIVCGAG 114
           A SR+   V++GIGFLG GVI+R G    VRGL +AA  +  A +G++C  G
Sbjct: 60  A-SRIAAYVVSGIGFLGGGVIMRDG--LNVRGLNTAATLWCTAAIGVLCSMG 108


>lin2751 [S] COG1285 Uncharacterized membrane protein Lin Listeria innocua
          Length = 220

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 14/141 (9%)

Query: 1   LADWSEIILRLGAATLAGCAIGLDRDLHGKPIGLKTLGLVSLSTAMVVLLALQAVEPGKF 60
           LAD+   ILRL  A L G  IGLDR++  K  G +T  LVSL +A++++++         
Sbjct: 2   LADF---ILRLVVAGLLGAVIGLDREIRAKEAGFRTHFLVSLGSALIMIVSQYGFSEIAT 58

Query: 61  TDAV----SRVIQGVLTGIGFLGAGVIVRQGDRFQVRGLTSAACAFFAACVGIVCGAG-H 115
              V    SRV   V++GIGF+GAG I+ Q  +F VRGLT+AA  +  A +G+  GAG +
Sbjct: 59  MQTVSFDPSRVAAQVVSGIGFIGAGTIIIQ-KKF-VRGLTTAAGLWATAGIGLAVGAGMY 116

Query: 116 W----PIVVTAVALAFLLLTF 132
           W      ++T + L FL + F
Sbjct: 117 WVGIAATLLTLIGLEFLSIVF 137


>AGpAbx97 [S] COG1285 Uncharacterized membrane protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 194

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 3/126 (2%)

Query: 5   SEIILRLGAATLAGCAIGLDRDLHGKPIGLKTLGLVSLSTAMVVLLALQAVEPGKFTDAV 64
           + I +RL  A + G  +G +R+  G+  GL+T  LV++  A+ VL  LQ+   G     +
Sbjct: 51  TRITVRLVIAAVLGGVLGFERESKGRSAGLRTHMLVAVGAALFVLGPLQS---GMQIGDL 107

Query: 65  SRVIQGVLTGIGFLGAGVIVRQGDRFQVRGLTSAACAFFAACVGIVCGAGHWPIVVTAVA 124
           SRV+QGV+ GIGFLGAG I+ +  + +V GLT+AA  +  A +G++ G G     V + A
Sbjct: 108 SRVLQGVVQGIGFLGAGAIIIRSAQREVEGLTTAASIWATAAIGVMAGLGMEVTAVLSTA 167

Query: 125 LAFLLL 130
           +  ++L
Sbjct: 168 IVLVIL 173