BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0120.p         (131 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC0593 [NT] COG0840 Methyl-accepting chemotaxis protein Ccr Caul...   123   8e-29

>CC0593 [NT] COG0840 Methyl-accepting chemotaxis protein Ccr Caulobacter
           vibrioides
          Length = 599

 Score =  123 bits (309), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 73/131 (55%), Positives = 90/131 (68%)

Query: 1   VASEVKALAEQTAKATGEIGQQIAGIQTATQESVGAIKEISSTIERLSEISSTIAAAVEE 60
           VA+EVK LA QTAKAT +I  QI  IQ  T +SV AI EI   I+ ++ +S+ I AAVEE
Sbjct: 469 VAAEVKGLATQTAKATEDIAAQIHEIQNITSDSVSAISEIQRIIDEMNAVSTAINAAVEE 528

Query: 61  QGAATQEISRNVQQAAQGTQQVSANITDVQHGANETGSASSQVLSAAQSLSGDSNRLKLE 120
           Q AAT+EI+RN  +AA G Q VS NI+DV HGA +TGSAS QV+SA+Q L   +  L+  
Sbjct: 529 QSAATREIARNTSEAANGAQDVSRNISDVLHGAQQTGSASHQVVSASQELGRQAAALRDR 588

Query: 121 VGKFLDAVRAA 131
           V  FL  VRAA
Sbjct: 589 VDTFLKTVRAA 599