BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0081.p         (213 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

yfdW [C] COG1804 Predicted acyl-CoA transferases/carnitine dehyd...   231   6e-61
Z3639 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehy...   231   7e-61
ECs3254 [C] COG1804 Predicted acyl-CoA transferases/carnitine de...   231   7e-61
yfdE [C] COG1804 Predicted acyl-CoA transferases/carnitine dehyd...   141   1e-33
ZyfdEm [C] COG1804 Predicted acyl-CoA transferases/carnitine deh...   139   7e-33

>yfdW [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase
           Eco Escherichia coli K12
          Length = 416

 Score =  231 bits (590), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 104/155 (67%), Positives = 127/155 (81%), Gaps = 1/155 (0%)

Query: 1   MTKALKGVRILDFTHVQSGPTCTQLLAWFGADVIKVERPGVGDITRGQLQDIPNVDSLYF 60
           M+  L+G+++LDFT VQSGP+CTQ+LAWFGADVIK+ERPGVGD+TR QL+DIP++D+LYF
Sbjct: 1   MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYF 60

Query: 61  TMLNHNKRSITLDTKNPKGKEVLTALIKQCDVLVENFGPGVLDRMGFPWEKIQAINPKMI 120
           TMLN NKRSI L+TK  +GKEV+  LI++ D+LVENF PG +D MGF WE IQ INP++I
Sbjct: 61  TMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLI 120

Query: 121 VASIKGFGP-GPYEDCKVYENVAQCTGGAASTTGF 154
             SIKGF    PY + K YENVAQ  GGAASTTGF
Sbjct: 121 FGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGF 155


>Z3639 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase
           EcZ Escherichia coli O157:H7 EDL933
          Length = 416

 Score =  231 bits (590), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 104/155 (67%), Positives = 127/155 (81%), Gaps = 1/155 (0%)

Query: 1   MTKALKGVRILDFTHVQSGPTCTQLLAWFGADVIKVERPGVGDITRGQLQDIPNVDSLYF 60
           M+  L+G+++LDFT VQSGP+CTQ+LAWFGADVIK+ERPGVGD+TR QL+DIP++D+LYF
Sbjct: 1   MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYF 60

Query: 61  TMLNHNKRSITLDTKNPKGKEVLTALIKQCDVLVENFGPGVLDRMGFPWEKIQAINPKMI 120
           TMLN NKRSI L+TK  +GKEV+  LI++ D+LVENF PG +D MGF WE IQ INP++I
Sbjct: 61  TMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLI 120

Query: 121 VASIKGFGP-GPYEDCKVYENVAQCTGGAASTTGF 154
             SIKGF    PY + K YENVAQ  GGAASTTGF
Sbjct: 121 FGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGF 155


>ECs3254 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase
           Ecs Escherichia coli O157:H7
          Length = 416

 Score =  231 bits (590), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 104/155 (67%), Positives = 127/155 (81%), Gaps = 1/155 (0%)

Query: 1   MTKALKGVRILDFTHVQSGPTCTQLLAWFGADVIKVERPGVGDITRGQLQDIPNVDSLYF 60
           M+  L+G+++LDFT VQSGP+CTQ+LAWFGADVIK+ERPGVGD+TR QL+DIP++D+LYF
Sbjct: 1   MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYF 60

Query: 61  TMLNHNKRSITLDTKNPKGKEVLTALIKQCDVLVENFGPGVLDRMGFPWEKIQAINPKMI 120
           TMLN NKRSI L+TK  +GKEV+  LI++ D+LVENF PG +D MGF WE IQ INP++I
Sbjct: 61  TMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLI 120

Query: 121 VASIKGFGP-GPYEDCKVYENVAQCTGGAASTTGF 154
             SIKGF    PY + K YENVAQ  GGAASTTGF
Sbjct: 121 FGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGF 155


>yfdE [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase
           Eco Escherichia coli K12
          Length = 394

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 94/153 (61%), Gaps = 6/153 (3%)

Query: 5   LKGVRILDFTHVQSGPTCTQLLAWFGADVIKVERPGVGDITRGQLQDIPNVD--SLYFTM 62
            +G+ ++D THV +GP  TQLL   GA VIKVE PG GD TR      P VD  SLY++ 
Sbjct: 23  FEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTR---TFGPYVDGQSLYYSF 79

Query: 63  LNHNKRSITLDTKNPKGKEVLTALIKQCDVLVENFGPGVLDRMGFPWEKIQAINPKMIVA 122
           +NH K S+ LD KN   K +   ++KQ DVL ENF PG ++++GF WE +Q INP++I A
Sbjct: 80  INHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYA 139

Query: 123 SIKGFGP-GPYEDCKVYENVAQCTGGAASTTGF 154
           S  GFG  GP +D   Y+ + Q   G    TG+
Sbjct: 140 SSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGY 172


>ZyfdEm [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase
           EcZ Escherichia coli O157:H7 EDL933
          Length = 394

 Score =  139 bits (349), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 94/153 (61%), Gaps = 6/153 (3%)

Query: 5   LKGVRILDFTHVQSGPTCTQLLAWFGADVIKVERPGVGDITRGQLQDIPNVD--SLYFTM 62
            +G+ ++D THV +GP  TQLL   GA VIKVE PG GD TR      P VD  +LY++ 
Sbjct: 23  FEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTR---TFGPYVDGWTLYYSF 79

Query: 63  LNHNKRSITLDTKNPKGKEVLTALIKQCDVLVENFGPGVLDRMGFPWEKIQAINPKMIVA 122
           +NH K S+ LD KN   K +   ++KQ DVL ENF PG ++++G  WE++Q INP++I A
Sbjct: 80  INHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGLSWERLQEINPRLIYA 139

Query: 123 SIKGFGP-GPYEDCKVYENVAQCTGGAASTTGF 154
           S  GFG  GP +D   Y+ + Q   G    TG+
Sbjct: 140 SSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGY 172