BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0061.p         (278 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC3489 [V] COG1680 Beta-lactamase class C and other penicillin b...    77   4e-14

>CC3489 [V] COG1680 Beta-lactamase class C and other penicillin binding
           proteins Ccr Caulobacter vibrioides
          Length = 575

 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 2/98 (2%)

Query: 65  QSPPGAVRQEIAVATAVLDRYAGFYQLSEQAVLGVMREDHHLAVQLTGQRAVAFFAESQT 124
           ++PP   R  + +A A  D+  G Y ++  AV+ + R+   +  QLTGQ  V  FAES T
Sbjct: 375 KTPP-KTRVAVPLAPAAFDKLVGRYAMAPGAVMTIRRDGERMLGQLTGQPTVELFAESPT 433

Query: 125 EFFAREVDAQISFVIAADGQATSLILHQNG-DKPMPRI 161
            FF + VDAQ++F + A+G+ T++ LHQNG +   PR+
Sbjct: 434 TFFLKVVDAQLTFAVDAEGRGTAVTLHQNGQNTTAPRL 471



 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 59/122 (48%), Gaps = 10/122 (8%)

Query: 40  QRDWNTLAARIQAAGGSADVPASAQQSPPGAVRQEIAVATAVLDRYAGFYQLSEQAVLGV 99
           Q   NT A R+      A+VPA     PP   +   A++ A LD   G Y L+   V+ V
Sbjct: 461 QNGQNTTAPRLAEG---AEVPA-----PPRPAKVA-ALSVAELDALTGRYALAPGFVVTV 511

Query: 100 MREDHHLAVQLTGQRAVAFFAESQTEFFAREVDAQISFVIAADGQATSLILHQNG-DKPM 158
            R+   L  QLTGQ     F ES T  F   V A  SF +  DG+A SL LHQ G D P 
Sbjct: 512 TRKGQSLFAQLTGQPEFEVFPESATRVFWTVVPAAASFTLGPDGKAVSLTLHQGGRDMPA 571

Query: 159 PR 160
           PR
Sbjct: 572 PR 573