BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0046.p (338 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr4084 Non COG 264 2e-70 AGl1145 [G] COG2814 Arabinose efflux permease Atu Agrobacterium ... 219 8e-57 PA4355 [G] COG2814 Arabinose efflux permease Pae Pseudomonas aer... 214 2e-55 SMb20071 [G] COG2814 Arabinose efflux permease Sme Sinorhizobium... 214 3e-55 mlr2770 Non COG 206 7e-53 >mlr4084 Non COG Length = 397 Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 145/218 (66%), Positives = 168/218 (77%), Gaps = 1/218 (0%) Query: 1 MPAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTL 60 MP A+ AL AGAFGIG TEF+IMGLL+ V+ D+ VS+SAAG LISGYALGV +GAP+LT+ Sbjct: 1 MPIALYALAAGAFGIGVTEFVIMGLLIDVSKDLGVSISAAGQLISGYALGVVIGAPLLTI 60 Query: 61 ATRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLV 120 AT PRK VLLALMAIFTLGN ACALAP Y LM ARI+T+ AHGTFFGVGSVVAT LV Sbjct: 61 ATGNWPRKTVLLALMAIFTLGNLACALAPDYWALMGARIITAFAHGTFFGVGSVVATGLV 120 Query: 121 PEDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVPG 180 +K+ASAIA MF GLT+A +LGVPFG W G GWRA FWAV A+G+ AF V+ LVP Sbjct: 121 APNKKASAIALMFTGLTIANILGVPFGTWLGQAFGWRATFWAVTAVGLAAFAVILALVPR 180 Query: 181 HVGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 A +K + LR +LAVL R VLLGLA TV G+ G+F Sbjct: 181 SQVAPEK-SDLRADLAVLRRTPVLLGLATTVLGYAGVF 217 >AGl1145 [G] COG2814 Arabinose efflux permease Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 431 Score = 219 bits (558), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 114/218 (52%), Positives = 158/218 (72%), Gaps = 1/218 (0%) Query: 1 MPAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTL 60 MP A+ ALT A+ IGTTEF+I+GLL VA D+ +++ AGL++S YALGV GAPILT Sbjct: 39 MPLAIFALTIAAYAIGTTEFVIVGLLPTVANDLHITLPLAGLIVSVYALGVTFGAPILTA 98 Query: 61 ATRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLV 120 T R+ RK +LL LMA+F +GN A AL+PSY +L+ AR++ + AHG FF VG+ +A LV Sbjct: 99 LTGRIERKPLLLGLMALFIVGNTAAALSPSYEMLLVARVIAAFAHGVFFSVGATIAADLV 158 Query: 121 PEDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVPG 180 PE++RASAIA MF+GLT+A + GVP G + G + GWRA FWAV A+G++AF+ +AVL+P Sbjct: 159 PENRRASAIAMMFMGLTVAIVTGVPIGTYIGQIFGWRATFWAVGALGIVAFVAIAVLLPN 218 Query: 181 HVGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 + PA + +++ VLG ++L+ AMT G+GG F Sbjct: 219 TL-KKAPPASIFDQVRVLGSGRLLIVFAMTALGYGGTF 255 >PA4355 [G] COG2814 Arabinose efflux permease Pae Pseudomonas aeruginosa Length = 388 Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 119/218 (54%), Positives = 151/218 (69%), Gaps = 2/218 (0%) Query: 1 MPAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTL 60 MPA++L L AF IGTTEF+IMGLL QVA D++VS+ +AG LISGYA V GAP++ + Sbjct: 1 MPASLLVLALSAFAIGTTEFVIMGLLPQVAGDLRVSIPSAGWLISGYAFAVAFGAPLMAM 60 Query: 61 ATRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLV 120 AT R+ RK LLALM IF +GN CA+A +YGLLM ARI+T+L HG FFG+GSVVA SLV Sbjct: 61 ATARLERKKALLALMGIFIVGNLLCAVAANYGLLMLARIVTALCHGAFFGIGSVVAASLV 120 Query: 121 PEDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVPG 180 ++RASA+A MF GLTLA +LGVP G G GWRA FW V IGV+AF+ LA ++P Sbjct: 121 APNRRASAVALMFTGLTLANVLGVPLGTALGQEAGWRATFWVVTLIGVVAFVGLARVLPN 180 Query: 181 HVGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 ++ LR+E++ L P + L L TV +F Sbjct: 181 D--REEEKVDLRQEMSALKNPSLWLALGTTVLFAASMF 216 >SMb20071 [G] COG2814 Arabinose efflux permease Sme Sinorhizobium meliloti Length = 397 Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 157/218 (72%), Gaps = 1/218 (0%) Query: 1 MPAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTL 60 MP A+ ALT A+ IGTTEF+I+GLL VA D+ +++ AGL++S YALGV GAP+LT Sbjct: 1 MPLAIFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLTA 60 Query: 61 ATRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLV 120 T R+ RK +LL LMA+F GN A AL+P+Y +L+ AR+L++ AHG FF VGS +A LV Sbjct: 61 LTGRIERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADLV 120 Query: 121 PEDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVPG 180 PE++RASAIA MF+GLT+A + GVP G + G + GWRA FW V+ +GV+AF +A L+PG Sbjct: 121 PENRRASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLPG 180 Query: 181 HVGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 + A PA L +++ VLG ++L+ AMT G+GG F Sbjct: 181 TL-AKAAPASLLDQVRVLGSGRLLIVFAMTALGYGGTF 217 >mlr2770 Non COG Length = 391 Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 120/218 (55%), Positives = 149/218 (68%), Gaps = 1/218 (0%) Query: 1 MPAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTL 60 MP +LAL +F IGTTEF+IMGLL +VAAD++VS+ +AGLL++GYALGV GAPI+ + Sbjct: 1 MPLPILALAIASFCIGTTEFVIMGLLPEVAADLRVSIPSAGLLVTGYALGVVFGAPIVAM 60 Query: 61 ATRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLV 120 AT +PRK VL+ L A F +GN CA+AP Y LMAAR+ T+ HG FFG+GSVVA SLV Sbjct: 61 ATAHLPRKPVLVGLAASFVVGNLFCAIAPDYWTLMAARVFTAFGHGAFFGIGSVVAASLV 120 Query: 121 PEDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVPG 180 P +KRASA+A MF GLTL+ +LGVP G G GWR+ F AV IG+I+ +A LVP Sbjct: 121 PRNKRASAMALMFAGLTLSNILGVPAGTALGEAFGWRSTFIAVVGIGLISVAAIAWLVPS 180 Query: 181 HVGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 V A LR EL VLGR QV L + + LF Sbjct: 181 DV-AEPSGGGLRGELRVLGRLQVWLAMLIASLASASLF 217