BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0040.p         (76 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc1133 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Atu Ag...   111   4e-25
BMEI1530 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Bme B...   109   1e-24
mlr7434 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Mlo Me...   107   4e-24
SMc00855 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Sme S...   101   4e-22
PA0009 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Pae Pse...    95   4e-20

>AGc1133 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Atu
          Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 339

 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 47/64 (73%), Positives = 54/64 (84%)

Query: 1  MDALPDHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWN 60
          M  +PDHM P+RSFQ  IL L  +WA++GC +LQPYDME+GAGTFHPATTLRALGPKPW 
Sbjct: 23 MTDIPDHMNPKRSFQALILTLHNYWADKGCAVLQPYDMEVGAGTFHPATTLRALGPKPWK 82

Query: 61 AAYV 64
          AAYV
Sbjct: 83 AAYV 86


>BMEI1530 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Bme Brucella
          melitensis
          Length = 316

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 51/61 (83%)

Query: 4  LPDHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWNAAY 63
          LP HM P RSFQG IL L  +WAE GC ILQPYDME+GAGTFHPATTLR+LGPKPW AAY
Sbjct: 5  LPAHMHPTRSFQGLILTLHNYWAEHGCAILQPYDMEVGAGTFHPATTLRSLGPKPWKAAY 64

Query: 64 V 64
          V
Sbjct: 65 V 65


>mlr7434 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Mlo
          Mesorhizobium loti
          Length = 314

 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 51/61 (83%)

Query: 4  LPDHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWNAAY 63
          +P HM P RSFQG IL L  +WA  GCVILQPYDME+GAGTFHPATTLRALGPK WNAAY
Sbjct: 5  IPAHMHPSRSFQGLILTLHNYWAAYGCVILQPYDMEVGAGTFHPATTLRALGPKRWNAAY 64

Query: 64 V 64
          V
Sbjct: 65 V 65


>SMc00855 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Sme
          Sinorhizobium meliloti
          Length = 311

 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 49/57 (85%)

Query: 8  MRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWNAAYV 64
          M P+RSFQ  IL L  +WA++GC +LQPYDME+GAGTFHPATTLRALGPKPW AAYV
Sbjct: 1  MNPKRSFQALILTLHNYWADKGCAVLQPYDMEVGAGTFHPATTLRALGPKPWRAAYV 57


>PA0009 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Pae Pseudomonas
          aeruginosa
          Length = 315

 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 47/53 (88%)

Query: 12 RSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWNAAYV 64
          R+FQ  ILALQ +WAEQGCV+LQPYDME+GAGTFH AT LRA+GP+ WNAAYV
Sbjct: 9  RTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTATFLRAIGPETWNAAYV 61