BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0198.0010.p (286 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr7265 [G] COG0395 ABC-type sugar transport system, permease co... 193 5e-49 SMc01626 [G] COG0395 ABC-type sugar transport system, permease c... 190 4e-48 mll5300 [G] COG0395 ABC-type sugar transport system, permease co... 154 2e-37 SMc01498 [G] COG0395 ABC-type sugar transport system, permease c... 151 2e-36 PA2340 [G] COG0395 ABC-type sugar transport system, permease com... 142 1e-33 >mlr7265 [G] COG0395 ABC-type sugar transport system, permease component Mlo Mesorhizobium loti Length = 285 Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 118/284 (41%), Positives = 171/284 (60%), Gaps = 9/284 (3%) Query: 9 TSLLLNLLVGIC----GLILALPLVWIAMTSLKQQAEVMAWPPTFMFVPTLENFRILFDV 64 TS L +L G+ + P+VWI M S + ++ PP +F PTL N+ L + Sbjct: 4 TSFLERILRGVALTLVVIFFMFPIVWIFMMSFQTNETILRIPPQLIFEPTLANYTAL--I 61 Query: 65 AQAGATSYGTIKVDFLTPIFNSVVIALGSVVISLLIGVPAGYVLARRDIPLKEDIAFFIL 124 T+ GT+ + F+ ++NSV +++ SV +SLL+GVPA Y AR EDIAF +L Sbjct: 62 TGKLMTAAGTLDIAFMRNLWNSVFLSVTSVAVSLLLGVPAAYAFARHKFRGSEDIAFTLL 121 Query: 125 GFRFAPVLLVVIPLFSVFQAMGLYDTYIGMIWVYQVVTLPMIVWLTRSYIEDIPKDIEEA 184 F+FAP LLV++PL FQ +GL +TY+G+IWVYQ++ LP+I+W+ R Y EDIP DIE A Sbjct: 122 SFKFAPALLVLLPLTLYFQKLGLANTYVGLIWVYQLICLPLILWIVRGYFEDIPADIEYA 181 Query: 185 AAMDGAKPVRIVVHIVLPLLKPGLIGASLLIFLLAWHNFALGLILSST-KVPVTVALLKL 243 + G I LPL PG+ A LL F+ AW+NF L+L+S K PVTV L Sbjct: 182 YRIGGHSWFATFRKIALPLAGPGIAAAGLLAFIFAWNNFVFALVLASADKQPVTVGALAF 241 Query: 244 L-NPGVQFYPVMAAGLVVTMIIPVILIVIGQRHLERGLTFGAVK 286 + + G+Q Y ++A +V+++ + L + QR+L GL+ GAVK Sbjct: 242 ITSSGIQ-YGQISAAIVLSITPTLALALYAQRYLVEGLSLGAVK 284 >SMc01626 [G] COG0395 ABC-type sugar transport system, permease component Sme Sinorhizobium meliloti Length = 285 Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 110/263 (41%), Positives = 162/263 (61%), Gaps = 5/263 (1%) Query: 26 LPLVWIAMTSLKQQAEVMAWPPTFMFVPTLENFRILFDVAQAGATSYGTIKVDFLTPIFN 85 P+VWI + S + ++ PP+ +F PTLEN+ L + T+ GT+ + F+ + N Sbjct: 25 FPIVWIFLMSFQTNETILRIPPSVVFTPTLENYAAL--ITGKLQTASGTLDIAFMRNLGN 82 Query: 86 SVVIALGSVVISLLIGVPAGYVLARRDIPLKEDIAFFILGFRFAPVLLVVIPLFSVFQAM 145 SV++++ SV ++L++GVPA Y AR EDIAF +L FRFAP LLV++PL FQ + Sbjct: 83 SVLLSVASVALALVLGVPAAYAFARHKFRGSEDIAFTLLSFRFAPPLLVLLPLTQYFQWL 142 Query: 146 GLYDTYIGMIWVYQVVTLPMIVWLTRSYIEDIPKDIEEAAAMDGAKPVRIVVHIVLPLLK 205 GL +TY G+IW+YQ++ LP+I+W+ R Y EDI D+E A + G I LPL Sbjct: 143 GLSNTYFGLIWIYQLICLPLILWIVRGYFEDISADVEYAYRIAGHSWFSTFRKIALPLAG 202 Query: 206 PGLIGASLLIFLLAWHNFALGLILSST-KVPVTVALLKLLN-PGVQFYPVMAAGLVVTMI 263 PG+ A LL F+ AW+NF L+L+S K PVTV L + G+Q Y +AA +V+++ Sbjct: 203 PGIAAAGLLAFIFAWNNFVFALVLASADKQPVTVGALAFVTASGIQ-YGQIAAAIVLSIT 261 Query: 264 IPVILIVIGQRHLERGLTFGAVK 286 + L + QR+L GL+ GAVK Sbjct: 262 PTLALALYAQRYLVEGLSLGAVK 284 >mll5300 [G] COG0395 ABC-type sugar transport system, permease component Mlo Mesorhizobium loti Length = 316 Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 85/283 (30%), Positives = 151/283 (53%), Gaps = 22/283 (7%) Query: 26 LPLVWIAMTSLKQQAEVMAWPPTFMFVPTLENFRILFDVAQAGATSY------------G 73 +PL+WI TS K + +A+PP +F P++E + LF Y Sbjct: 33 VPLLWIFATSFKTPPDSIAYPPKIVFQPSIEGYCNLFTTRTRQTPEYINSLGPATGFCDE 92 Query: 74 TIK---------VDFLTPIFNSVVIALGSVVISLLIGVPAGYVLARRDIPLKEDIAFFIL 124 T++ +FL NS++IA GS ++ +G + Y +R +PL +D+ FFIL Sbjct: 93 TVRKRNMVIAGPSNFLPRFLNSLIIAFGSTFCAVFLGTLSAYGFSRFKVPLADDLLFFIL 152 Query: 125 GFRFAPVLLVVIPLFSVFQAMGLYDTYIGMIWVYQVVTLPMIVWLTRSYIEDIPKDIEEA 184 RF P + V IP++ +++ +GL DT +GMI +Y V + + VWL + +I++IP++ EEA Sbjct: 153 STRFMPPIAVAIPIYLMYRELGLSDTALGMILLYTAVNVSLAVWLLKGFIDEIPREYEEA 212 Query: 185 AAMDGAKPVRIVVHIVLPLLKPGLIGASLLIFLLAWHNFALGLILSSTKVPVTVALL-KL 243 A +DG ++ VLP G+ ++ + AW+ +A +L+S + + Sbjct: 213 AMIDGYTRLQAFWRTVLPQATTGIAATAIFCLIFAWNEYAFAALLTSGTAQTAPPFIPTI 272 Query: 244 LNPGVQFYPVMAAGLVVTMIIPVILIVIGQRHLERGLTFGAVK 286 + G Q +P +AAG + ++ ++ ++ ++ L RG+TFGAV+ Sbjct: 273 IGEGGQDWPAVAAGTTIFLVPILVFTILLRKQLLRGITFGAVR 315 >SMc01498 [G] COG0395 ABC-type sugar transport system, permease component Sme Sinorhizobium meliloti Length = 276 Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/285 (32%), Positives = 159/285 (55%), Gaps = 18/285 (6%) Query: 6 STFTSLLLNLLVGICGLILALPLVWIAMTSLKQQAEVMAWPPTFMFVP-TLENFRILFDV 64 ST L+ ++ G+++ P++W +TS K +A+ +A PP F+F T EN+ Sbjct: 6 STGRKLITTVVAWTIGILIFFPILWTFLTSFKTEAQAIASPPVFLFFDWTTENY------ 59 Query: 65 AQAGATSYGTIKVDFLTPIFNSVVIALGSVVISLLIGVPAGYVLARRDIPLKEDIAFFIL 124 S + D+L NSVV++ GS ++ LLI +P+ + +A +D+ ++L Sbjct: 60 ------SEVQSRSDYLKHFMNSVVVSFGSTLLGLLIAIPSAWAMAFSPTKRTKDVLMWML 113 Query: 125 GFRFAPVLLVVIPLFSVFQAMGLYDTYIGMIWVYQVVTLPMIVWLTRSYIEDIPKDIEEA 184 + P + V++P++ +F+ GL DT G++ V ++ LP+I+W+ +Y ++IP +I EA Sbjct: 114 STKMMPPVGVLVPMYLIFRNWGLLDTRTGLVIVLTLINLPIIIWMLYTYFKEIPGEILEA 173 Query: 185 AAMDGAKPVRIVVHIVLPLLKPGLIGASLLIFLLAWHNFALGLILSSTK-VPVTVALLKL 243 A MDGA + +++++ P+ PG+ LL +LAW+ L LS+ K P+T + Sbjct: 174 ARMDGASLTKEIIYVLTPMAIPGIASTLLLNIILAWNEAFWTLNLSAAKAAPLTAFIASY 233 Query: 244 LNPGVQFYPVMAAGLVVTMIIPVILIV--IGQRHLERGLTFGAVK 286 +P FY ++A TM I ILI+ Q+ L RGLTFGAVK Sbjct: 234 SSPEGLFYAKLSAA--STMAIAPILILGWFSQKQLVRGLTFGAVK 276 >PA2340 [G] COG0395 ABC-type sugar transport system, permease component Pae Pseudomonas aeruginosa Length = 277 Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 159/290 (54%), Gaps = 18/290 (6%) Query: 1 MRLKRST-FTSLLLNLLVGICGLILALPLVWIAMTSLKQQAEVMAWPPTFMFVPTLENFR 59 + LK+S + LL LL L+L P+ W+ +TS K + + A PP F+F PTLEN+ Sbjct: 2 LTLKQSRRLRNALLGLLCWGIALLLFFPIFWMLLTSFKSEIDAFATPPQFIFQPTLENYL 61 Query: 60 ILFDVAQAGATSYGTIKVDFLTPIFNSVVIALGSVVISLLIGVPAGYVLARRDIPLKEDI 119 + + + D+ +NS++I+ + ++ +L+ VPA Y +A + + Sbjct: 62 HINE------------RSDYFAYAWNSLLISSSATLLCMLVAVPAAYSMAFFETRHTKRT 109 Query: 120 AFFILGFRFAPVLLVVIPLFSVFQAMGLYDTYIGMIWVYQVVTLPMIVWLTRSYIEDIPK 179 ++L + P + V++P++ + + GL D+ + +I VY ++ LP++VW+ +Y +DIP Sbjct: 110 LLWMLSTKMLPPVGVLMPIYLLAKQFGLLDSRLALIIVYTLINLPIVVWMVYTYFKDIPV 169 Query: 180 DIEEAAAMDGAKPVRIVVHIVLPLLKPGLIGASLLIFLLAWHNFALGLIL-SSTKVPVTV 238 DI EAA +DGA + +V ++LP+ + GL LL +L W+ L L SS P+T Sbjct: 170 DILEAARLDGAGTWQEIVRVLLPIARGGLASTLLLSLILCWNEAFWSLNLTSSAAAPLTA 229 Query: 239 ALLKLLNPGVQFYPVMAAGLVVTMIIPVILIV--IGQRHLERGLTFGAVK 286 + +P F+ ++A V T+ IL+ I Q+ L RGL+FGAVK Sbjct: 230 LVASYSSPEGLFWAKLSA--VSTLACAPILVFGWISQKQLVRGLSFGAVK 277