BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0053.p (303 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll8435 [M] COG2148 Sugar transferases involved in lipopolysacch... 414 e-115 BMEI1177 [M] COG2148 Sugar transferases involved in lipopolysacc... 406 e-113 SMc01792 [M] COG2148 Sugar transferases involved in lipopolysacc... 394 e-109 AGc2280 [M] COG2148 Sugar transferases involved in lipopolysacch... 392 e-109 PA2231 [M] COG2148 Sugar transferases involved in lipopolysaccha... 285 6e-77 >mll8435 [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis Mlo Mesorhizobium loti Length = 462 Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust. Identities = 194/303 (64%), Positives = 244/303 (80%), Gaps = 2/303 (0%) Query: 1 VLGVFDDRNDDRATNTCAGSPKLGKIDDIVEFARRTRVDLVLFALPISAETRILEMLKKL 60 + G+FDDR+D R+ AG PKLG I +++EFAR R+D+++ +LP++AETR+L++LKKL Sbjct: 162 ICGIFDDRSDKRSPPIVAGYPKLGTISELIEFARIARIDMLIVSLPLTAETRVLQLLKKL 221 Query: 61 WVLPVDIRLSAHTNKLRFHPRSYSYIGKVPTLDMFEAPITDWDLVLKWLFDRVVGGLALV 120 WVLPVDIRLSAH+N L+F PR+YS+IG VP LD+F+ PI DWD V K FD V + ++ Sbjct: 222 WVLPVDIRLSAHSNALQFRPRAYSFIGSVPMLDIFDKPINDWDSVAKRAFDIVFSVIGII 281 Query: 121 AALPVLGLVALAVKLDSPGPVLFRQKRFGFNNERIDVYKFRSLYHHQADPTASKVVTKND 180 PV+ A+A+KLDS GPVLF+QKR GFNNE I+VYKFRS+Y ++DPTA + VTKND Sbjct: 282 VFSPVMLATAIAIKLDSKGPVLFKQKRHGFNNEIIEVYKFRSMYTDRSDPTAKQTVTKND 341 Query: 181 PRVTRVGRFIRKTSLDELPQLFNVVLKGNLSLVGPRPHAVQSKLENRLFDEAVDGYFARH 240 PRVTRVGRFIRKTS+DELPQ N +L G LSL+GPRPHA+ ++ N L++E VDGYFARH Sbjct: 342 PRVTRVGRFIRKTSIDELPQFVNSLL-GTLSLIGPRPHAIAAQSHNLLYNEVVDGYFARH 400 Query: 241 RVKPGITGWAQINGWRGEVDTDEKIQKRVEYDLYYIENWSVLFDLYILLKTPFSLLTKSE 300 +VKPG+TGWAQINGWRGE+DT+EKI+ R EYDLYYIENWS+LFDL IL TP LL +E Sbjct: 401 KVKPGVTGWAQINGWRGEMDTNEKIRMRTEYDLYYIENWSLLFDLRILFLTPIRLL-NTE 459 Query: 301 NAY 303 NAY Sbjct: 460 NAY 462 >BMEI1177 [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis Bme Brucella melitensis Length = 512 Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/303 (64%), Positives = 234/303 (77%), Gaps = 2/303 (0%) Query: 1 VLGVFDDRNDDRATNTCAGSPKLGKIDDIVEFARRTRVDLVLFALPISAETRILEMLKKL 60 + G+FDD +D R+ A PK+G IDD++EFAR +DL++ +LPISAE R+L +LKKL Sbjct: 212 ICGIFDDHDDRRSPPIVAVYPKIGNIDDLIEFARIAHIDLLIISLPISAELRVLSLLKKL 271 Query: 61 WVLPVDIRLSAHTNKLRFHPRSYSYIGKVPTLDMFEAPITDWDLVLKWLFDRVVGGLALV 120 WVLPVDIRLSA N LRFHPR+YSY+G VP LD+F+ PI DWD V K +FD V L ++ Sbjct: 272 WVLPVDIRLSALNNHLRFHPRAYSYVGSVPMLDIFDKPINDWDSVAKRIFDIVFSLLGII 331 Query: 121 AALPVLGLVALAVKLDSPGPVLFRQKRFGFNNERIDVYKFRSLYHHQADPTASKVVTKND 180 P++ A+A+KLDS GPV+F+QKR GFNNE I+V+KFRS+Y + DP A +V TKND Sbjct: 332 LLSPIMLATAIAIKLDSKGPVIFKQKRHGFNNEVINVWKFRSMYADKCDPAAKQVTTKND 391 Query: 181 PRVTRVGRFIRKTSLDELPQLFNVVLKGNLSLVGPRPHAVQSKLENRLFDEAVDGYFARH 240 PRVTRVGRFIRKTS+DELPQ FN L G LSLVGPRPHAV + N LF+E VDGYFARH Sbjct: 392 PRVTRVGRFIRKTSIDELPQFFN-ALSGTLSLVGPRPHAVAAHSHNVLFNEVVDGYFARH 450 Query: 241 RVKPGITGWAQINGWRGEVDTDEKIQKRVEYDLYYIENWSVLFDLYILLKTPFSLLTKSE 300 RVKPG+TGWAQINGWRGE+D EKI+ R EYDL+YIENWS+ FDL IL TP LL +E Sbjct: 451 RVKPGVTGWAQINGWRGEIDNAEKIRMRTEYDLFYIENWSLWFDLKILFLTPIRLL-NTE 509 Query: 301 NAY 303 NAY Sbjct: 510 NAY 512 >SMc01792 [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis Sme Sinorhizobium meliloti Length = 520 Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/303 (62%), Positives = 241/303 (79%), Gaps = 2/303 (0%) Query: 1 VLGVFDDRNDDRATNTCAGSPKLGKIDDIVEFARRTRVDLVLFALPISAETRILEMLKKL 60 + G+FDDR++ R+ N AG PKLG +D++VEFAR R+D+++ +LP++AE RIL +L+KL Sbjct: 220 ICGIFDDRDERRSPNVIAGYPKLGTVDELVEFARLARIDMLIISLPLTAEKRILALLRKL 279 Query: 61 WVLPVDIRLSAHTNKLRFHPRSYSYIGKVPTLDMFEAPITDWDLVLKWLFDRVVGGLALV 120 WVLPVDIRL+AH N LRF PRSYS++G+VP LD+F+ PI DWD V K FD +AL Sbjct: 280 WVLPVDIRLAAHANNLRFRPRSYSHVGQVPMLDIFDKPIADWDSVAKRCFDIFFSLVALA 339 Query: 121 AALPVLGLVALAVKLDSPGPVLFRQKRFGFNNERIDVYKFRSLYHHQADPTASKVVTKND 180 PV+ A+AVK+ SPGP++F+Q R GFNNE I+VYKFRS+Y H +DPTA VTKND Sbjct: 340 LLWPVMLAAAVAVKVTSPGPIIFKQHRHGFNNETIEVYKFRSMYTHMSDPTARNAVTKND 399 Query: 181 PRVTRVGRFIRKTSLDELPQLFNVVLKGNLSLVGPRPHAVQSKLENRLFDEAVDGYFARH 240 PRVT +GRF+RK+S+DELPQ FN VLKG LSLVGPRPHAV ++ ++R + + V+GYFARH Sbjct: 400 PRVTPLGRFLRKSSIDELPQFFN-VLKGELSLVGPRPHAVLAQTKDRTYSDVVEGYFARH 458 Query: 241 RVKPGITGWAQINGWRGEVDTDEKIQKRVEYDLYYIENWSVLFDLYILLKTPFSLLTKSE 300 RVKPG+TGWAQINGWRGE+D DEKI+ R +DLYYIENWS+L DL IL+ TPF LL +E Sbjct: 459 RVKPGVTGWAQINGWRGEIDNDEKIRFRTAFDLYYIENWSLLLDLKILILTPFRLLN-TE 517 Query: 301 NAY 303 NAY Sbjct: 518 NAY 520 >AGc2280 [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 522 Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/303 (62%), Positives = 234/303 (77%), Gaps = 2/303 (0%) Query: 1 VLGVFDDRNDDRATNTCAGSPKLGKIDDIVEFARRTRVDLVLFALPISAETRILEMLKKL 60 + G+FDDR +R+ AG PKLG ++VEFAR T++D+++ ALP+SAE RIL++L+KL Sbjct: 222 ICGIFDDRKSERSPEVVAGYPKLGTFAELVEFARLTKLDMLIIALPLSAEARILQLLRKL 281 Query: 61 WVLPVDIRLSAHTNKLRFHPRSYSYIGKVPTLDMFEAPITDWDLVLKWLFDRVVGGLALV 120 WVLPVDIR++AH NKLRF PR+YS++GKVP LD+F+ PI DWD V K LFD + + Sbjct: 282 WVLPVDIRIAAHANKLRFRPRAYSHVGKVPMLDVFDKPIRDWDSVAKRLFDITFSLMGIA 341 Query: 121 AALPVLGLVALAVKLDSPGPVLFRQKRFGFNNERIDVYKFRSLYHHQADPTASKVVTKND 180 PV+ +AVK S GPVLF+QKR GFNNE I+V+KFRS+Y +DPTA K VTKND Sbjct: 342 LFWPVMLAAGIAVKATSKGPVLFKQKRHGFNNETINVWKFRSMYTELSDPTAKKAVTKND 401 Query: 181 PRVTRVGRFIRKTSLDELPQLFNVVLKGNLSLVGPRPHAVQSKLENRLFDEAVDGYFARH 240 PRVT VGRF+RK+S+DELPQLFN VL G+LSLVGPRPHAV ++ + + E V+ YFARH Sbjct: 402 PRVTPVGRFLRKSSMDELPQLFN-VLYGDLSLVGPRPHAVHAQTGDLKYTEVVEHYFARH 460 Query: 241 RVKPGITGWAQINGWRGEVDTDEKIQKRVEYDLYYIENWSVLFDLYILLKTPFSLLTKSE 300 +VKPG+TGWAQINGWRGE+D +KI+ R EYDLYYIENWS+ DL IL TP LL KSE Sbjct: 461 KVKPGVTGWAQINGWRGEIDHGDKIKFRTEYDLYYIENWSLFLDLKILFLTPIRLL-KSE 519 Query: 301 NAY 303 NAY Sbjct: 520 NAY 522 >PA2231 [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis Pae Pseudomonas aeruginosa Length = 478 Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 153/299 (51%), Positives = 197/299 (65%), Gaps = 3/299 (1%) Query: 1 VLGVFDDRNDDRATNTCAGSPKLGKIDDIVEFARRTRVDLVLFALPISAETRILEMLKKL 60 ++G DDR++ R P LG D+ + R+ +VD VL ALP AE RI ++ +L Sbjct: 179 IIGFIDDRSE-RVPENYNSLPLLGNTKDLEKLIRQEQVDQVLVALPWFAEGRIGAIVHRL 237 Query: 61 WVLPVDIRLSAHTNKLRFHPRSYSYIGKVPTLDMFEAPITDWDLVLKWLFDRVVGGLALV 120 LPV++ L R + +P + E P+ W ++K D V+ +ALV Sbjct: 238 RQLPVNVLLVPDMAAFRHAHNRIVDVSGIPMFNASELPLRGWSPLIKRCEDLVLASIALV 297 Query: 121 AALPVLGLVALAVKLDSPGPVLFRQKRFGFNNERIDVYKFRSLYHHQADPTASKVVTKND 180 P++ LVALA++LDS GPVLFRQKR+G+NN I V+KFRS+Y + D A + T++D Sbjct: 298 LFAPLMALVALAIRLDSKGPVLFRQKRYGYNNRLIWVFKFRSMYTERTDANAERQTTRDD 357 Query: 181 PRVTRVGRFIRKTSLDELPQLFNVVLKGNLSLVGPRPHAVQSKLENRLFDEAVDGYFARH 240 R+TRVGRFIRKTS+DELPQLFN VL G++S+VGPRPHA +K F+EAV Y +RH Sbjct: 358 DRITRVGRFIRKTSIDELPQLFN-VLAGSMSMVGPRPHATATKAAGIPFEEAVSEYSSRH 416 Query: 241 RVKPGITGWAQINGWRGEVDTDEKIQKRVEYDLYYIENWSVLFDLYILLKT-PFSLLTK 298 RVKPGITGWAQING+RGE DT KI+KRVEYDL YI WSV FDLYIL +T P LLTK Sbjct: 417 RVKPGITGWAQINGYRGETDTLHKIKKRVEYDLEYIAKWSVWFDLYILFRTVPAVLLTK 475