BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0016.p (581 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0456 [R] COG4178 ABC-type uncharacterized transport system, p... 479 e-135 PM1072 [R] COG4178 ABC-type uncharacterized transport system, pe... 384 e-106 PM0041 [R] COG4178 ABC-type uncharacterized transport system, pe... 379 e-104 mll4764 Non COG 360 4e-99 HI0036 [R] COG4178 ABC-type uncharacterized transport system, pe... 360 5e-99 >RSc0456 [R] COG4178 ABC-type uncharacterized transport system, permease and ATPase components Rso Ralstonia solanacearum Length = 614 Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust. Identities = 260/579 (44%), Positives = 362/579 (62%), Gaps = 12/579 (2%) Query: 1 VNNIRSTLATVWRIASPYFNSEDKWAGRGLLAAVIAIELAIVGINVLLTQWNNRFYNALQ 60 V++ R L+ W++ PY+ S+D++ LLA V+A+ L +V +NVL T WN FYNAL+ Sbjct: 22 VHHGRLNLSETWQLIKPYWFSQDRYKAWSLLALVVALSLFVVYMNVLFTDWNRLFYNALE 81 Query: 61 ERNWDSFVSEIIYFSVLVAFFILLAVYQLYLNQWLQIRWRQWMTTHYLGDWLRQANHYRM 120 +++ F ++ FS + A I+ +V + Y L++RWR W+T +L WL + YR+ Sbjct: 82 QKDKAEFWRQLGRFSWIAALIIVASVLRQYYTMMLRMRWRTWITGSFLDGWLGKQAFYRL 141 Query: 121 QLQGDAADNPDQRMTDDVKLFVDRTLTLGLGLLSSVVTLASFLTLLWGLSNEAPLHLFGT 180 + Q ADNPDQR+ DD++ F D TLTL LG L+S VTL SF +LW +S L G Sbjct: 142 E-QTHTADNPDQRIADDLRNFTDATLTLALGFLNSAVTLVSFFGILWAVSGPLAFALGGH 200 Query: 181 EYSIPGYLVWCALIYSALGTVLTHLIGWPLVGIDFKQQQYEADFRFNLVRVRENSEQIAL 240 ++ IPGY+VW AL+YS + +V H +G PL+G+ F+Q++YEA FRF LVRVRENSE IAL Sbjct: 201 DFVIPGYMVWFALLYSVVCSVAIHFVGRPLIGLSFQQERYEAYFRFLLVRVRENSESIAL 260 Query: 241 LQGEQAERERLRVRFGRVVENWIALMNRTKKITAFTASYNQASVIFPYVLVAPAYFAQKI 300 +GE E+ LR RF R+ NW LM+ T ++ ++ Y Q ++IFP+++ AP YF + Sbjct: 261 YRGEPTEKAILRGRFERIRANWNQLMDYTLRLNFASSGYGQFAIIFPFLVSAPRYFGGTL 320 Query: 301 QLGGMMQTASAFSNVQGAFSYFVTIYRQLAEWQAVVNRLDGFEAGIAAASNLTK-----R 355 LGGMMQ A+AF VQGA S+FV Y L W+A NRL F+ + AA + R Sbjct: 321 TLGGMMQVATAFGQVQGAMSWFVDNYSTLVSWKASTNRLIEFQRAMRAAEREEERRAGIR 380 Query: 356 DDRIQVTATPGGGAVSLQDLVLRLPDGTP---LLNADRFGFRKGEGTLMTGPSGAGKSTL 412 D + A P A+ L L LP P L+ +GE L+ GPSG GKSTL Sbjct: 381 DIEVDAAAVP---AIEAHGLALNLPGRAPQDVLVEPFDMAIGRGERVLVNGPSGCGKSTL 437 Query: 413 FRAIAGIWPFGDGAVEIPANASLMMLPQRPYLPIGSLHDAVVYPGEAAQFDAGRVRDVLT 472 RA+AGIWP+G G ++IP +A ++ LPQR YLP G+L DA+ YP ++ A R+ +VL Sbjct: 438 VRAVAGIWPYGTGRIDIPDDARVLFLPQRSYLPAGTLADALCYPDLPTEYAAERLAEVLV 497 Query: 473 AVGLPQLAARLEEHAHWNRMLSLGEQQRLGIARALLHAPQFLFLDEATASLDEPAEAALY 532 A LP L L+E ++W+ LS GEQQRL ARALL P +LFLDEAT++LDE EA +Y Sbjct: 498 ACRLPALVGLLDEVSNWSLRLSPGEQQRLAFARALLQRPDYLFLDEATSALDEDTEAFMY 557 Query: 533 RLIAERLPGTTVVSIGHRSTLDAFHQRNVTLVRDGDRFT 571 L+ + +P T+VS+ HRST+ FH R + V +GD T Sbjct: 558 GLMLDAMPEVTLVSVAHRSTVARFHHRRLRYVPEGDALT 596 >PM1072 [R] COG4178 ABC-type uncharacterized transport system, permease and ATPase components Pmu Pasteurella multocida Length = 585 Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/553 (37%), Positives = 313/553 (56%), Gaps = 12/553 (2%) Query: 12 WRIASPYFNSEDKWAGRGLLAAVIAIELAIVGINVLLTQWNNRFYNALQERNWDSFVSEI 71 W +A YF+ + ++ L V I++L++ W N Y +LQ+ N F ++ Sbjct: 43 WLLAEDYFHPKHNLLPLFYFMIIVFFNLLSVRIDILVSNWYNALYKSLQDMNETVFWQQM 102 Query: 72 IYFSVLVAFFILLAVYQLYLNQWLQIRWRQWMTTHYLGDWLRQANHYRMQLQGDAADNPD 131 + F+V+ + I A+ YL++ I WR W+ L W +Y+ Q DNPD Sbjct: 103 VVFAVIASSSITNALLTYYLSKRFLIHWRMWLNNRMLNKWTENQAYYKTQYVEAQLDNPD 162 Query: 132 QRMTDDVKLFVDRTLTLGLGLLSSVVTLASFLTLLWGLSNEAPLHLFGTEYSIPGYLVWC 191 QR+ DV FV +L GL+SS+V++ +F +LW LS P+ + E IP +V+ Sbjct: 163 QRIQQDVSSFVSTSLDFATGLISSIVSIIAFTIILWNLS--GPMTIANIE--IPHAMVFL 218 Query: 192 ALIYSALGTVLTHLIGWPLVGIDFKQQQYEADFRFNLVRVRENSEQIALLQGEQAERERL 251 IY +++ IG PL+ ++F ++ A++R++L+R++E +E IA +GE+ E+ L Sbjct: 219 VFIYVLFSSIVAFKIGRPLIQLNFANERLNANYRYSLIRLKEYAESIAFYRGEKMEKRLL 278 Query: 252 RVRFGRVVENWIALMNRTKKITAFTASYNQASVIFPYVLVAPAYFAQKIQLGGMMQTASA 311 +F +V++N ++ RT K++ F Q SV+FP V+ YF Q+I LG +MQT+SA Sbjct: 279 TTQFNQVIDNVWQVIYRTLKLSGFNLIITQISVVFPLVIQVTRYFRQQITLGDLMQTSSA 338 Query: 312 FSNVQGAFSYFVTIYRQLAEWQAVVNRLDGFEAGIAAASNLTKRDDRIQVTATPGGGAVS 371 F VQ + S+F Y A ++AV+NRL GF + I AA+ +K + T + Sbjct: 339 FGRVQSSLSFFRNSYDDFAAYRAVLNRLTGFHSAIKAANRPSK------LVFTESRHDIG 392 Query: 372 LQDLVLRLPDGTPLLNADRFGFRKGEGTLMTGPSGAGKSTLFRAIAGIWPFGDGAVEIPA 431 DL + P G L++ F G L+ G SG GK+TL R IAG+WP+ G ++ P Sbjct: 393 FHDLKVETPQGKTLIDKLNLQFPLGTWLLIQGHSGVGKTTLLRTIAGLWPYASGTIQRPQ 452 Query: 432 NASLMMLPQRPYLPIGSLHDAVVYPGEAAQ-FDAGRVRDVLTAVGLPQLAARLEEHAHWN 490 +L L Q+PYLP G L DA+ YP A + + +V D+L V L L+ +LE+ W Sbjct: 453 QDTL-FLSQKPYLPQGRLLDALFYPELAPEDVNEQQVIDILAKVQLGHLSDKLEQENDWT 511 Query: 491 RMLSLGEQQRLGIARALLHAPQFLFLDEATASLDEPAEAALYRLIAERLPGTTVVSIGHR 550 R+LSLGEQQRL AR LLH P +FLDEATAS+DE E A+YRL+ + LP TV+S+GHR Sbjct: 512 RVLSLGEQQRLSFARILLHKPTVVFLDEATASMDEGLEDAMYRLLKDELPQITVISVGHR 571 Query: 551 STLDAFHQRNVTL 563 STL H + + + Sbjct: 572 STLIPHHSQQLHI 584 >PM0041 [R] COG4178 ABC-type uncharacterized transport system, permease and ATPase components Pmu Pasteurella multocida Length = 564 Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust. Identities = 210/553 (37%), Positives = 313/553 (56%), Gaps = 9/553 (1%) Query: 11 VWRIASPYFNSEDKWAGRGLLAAVIAIELAIVGINVLLTQWNNRFYNALQERNWDSFVSE 70 ++ +A ++ + W+ +LA VIAI + IV +NV++ W+ FY+ L E N + Sbjct: 13 LFHLARIFWGDKKNWSSWIILATVIAIGVFIVSLNVMINDWSKHFYDTLAELNVQLILPL 72 Query: 71 IIYFSVLVAFFILLAVYQLYLNQWLQIRWRQWMTTHYLGDWLRQANHYRMQLQGDAADNP 130 I + + VA +IL++VY+ +L + L IRWRQ MT H++ W + Y++ Q + DNP Sbjct: 73 IQEYLIYVALYILVSVYRSWLRKLLIIRWRQAMTEHFVERWFSKKIFYKLA-QENKMDNP 131 Query: 131 DQRMTDDVKLFVDRTLTLGLGLLSSVVTLASFLTLLWGLSNEAPLHLFGTEYSIPGYLVW 190 DQR+ +D+ LF +L L + + + V L SFL +LW LS +LFG + I GYLVW Sbjct: 132 DQRIAEDIHLFAKYSLELTVSFVLNFVQLGSFLMILWNLSGSPTFNLFGYDIVIKGYLVW 191 Query: 191 CALIYSALGTVLTHLIGWPLVGIDFKQQQYEADFRFNLVRVRENSEQIALLQGEQAERER 250 A+IY+ LG+V+THLIG L +++ QQ YEA FR NLVR E++EQIAL GEQ E+ + Sbjct: 192 VAIIYAFLGSVVTHLIGRKLHPLNYSQQVYEATFRGNLVRRHEHAEQIALYGGEQTEKRK 251 Query: 251 LRVRFGRVVENWIALMNRTKKITAFTASYNQASVIFPYVLVAPAYFAQKIQLGGMMQTAS 310 L F +V+NW A+M++ + + FT Y++ S + P + P + I GG+MQ S Sbjct: 252 LADEFAHIVKNWRAIMDKERNLGFFTVGYSRFSSMLPVLCAIPLLLLKIITFGGLMQIRS 311 Query: 311 AFSNVQGAFSYFVTIYRQLAEWQAVVNRLDGFEAGIAAASNLTKRDDRIQVTATPGGGAV 370 AF V + S+F+ Y L EW A ++RL F I + + +P + Sbjct: 312 AFGTVLSSLSWFIYAYTILPEWSATISRLAQFNREIE------QFEKSYCTPQSPKKAMI 365 Query: 371 SLQDLVLRLPDGTPLLNADRFGFRKGEGTLMTGPSGAGKSTLFRAIAGIWPFGDGAVEIP 430 S+++L L D LL +F ++ E + G SG GKS+L R + GIW + G +I Sbjct: 366 SVENLSLFTSDHQLLLKNIQFSVQEKEWLHLKGQSGLGKSSLLRTLCGIWQYYSGQYQIC 425 Query: 431 ANASLMMLPQRPYLPIGSLHDAVVYPGEAAQFDAGRVRDVLTAVGLPQLAARLEEHAHWN 490 L +PQ+ YL G+L + + YP + + + VL VGL + RLEE W+ Sbjct: 426 LKNHL-FIPQKTYLNEGNLAELLRYPNQ-HHYSPQELNQVLNLVGLEKWQNRLEEVLPWH 483 Query: 491 RMLSLGEQQRLGIARALLHAPQFLFLDEATASLDEPAEAALYRLIAERLPGTTVVSIGHR 550 +LS GEQQRL AR LL PQ L LDEAT++LDE + L +LI E+LP TTV+ H+ Sbjct: 484 IVLSHGEQQRLAFARILLTKPQLLCLDEATSNLDETSALLLMQLIREQLPNTTVIFTSHQ 543 Query: 551 STLDAFHQRNVTL 563 + + R V L Sbjct: 544 TKISQLADREVDL 556 >mll4764 Non COG Length = 687 Score = 360 bits (925), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 192/534 (35%), Positives = 306/534 (57%), Gaps = 8/534 (1%) Query: 39 LAIVGINVL----LTQWNNRFYNALQERNWDSFVSEIIYFSVLVAFFILLAVYQLYLNQW 94 L ++GINV + WN ++A+++R+ + F LV + L V Q+YL Sbjct: 114 LILIGINVGFQYGINVWNRSIFDAIEKRDAHTVYFLSAVFVPLVIGSMSLVVAQVYLRMT 173 Query: 95 LQIRWRQWMTTHYLGDWLRQANHYRMQL-QGDAADNPDQRMTDDVKLFVDRTLTLGLGLL 153 +Q RWR W++T + WL +Y++ L QGD NP+ R+++D+++ + + G++ Sbjct: 174 MQRRWRSWLSTSVIARWLANGRYYQLNLVQGDH-QNPEARLSEDLRVATEAPVDFVAGVI 232 Query: 154 SSVVTLASFLTLLWGLSNEAPLHLFGTEYSIPGYLVWCALIYSALGTVLTHLIGWPLVGI 213 + ++ ++F+ +LW + +L G+ +++PG+LV A+IY+A+ + +IG V + Sbjct: 233 VATLSASTFIVVLWTIGGALSFNLGGSTFTVPGFLVVTAVIYAAITSTSMFVIGRNFVRL 292 Query: 214 DFKQQQYEADFRFNLVRVRENSEQIALLQGEQAERERLRVRFGRVVENWIALMNRTKKIT 273 ++ Q EA+FR+ L RVREN E IALL GE+ ER + F V++ W L + + Sbjct: 293 SEEKNQAEAEFRYVLTRVRENGESIALLGGEEEERSGIDKTFSGVLKRWAQLTGQHMRTA 352 Query: 274 AFTASYNQASVIFPYVLVAPAYFAQKIQLGGMMQTASAFSNVQGAFSYFVTIYRQLAEWQ 333 + + + + P +L AP + + LG +MQ ASAF+ VQG+F + V Y +LA+W Sbjct: 353 LVSQGSSLFAPVVPVLLCAPKFLEGSMSLGQVMQAASAFAIVQGSFGWLVDNYPRLADWN 412 Query: 334 AVVNRLDGFEAGIAAASNLTKRDD--RIQVTATPGGGAVSLQDLVLRLPDGTPLLNADRF 391 A R+ + + D+ RIQ T G +SL +L + L DGT ++ Sbjct: 413 ASARRIASLMMSLDGLERAEQSDELGRIQHGETKGDTMLSLDNLSVTLDDGTSMVKETEV 472 Query: 392 GFRKGEGTLMTGPSGAGKSTLFRAIAGIWPFGDGAVEIPANASLMMLPQRPYLPIGSLHD 451 GE L++G SG+GKSTL RAIAG+WP+G G+V + L MLPQRPY+P G+L Sbjct: 473 AVEAGERVLVSGESGSGKSTLVRAIAGLWPWGSGSVNFHPDKRLFMLPQRPYIPSGTLRR 532 Query: 452 AVVYPGEAAQFDAGRVRDVLTAVGLPQLAARLEEHAHWNRMLSLGEQQRLGIARALLHAP 511 V YP A + +++ L VGL LA R++E A W++ LS GE+QR+ AR LLH P Sbjct: 533 VVAYPAAANTWKLEQIKAALDKVGLGHLAGRIKEEAPWDQTLSGGEKQRVAFARLLLHRP 592 Query: 512 QFLFLDEATASLDEPAEAALYRLIAERLPGTTVVSIGHRSTLDAFHQRNVTLVR 565 + LDEAT++LDE ++ + ++ LP T+VS+ HR+ L+AFH R +TL R Sbjct: 593 DIVVLDEATSALDEKSQDQMMEMVIRELPEVTIVSVAHRAELEAFHTRKITLER 646 >HI0036 [R] COG4178 ABC-type uncharacterized transport system, permease and ATPase components Hin Haemophilus influenzae Length = 592 Score = 360 bits (924), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 191/557 (34%), Positives = 306/557 (54%), Gaps = 11/557 (1%) Query: 12 WRIASPYFNSEDKWAGRGLLAAVIAIELAIVGINVLLTQWNNRFYNALQERNWDSFVSEI 71 W A Y + + ++A+ L V I+++ ++W Y +LQE N F ++ Sbjct: 43 WMFAGGYLSPKRSIKPILFFLLIVAMTLLSVRISLVNSEWYKNMYTSLQEFNEHVFWQQM 102 Query: 72 IYFSVLVAFFILLAVYQLYLNQWLQIRWRQWMTTHYLGDWLRQANHYRMQLQGDAADNPD 131 F V+ A + A+ YL Q I W +W+ + W+ +Y+ Q + DNPD Sbjct: 103 GLFCVIAASSVSAALVSYYLEQRFVINWIEWLNEQLVNKWMAHRAYYKTQYLSENLDNPD 162 Query: 132 QRMTDDVKLFVDRTLTLGLGLLSSVVTLASFLTLLWGLSNEAPLHLFGTEYSIPGYLVWC 191 QR+ DV+ +V TL+L G++ +V ++ S+ LLWGL+ P+ + G E IP +V+ Sbjct: 163 QRIQQDVQSYVKTTLSLSTGVIDAVTSMISYTILLWGLA--GPMIVLGVE--IPHMMVFL 218 Query: 192 ALIYSALGTVLTHLIGWPLVGIDFKQQQYEADFRFNLVRVRENSEQIALLQGEQAERERL 251 Y T++ +G PL+ ++F ++ A++R++L+R++E +E IA GE+ E+ +L Sbjct: 219 VFGYVIFTTLIAFWLGRPLISLNFINERLNANYRYSLIRIKEYAESIAFYAGEKVEKNQL 278 Query: 252 RVRFGRVVENWIALMNRTKKITAFTASYNQASVIFPYVLVAPAYFAQKIQLGGMMQTASA 311 +F V+ N ++ RT K + F +Q SV+FP ++ YF ++I+LG +MQT Sbjct: 279 YQQFNAVIHNMWVIIFRTLKFSGFNLVVSQISVVFPLLIQVGRYFEKQIKLGDLMQTLQV 338 Query: 312 FSNVQGAFSYFVTIYRQLAEWQAVVNRLDGFEAGIAAASNLTKRDDRIQVTATPGGGAVS 371 F + S+F + Y A ++A ++RL GF I A+N + Q+ P V Sbjct: 339 FGQLHANLSFFRSTYDNFASYKATLDRLTGFCYAIEKANN----KSQTQIHNHPTD--VI 392 Query: 372 LQDLVLRLPDGTPLLNADRFGFRKGEGTLMTGPSGAGKSTLFRAIAGIWPFGDGAVEIPA 431 ++L ++ P G L+ +G L+ G SGAGK+TL R IAG+W + +G + P Sbjct: 393 FKNLSIQNPLGHTLIKHLNITLPQGTSLLIQGKSGAGKTTLLRTIAGLWSYAEGEINCPT 452 Query: 432 NASLMMLPQRPYLPIGSLHDAVVYPGEAAQFDAGRVRDVLTAVGLPQLAARLEEHAHWNR 491 + L L Q+PY+P G+L A+ YP A + ++L V L LA +LE+ W R Sbjct: 453 HNQLF-LSQKPYVPQGNLMSALAYPNNADNISHTQAVEILNKVQLGHLAEQLEKEQDWTR 511 Query: 492 MLSLGEQQRLGIARALLHAPQFLFLDEATASLDEPAEAALYRLIAERLPGTTVVSIGHRS 551 +LSLGEQQRL AR +LH P FLDEATAS+DE E ++Y+L+ + LP TT++S+GHRS Sbjct: 512 ILSLGEQQRLAFARLILHKPAVAFLDEATASMDEGLEFSMYQLLQQELPQTTIISVGHRS 571 Query: 552 TLDAFHQRNVTLVRDGD 568 TL HQ+ + L G Sbjct: 572 TLKTLHQQQLILQDKGQ 588