BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0195.0012.p         (154 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc00833 [C] COG0277 FAD/FMN-containing dehydrogenases Sme Sinor...   110   1e-24
mlr6919 [C] COG0277 FAD/FMN-containing dehydrogenases Mlo Mesorh...   105   3e-23
BMEII1062 [C] COG0277 FAD/FMN-containing dehydrogenases Bme Bruc...   102   3e-22
AGc1191 [C] COG0277 FAD/FMN-containing dehydrogenases Atu Agroba...   102   4e-22
RSc2667 [C] COG0277 FAD/FMN-containing dehydrogenases Rso Ralsto...    69   3e-12

>SMc00833 [C] COG0277 FAD/FMN-containing dehydrogenases Sme Sinorhizobium
           meliloti
          Length = 405

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 87/148 (58%), Gaps = 6/148 (4%)

Query: 1   LSQTLSSFGVVDSLADDASAAIWSALRDVVPFAANGALGAWPVWRIVCPPASGGALGQAL 60
           L + LS FG +  L +  +  +W+ +RDV P+A +G     P+WRI   P++G  L  AL
Sbjct: 256 LGEKLSRFGRISQLDEAQTRTLWAEIRDVKPYA-DGT--RRPLWRISVAPSAGHQLVAAL 312

Query: 61  SRATGGDVVYDWGGGLIWTAVPPGADAQAMLVRGQVEAIGG-HATLIRATEDVRRAVDVF 119
              TG D  YDW GGL+W  +   AD +A L+R  + A+GG HA L+RA E+ R  +  F
Sbjct: 313 RLQTGVDAFYDWQGGLVWLRME--ADPEAELLRRYIGAVGGGHAALLRAGEEARGRIPAF 370

Query: 120 QPQAAGLAALGERVRASFDPRSVLNRGR 147
           +PQ   +A L ER+RA FDP  + N GR
Sbjct: 371 EPQPPAVARLSERIRAQFDPSGIFNPGR 398


>mlr6919 [C] COG0277 FAD/FMN-containing dehydrogenases Mlo Mesorhizobium
           loti
          Length = 382

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 85/149 (57%), Gaps = 5/149 (3%)

Query: 1   LSQTLSSFGVVDSLADDASAAIWSALRDVVPFAANGALGAWPVWRIVCPPASGGALGQAL 60
           L   L   G ++ +A +AS  IW  +RD+ PFA +G+    PVWR+   P     +   L
Sbjct: 237 LKTLLGKAGPLEEIAGEASHLIWRDVRDIRPFA-DGS--EKPVWRVSMAPFHAHQMVLTL 293

Query: 61  SRATGGDVVYDWGGGLIWTAVPPGADAQAMLVRGQVEAIGG-HATLIRATEDVRRAVDVF 119
                    YDW GGL+W  +  G D +A L+RG +   GG HATL+RAT   R A+ VF
Sbjct: 294 RMQAAVSAFYDWQGGLVWLRMEEG-DPEASLLRGLLRKHGGGHATLVRATPAHRAALPVF 352

Query: 120 QPQAAGLAALGERVRASFDPRSVLNRGRM 148
           +PQ   LAAL +R++  FDP+++LN GRM
Sbjct: 353 EPQPPALAALSQRLKQEFDPKNILNPGRM 381


>BMEII1062 [C] COG0277 FAD/FMN-containing dehydrogenases Bme Brucella
           melitensis
          Length = 344

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 82/150 (54%), Gaps = 7/150 (4%)

Query: 1   LSQTLSSFGVVDSLADDASAAIWSALRDVVPFAANGALGAWPVWRIVCPPASGGALGQAL 60
           L   L   G +D L D  S  +W  +RDV+P+A  G   A  VWR+   P  G  +    
Sbjct: 193 LQDLLGRTGTIDVLDDSQSRQLWREVRDVLPYAQAGDGRA--VWRVSMAPMQGWRMVDEF 250

Query: 61  SRATGGDVVYDWGGGLIWTAVP--PGADAQAMLVRGQVEAIGGHATLIRATEDVRRAVDV 118
            R  G D  YDW GGLIW  +   P AD    L+       GGHATLIRA E VR +VDV
Sbjct: 251 RRHAGVDAYYDWQGGLIWMRMEAEPEADVLRKLI---ARHGGGHATLIRAPERVRGSVDV 307

Query: 119 FQPQAAGLAALGERVRASFDPRSVLNRGRM 148
           FQPQ A LAAL  R++  FDP ++LN GRM
Sbjct: 308 FQPQPAALAALSARLKQQFDPENILNPGRM 337


>AGc1191 [C] COG0277 FAD/FMN-containing dehydrogenases Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 449

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 6/136 (4%)

Query: 14  LADDASAAIWSALRDVVPFAANGALGAWPVWRIVCPPASGGALGQALSRATGGDVVYDWG 73
           L  + S  +W  +RDV P+A  GA    P+W++   PA+G  L  AL    G D  YDW 
Sbjct: 315 LEGEDSRLLWRQVRDVAPYAGQGA---KPLWKVSVAPAAGHRLVAALRMEAGIDAFYDWQ 371

Query: 74  GGLIWTAVPPGADAQAMLVRGQVEAIGG-HATLIRATEDVRRAVDVFQPQAAGLAALGER 132
           GGL+W  +   AD +A L+RG + A+GG HATL+RA++ VR +V  F+P+ A  A L  R
Sbjct: 372 GGLVWMQME--ADPEADLLRGAIRALGGGHATLLRASDAVRASVAAFEPRPAAEALLSAR 429

Query: 133 VRASFDPRSVLNRGRM 148
           +R   DP  + N G+M
Sbjct: 430 IREKLDPAGIFNPGKM 445


>RSc2667 [C] COG0277 FAD/FMN-containing dehydrogenases Rso Ralstonia
           solanacearum
          Length = 372

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 69/135 (51%), Gaps = 10/135 (7%)

Query: 16  DDASA-AIWSALRDVVP-FAANGALGAWPVWRIVCPPASGGALGQALSRATGGDVVYDWG 73
           D+A A A+W  LR+    F A    G+ P+WRI  PPA+      AL  A   D + +WG
Sbjct: 242 DEAEALALWRDLREQSHAFFAPAVQGSLPLWRIALPPATPPL---ALGPAAADDQLIEWG 298

Query: 74  GGLIWTAVPPGADAQAMLVRGQVEAIGGHATLIRATEDVRRAVDVFQPQAAGLAALGERV 133
           GG  W        A A  +R  V   GGHATL R  +   R   VF P AA L A+ +R+
Sbjct: 299 GGQRWWIDTGNTPADA--IRDAVRRAGGHATLFRNGD---RDSAVFTPVAAPLMAVHKRL 353

Query: 134 RASFDPRSVLNRGRM 148
           + SFDP  + N GR+
Sbjct: 354 KDSFDPHGIFNPGRL 368