BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0193.0094.p         (149 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ...    75   3e-14
SP0753 [E] COG0410 ABC-type branched-chain amino acid transport ...    69   4e-12
BMEI0261 [E] COG0410 ABC-type branched-chain amino acid transpor...    67   1e-11
RSc2437 [E] COG0410 ABC-type branched-chain amino acid transport...    67   1e-11
mll3974 Non COG                                                        64   9e-11

>TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Tma Thermotoga maritima
          Length = 239

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)

Query: 70  PAHIRARAGIVLVPEGRQVFPELTVRQNLRLGAFARKGLD-LDAEIDAMFARFPRLKERI 128
           PAH+  R GI LVPEGR++FPELTV +NL +GA+ RK  + +  +++ +F+ FPRLKER+
Sbjct: 73  PAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERL 132

Query: 129 NHRAGLLSAASSRC 142
               G LS    + 
Sbjct: 133 KQLGGTLSGGEQQM 146


>SP0753 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Spn Streptococcus pneumoniae TIGR4
          Length = 236

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 66  FDKMPAHIRARAGIVLVPEGRQVFPELTVRQNLRLGAFARKGLDLD-AEIDAMFARFPRL 124
             KMPA     +G+  VPEGR VFP LTV +NL +GAF +K  + + A +  +F+RFPRL
Sbjct: 67  IQKMPAQKIVASGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVFSRFPRL 126

Query: 125 KERINHRAGLLSAASSRC 142
           +ER N  A  LS    + 
Sbjct: 127 EERKNQDAATLSGGEQQM 144


>BMEI0261 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Bme Brucella melitensis
          Length = 249

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 43/73 (58%)

Query: 69  MPAHIRARAGIVLVPEGRQVFPELTVRQNLRLGAFARKGLDLDAEIDAMFARFPRLKERI 128
           MP H  A+  I   PEGR++FP +TV +NL++GA        D ++  MF  FPRLKERI
Sbjct: 80  MPPHEIAKLRIAQSPEGRRIFPRMTVLENLQMGASLDNQQYFDEDVKLMFDLFPRLKERI 139

Query: 129 NHRAGLLSAASSR 141
           N R G LS    +
Sbjct: 140 NQRGGTLSGGEQQ 152


>RSc2437 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Rso Ralstonia solanacearum
          Length = 244

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 70  PAHIRARAGIVLVPEGRQVFPELTVRQNLRLGAFARKGLD-LDAEIDAMFARFPRLKERI 128
           P++   + G+ +VPEGR VF  +T+ +NL++GAF R     + A+ID MF  FPRLKER 
Sbjct: 79  PSYNLLKQGLAMVPEGRGVFARMTIVENLQMGAFTRNDESGIKADIDRMFGIFPRLKERA 138

Query: 129 NHRAGLLSAASSRC 142
           N  AG +S    + 
Sbjct: 139 NQLAGTMSGGEQQM 152


>mll3974 Non COG
          Length = 242

 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%)

Query: 68  KMPAHIRARAGIVLVPEGRQVFPELTVRQNLRLGAFARKGLDLDAEIDAMFARFPRLKER 127
           ++P H  AR  I   PEGR++FP +TV +NL++GA        D +++ +F  FPRLKER
Sbjct: 72  QLPTHEIARMRIAQSPEGRRIFPRMTVMENLQMGASLDNLKHYDEDVEKVFTLFPRLKER 131

Query: 128 INHRAGLLSAASSRC 142
           I  R G LS    + 
Sbjct: 132 IAQRGGTLSGGEQQM 146