BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0071.p (281 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc02345 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tran... 190 3e-48 SMb20571 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tran... 185 1e-46 Cgl1193 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 142 6e-34 PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 138 1e-32 AGl1398 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 135 7e-32 >SMc02345 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Sme Sinorhizobium meliloti Length = 287 Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 114/271 (42%), Positives = 164/271 (60%), Gaps = 7/271 (2%) Query: 8 RRDEHAPAARSPLVSAVRAATRGLAAFGRRSLLLIALLAIWEAAPRLGLIDAVFLPPFSD 67 RR P + L T GL A +IA +WE APR G I+A+F PP S Sbjct: 18 RRKRALPKTPTALGRTFTTITLGLPA-------VIAFALLWEIAPRAGWINALFFPPLSQ 70 Query: 68 VNAAGWQLAQTGELYDDASASLLRALSGFLVSVVLFVPLGLAVGWHTRLGDLLNQFIEVC 127 V A W++ +G+L D SL RA GFL++ V VPLG +G ++ + ++ Sbjct: 71 VLAVLWEMIVSGQLADHIGISLERAAIGFLLACVTAVPLGFLMGRYSLFEKASDFLVQTL 130 Query: 128 RNTAPLALLPVFILLLGIGELSKVTMVVYSCAWPLLLNTIAAVKQVDPLLIKSARTMGAT 187 RNT+ ALLPVFI++LGIGE SK+ + Y+ + LL+NTI VK VDPLL+K+AR+MG + Sbjct: 131 RNTSQFALLPVFIIVLGIGEASKIAITFYAAVFFLLINTIVGVKSVDPLLVKAARSMGTS 190 Query: 188 PQQLFRKVILPAALPTIFVGIRLASASAMLVLVASEMVGAKAGLGYLIINSQYSFLIPQM 247 LF+KVI P+A+P+I G RL +++ ++A+EM+ A++G+GYLI +S +M Sbjct: 191 DWDLFKKVIFPSAIPSIVAGARLGVKTSLFSVIAAEMLAAQSGIGYLIQHSSLMLETDRM 250 Query: 248 YFGIIGITVIGLAFNAVLEALERRLMRWKAQ 278 Y GI+ +T+IGL N +L A ERR RW+ Sbjct: 251 YAGILTLTIIGLLLNYLLVAGERRATRWRGS 281 >SMb20571 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Sme Sinorhizobium meliloti Length = 281 Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 107/240 (44%), Positives = 160/240 (66%) Query: 37 RSLLLIALLAIWEAAPRLGLIDAVFLPPFSDVNAAGWQLAQTGELYDDASASLLRALSGF 96 R LLIA LA+W+AA G I+ P + +A W G L DD + SL R+ + F Sbjct: 38 RYGLLIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALLDDIAISLQRSGTAF 97 Query: 97 LVSVVLFVPLGLAVGWHTRLGDLLNQFIEVCRNTAPLALLPVFILLLGIGELSKVTMVVY 156 + +VVL +PLGL +G + + L+ +++ R T+ LAL PVFILLLG+GE SKV ++ + Sbjct: 98 VGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLGEASKVFVIFW 157 Query: 157 SCAWPLLLNTIAAVKQVDPLLIKSARTMGATPQQLFRKVILPAALPTIFVGIRLASASAM 216 + +PLLL+TI+ VK+VD LI+ AR GA+ +FR+V+LP A+P+IFVG+RL++ +A+ Sbjct: 158 ATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIFVGLRLSATTAL 217 Query: 217 LVLVASEMVGAKAGLGYLIINSQYSFLIPQMYFGIIGITVIGLAFNAVLEALERRLMRWK 276 L+L+ASEM+GA G+G+ ++N+QY+F IP M+ I + +GL N L +RRL RW Sbjct: 218 LLLIASEMIGANKGIGFQVMNAQYNFQIPLMFAAIFILAGLGLVSNYALVFAQRRLCRWS 277 >Cgl1193 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Cgl Corynebacterium glutamicum Length = 256 Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 133/236 (56%), Gaps = 2/236 (0%) Query: 42 IALLAIWEAAPRLGLIDAVFLPPFSDVNAAGWQLAQTGELYDDASASLLRALSGFLVSVV 101 +A+L W+ LG I LP + + AA W++A G L D S R L GF + V Sbjct: 20 LAVLVFWQLGSSLGAIPERILPAPTTILAASWEVATNGTLLDALLVSSQRVLLGFALGAV 79 Query: 102 LFVPLGLAVGWHTRLGDL-LNQFIEVCRNTAPLALLPVFILLLGIGELSKVTMVVYSCAW 160 L + LG+ G +R D ++ I+ R L L+P+FI+ GIGEL KV ++ + Sbjct: 80 LGISLGVLTG-MSRFADTAVDPLIQAARALPHLGLVPLFIIWFGIGELPKVLIISLGVLY 138 Query: 161 PLLLNTIAAVKQVDPLLIKSARTMGATPQQLFRKVILPAALPTIFVGIRLASASAMLVLV 220 PL LNT + +Q+DP L+++ MG Q R +I+P+A P +FVG+R ASA+A L L+ Sbjct: 139 PLYLNTASGFRQIDPKLLEAGHVMGFGFFQRLRTIIIPSAAPQLFVGLRQASAAAWLSLI 198 Query: 221 ASEMVGAKAGLGYLIINSQYSFLIPQMYFGIIGITVIGLAFNAVLEALERRLMRWK 276 +E V A+ GLG+LI N++ + + FG+I +GL A++ A ER R++ Sbjct: 199 VAEQVNAREGLGFLINNARDFYRTDLVIFGLIVYASLGLLSEALIRAWERHTFRYR 254 >PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 262 Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/238 (35%), Positives = 131/238 (55%), Gaps = 6/238 (2%) Query: 42 IALLAIWEAAPRLGLIDAVFLPPFSDVNAAGWQLAQTGELYDDASASLLRALSGFLVSVV 101 + LLA+W+AA G + + LP S V AGW L ++GE++ + S RA GFL+ Sbjct: 18 LVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRAAIGFLIGGA 77 Query: 102 LFVPLGLAVG---WHTRLGDLLNQFIEVCRNTAPLALLPVFILLLGIGELSKVTMVVYSC 158 + + LG G W R L+ +++ RN LAL+P+ IL GI E +K+ +V Sbjct: 78 IGLVLGFVTGLSKWGERF---LDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGT 134 Query: 159 AWPLLLNTIAAVKQVDPLLIKSARTMGATPQQLFRKVILPAALPTIFVGIRLASASAMLV 218 +P+ LNT ++ +DP L++ AR+ G + LFR+VILP ALP+I VG+R A L Sbjct: 135 LFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGVRFALGFMWLT 194 Query: 219 LVASEMVGAKAGLGYLIINSQYSFLIPQMYFGIIGITVIGLAFNAVLEALERRLMRWK 276 L+ +E + A +G+GYL +N++ + I+ V+G + LER +RW Sbjct: 195 LIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERVWLRWH 252 >AGl1398 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 260 Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 129/233 (55%) Query: 44 LLAIWEAAPRLGLIDAVFLPPFSDVNAAGWQLAQTGELYDDASASLLRALSGFLVSVVLF 103 +LA WE A R+GLI A LP S V A W+L +GEL + S RAL+GF + + Sbjct: 22 ILAGWEVAARVGLISANVLPAPSAVAEAFWRLLLSGELIANIGVSSARALAGFAIGGSIG 81 Query: 104 VPLGLAVGWHTRLGDLLNQFIEVCRNTAPLALLPVFILLLGIGELSKVTMVVYSCAWPLL 163 GLA G + +++ RN LAL+P+ IL GI E +K+ +V +P+ Sbjct: 82 FIFGLANGLSRFSRSFTDTTLQMIRNIPHLALIPLVILWFGIDEEAKLFLVALGVFFPIY 141 Query: 164 LNTIAAVKQVDPLLIKSARTMGATPQQLFRKVILPAALPTIFVGIRLASASAMLVLVASE 223 +NT+ ++ VDP L++ RT G +P LFR+VILP ALP+IF G+R A L L+ +E Sbjct: 142 INTLLGIQGVDPQLVEMGRTYGMSPFTLFRRVILPGALPSIFTGLRYALGIMWLTLIVAE 201 Query: 224 MVGAKAGLGYLIINSQYSFLIPQMYFGIIGITVIGLAFNAVLEALERRLMRWK 276 + + +GLGY+ + ++ LI + I+ ++G ++ LE ++W Sbjct: 202 TISSSSGLGYMAMQAREFLLIDVVVLSILIYALLGKLADSFARFLESIFLQWH 254