BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0060.p (364 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3070 [R] COG0714 MoxR-like ATPases Pae Pseudomonas aeruginosa 362 1e-99 VCA0175 [R] COG0714 MoxR-like ATPases Vch Vibrio cholerae 340 4e-93 PH0776 [R] COG0714 MoxR-like ATPases Pho Pyrococcus horikoshii 282 7e-76 PAB0848 [R] COG0714 MoxR-like ATPases Pab Pyrococcus abyssi 281 1e-75 BB0176 Non COG 276 4e-74 >PA3070 [R] COG0714 MoxR-like ATPases Pae Pseudomonas aeruginosa Length = 326 Score = 362 bits (928), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 179/320 (55%), Positives = 237/320 (74%), Gaps = 7/320 (2%) Query: 42 KSSAARDAVLDLKARIGKSVLGQDHLVESMLIGLLANGNLLIESLPGLAKTRAVKTLAKN 101 +S+ + A+ LK + +LGQ+ LV+ +LI LLA+G+LL+E PGLAKT+A+K LA+ Sbjct: 6 ESTQHKSALQGLKGYLSSQILGQEKLVDRLLIALLADGHLLVEGAPGLAKTKAIKDLAEG 65 Query: 102 LAADLSRVQFTPDLLPSDVTGAEIYLQTEKGGQFQFQKGPIFANLVLADEINRAPAKVQS 161 L A+ R+QFTPDLLP+D+TG EIY + G F FQ+GPIF +LVLADEINRAPAKVQS Sbjct: 66 LEAEFHRIQFTPDLLPADITGTEIY--RPETGTFVFQQGPIFHHLVLADEINRAPAKVQS 123 Query: 162 ALLEAMEERQVTVAGKTYKMPDLFMVLATENPIEQEGTYPLPEAQLDRFLMHVVITYPDE 221 ALLEAM ERQV+V TY +P LF+V+AT+NPIEQEGTYPLPEAQLDRFLMHV I YP+ Sbjct: 124 ALLEAMAERQVSVGRSTYDLPQLFLVMATQNPIEQEGTYPLPEAQLDRFLMHVKIGYPEA 183 Query: 222 ATEGEIIKLNRAENARKPEAGAAEPP-PVPQQAVLDARGELDGIFVSDLAQKYIVDLIYA 280 + E I++ R E G A P V Q+ + AR E+ G++++D ++Y+V LI A Sbjct: 184 SVERRILQQARGEALN----GEARPERRVTQETIFAARQEILGLYMADAVEEYLVQLIMA 239 Query: 281 TRFPGRYGEPLSKWIQIGASPRGSLAIDRCARARAWLDGQDFVTPDHIRAVIHDCLRHRL 340 TR P ++ L++WI GASPRGS+A+DRCARA AWL G+DFV+P+ I+AV+ D LRHRL Sbjct: 240 TRTPAKHDAELAEWISYGASPRGSIALDRCARAHAWLGGRDFVSPEDIQAVLFDVLRHRL 299 Query: 341 ILSYEAVSQGISPDQVIDKI 360 IL++EA + GI D+V+ +I Sbjct: 300 ILTFEAEAAGIDQDRVVQRI 319 >VCA0175 [R] COG0714 MoxR-like ATPases Vch Vibrio cholerae Length = 318 Score = 340 bits (871), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 158/308 (51%), Positives = 224/308 (72%), Gaps = 5/308 (1%) Query: 53 LKARIGKSVLGQDHLVESMLIGLLANGNLLIESLPGLAKTRAVKTLAKNLAADLSRVQFT 112 L+ + + V+GQ + +LI LLA+G++L+E PGLAKTRAVK+LA + D R+QFT Sbjct: 9 LQHYLNQQVIGQTDFINQLLIALLADGHILVEGPPGLAKTRAVKSLADCIEGDFHRIQFT 68 Query: 113 PDLLPSDVTGAEIYLQTEKGGQFQFQKGPIFANLVLADEINRAPAKVQSALLEAMEERQV 172 PDLLP+D+TG+++Y + G+F FQ GPIF LVLADEINRAPAKVQ+A+LEAM E+Q+ Sbjct: 69 PDLLPADLTGSDVY--RPETGEFVFQSGPIFNALVLADEINRAPAKVQAAMLEAMAEKQI 126 Query: 173 TVAGKTYKMPDLFMVLATENPIEQEGTYPLPEAQLDRFLMHVVITYPDEATEGEIIKLNR 232 + KTY++P+LF+V+AT+NPIEQEGTYPLPEAQLDRFL+H+ + YP+ E I++LNR Sbjct: 127 SAGRKTYRLPELFLVMATQNPIEQEGTYPLPEAQLDRFLLHLEVNYPNAEDELAILRLNR 186 Query: 233 AENARKPEAGAAEPPPVPQQAVLDARGELDGIFVSDLAQKYIVDLIYATRFPGRYGEPLS 292 E + A P + QQ V AR E+ + +++ + Y+V L+ ATR P Y L+ Sbjct: 187 GEAKGQ---QAINKPLLTQQQVFSARQEVLNVHMAEAIENYLVRLVMATRHPANYDAKLA 243 Query: 293 KWIQIGASPRGSLAIDRCARARAWLDGQDFVTPDHIRAVIHDCLRHRLILSYEAVSQGIS 352 +W+ +G SPR ++A+DRCARA AWL G+DFVTPD ++ + LRHRL+LSY+A ++GI Sbjct: 244 QWLTMGVSPRATIALDRCARAHAWLQGRDFVTPDDVQVMAFSVLRHRLLLSYQAQAEGIH 303 Query: 353 PDQVIDKI 360 P+++I + Sbjct: 304 PNKIISHL 311 >PH0776 [R] COG0714 MoxR-like ATPases Pho Pyrococcus horikoshii Length = 314 Score = 282 bits (722), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 151/306 (49%), Positives = 212/306 (69%), Gaps = 13/306 (4%) Query: 57 IGKSVLGQDHLVESMLIGLLANGNLLIESLPGLAKTRAVKTLAKNLAADLSRVQFTPDLL 116 + K+++G+D++++ +L +LA+G++LIE LPGLAKT K+ AK L + RVQFTPDLL Sbjct: 14 VKKAIVGKDNVLKLVLATILADGHILIEDLPGLAKTLMAKSFAKALGLEFKRVQFTPDLL 73 Query: 117 PSDVTGAEIYLQTEKGGQFQFQKGPIFANLVLADEINRAPAKVQSALLEAMEERQVTVAG 176 PSD+ G ++ Q K +F+F+KGP+F N++LADEINRAP K QSALLEAM+ERQVT+ G Sbjct: 74 PSDILGVNVFNQ--KTLEFEFKKGPVFTNILLADEINRAPPKTQSALLEAMQERQVTIEG 131 Query: 177 KTYKMPDLFMVLATENPIEQEGTYPLPEAQLDRFLMHVVITYPDEATEGEIIKLNRAENA 236 TYK+P F+V+AT+NPIEQEGTYPLPEAQLDRFL+ + + YP + E EI++ R E Sbjct: 132 VTYKLPKPFIVIATQNPIEQEGTYPLPEAQLDRFLVRLRMGYPSKDEEKEILR-RRIE-- 188 Query: 237 RKPEAGAAEPPPVPQQAVLDARGELDGIFVSDLAQKYIVDLIYATRFPGRYGEPLSKWIQ 296 RK + E P+ VL + E++ ++VSD +YI L++ATR R I+ Sbjct: 189 RKQDEVEIETVLSPKD-VLKMQREVEDVYVSDAIIEYITSLVWATREDKRD-------IE 240 Query: 297 IGASPRGSLAIDRCARARAWLDGQDFVTPDHIRAVIHDCLRHRLILSYEAVSQGISPDQV 356 IG SPRGSLA+ + +RA A ++G+D+V PD ++AV L HR+IL E +S + V Sbjct: 241 IGVSPRGSLALLKLSRAYAAIEGRDYVIPDDVKAVAIPALSHRIILKRELWYTRVSQESV 300 Query: 357 IDKITE 362 I+KI E Sbjct: 301 IEKILE 306 >PAB0848 [R] COG0714 MoxR-like ATPases Pab Pyrococcus abyssi Length = 314 Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 144/306 (47%), Positives = 205/306 (66%), Gaps = 13/306 (4%) Query: 57 IGKSVLGQDHLVESMLIGLLANGNLLIESLPGLAKTRAVKTLAKNLAADLSRVQFTPDLL 116 + K+++G+D++++ ML +LA+G++LIE LPGLAKT K+ AK L + RVQFTPDLL Sbjct: 14 VKKAIVGKDNVLKLMLASMLADGHILIEDLPGLAKTLMAKSFAKALGLEFRRVQFTPDLL 73 Query: 117 PSDVTGAEIYLQTEKGGQFQFQKGPIFANLVLADEINRAPAKVQSALLEAMEERQVTVAG 176 PSD+ G ++ +K +F+F+KGP+F N++LADEINRAP K QSALLEAM+ERQVT+ G Sbjct: 74 PSDILGVNVF--NQKTLEFEFKKGPVFTNILLADEINRAPPKTQSALLEAMQERQVTIEG 131 Query: 177 KTYKMPDLFMVLATENPIEQEGTYPLPEAQLDRFLMHVVITYPDEATEGEIIKLNRAENA 236 TY++P F+V+AT+NPIEQEGTYPLPEAQLDRFL+ + + YP + E EI+K Sbjct: 132 NTYQLPRPFIVIATQNPIEQEGTYPLPEAQLDRFLVRLRVGYPSKEEEKEILKRRIERKM 191 Query: 237 RKPEAGAAEPPPVPQQAVLDARGELDGIFVSDLAQKYIVDLIYATRFPGRYGEPLSKWIQ 296 E P + +L + E++ ++VSD +YI L++ATR R I+ Sbjct: 192 DDVEINTVLSP----EDILRMQREIEEVYVSDAIIEYITSLVWATREDKRE-------IE 240 Query: 297 IGASPRGSLAIDRCARARAWLDGQDFVTPDHIRAVIHDCLRHRLILSYEAVSQGISPDQV 356 +G SPRGSLA+ + +RA A ++G+D+V PD ++AV L HR+IL E I + + Sbjct: 241 VGVSPRGSLALLKLSRAYAAIEGRDYVIPDDVKAVAVPALSHRIILKRELWYMRIRQEDI 300 Query: 357 IDKITE 362 I KI E Sbjct: 301 IKKILE 306 >BB0176 Non COG Length = 337 Score = 276 bits (707), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 142/309 (45%), Positives = 206/309 (66%), Gaps = 13/309 (4%) Query: 53 LKARIGKSVLGQDHLVESMLIGLLANGNLLIESLPGLAKTRAVKTLAKNLAADLSRVQFT 112 + + VLGQ +++++L+GLL +G++L+E +PGLAKT A++T++ L + R+QFT Sbjct: 28 FRREVATRVLGQKEMIDAILMGLLTDGHVLLEGVPGLAKTLAIQTVSDVLDLEFKRIQFT 87 Query: 113 PDLLPSDVTGAEIYLQTEKGGQFQFQKGPIFANLVLADEINRAPAKVQSALLEAMEERQV 172 PDLLPSD+TG +Y G F+ +KGP+F+N++LADEINRAPAKVQSALLEAM ERQV Sbjct: 88 PDLLPSDLTGNMVY--KSATGTFKVRKGPVFSNVILADEINRAPAKVQSALLEAMGERQV 145 Query: 173 TVAGKTYKMPDLFMVLATENPIEQEGTYPLPEAQLDRFLMHVVITYPDEATEGEIIKL-- 230 T+ +T+++PD F VLAT+NPIEQEGTY LPE+QLDRFL+ V + YP E ++K+ Sbjct: 146 TLGDETHRLPDPFFVLATQNPIEQEGTYNLPESQLDRFLLKVNVHYPSVQDEVRLLKIFS 205 Query: 231 --NRAENARKPEAGAAEPPPVPQQAVLDARGELDGIFVSDLAQKYIVDLIYATRFPGRYG 288 R EN + + A ++ D + + + V D YIV LI A+R + Sbjct: 206 VDGRLENIKVAKVMNA-------YSLADIKRTVGRVKVDDKIMLYIVTLISASRERDKKT 258 Query: 289 EPLSKWIQIGASPRGSLAIDRCARARAWLDGQDFVTPDHIRAVIHDCLRHRLILSYEAVS 348 P +K+I+ GASPR SL++ +CAR A +G+ FV P+ ++AV + LRHR+ SYEA Sbjct: 259 YPFAKYIEFGASPRASLSLLKCARVNALYEGRIFVLPEDVKAVAYSVLRHRITPSYEAEV 318 Query: 349 QGISPDQVI 357 + +S D +I Sbjct: 319 EEMSIDDII 327