BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0053.p (221 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl763 [P] COG2011 ABC-type metal ion transport system, permease... 249 3e-66 SMc03158 [P] COG2011 ABC-type metal ion transport system, permea... 242 4e-64 RSc0921 [P] COG2011 ABC-type metal ion transport system, permeas... 223 2e-58 VC0906 [P] COG2011 ABC-type metal ion transport system, permease... 204 9e-53 BMEII0336 [P] COG2011 ABC-type metal ion transport system, perme... 191 2e-48 >AGl763 [P] COG2011 ABC-type metal ion transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 222 Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 157/222 (70%), Positives = 186/222 (83%), Gaps = 1/222 (0%) Query: 1 MSRELI-NLIVQATGESLFMVSVAALVATALGLPLGVFLATSRKGELFAAPSANGVLGVI 59 MS ++I NL+ + ++L MV+VA +V + +G+P+GVFLATS KGELF AP N +LG+I Sbjct: 1 MSPDMIFNLLFKGLWQTLHMVAVAGIVGSIIGVPMGVFLATSGKGELFPAPMTNRILGLI 60 Query: 60 VNAARSTPFIILVVAIIPFTRLIAGTSIGSGAAIVPLTIAATPFIARLVEAAIREVDAGL 119 VNAARSTPFIILVVAIIPFTRL+AGTSIG+ AAIVPLT+A PFIARLVEAAIREVD GL Sbjct: 61 VNAARSTPFIILVVAIIPFTRLVAGTSIGTSAAIVPLTVATVPFIARLVEAAIREVDKGL 120 Query: 120 IETASSFGASPLQIVFKVLIPEALPGVVLALTLAVVSLLGYSAMVGAVVGGGLGDLGIRY 179 IE A + GA+PLQIV KVL+ EA PG+ LALTL +VSL+GYSAMVGAV GGGLGDLGIRY Sbjct: 121 IEAARAMGATPLQIVTKVLLAEAKPGITLALTLTLVSLIGYSAMVGAVGGGGLGDLGIRY 180 Query: 180 GYQRFMPEMMLAVVVVLIALVQTVQTAGDYLARRVNRRLRHR 221 GYQRFMP++MLAVV+VLI LVQ VQ+AGD LAR ++R R Sbjct: 181 GYQRFMPDVMLAVVLVLIVLVQLVQSAGDRLARSFDKRTRKN 222 >SMc03158 [P] COG2011 ABC-type metal ion transport system, permease component Sme Sinorhizobium meliloti Length = 221 Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 149/220 (67%), Positives = 183/220 (83%) Query: 1 MSRELINLIVQATGESLFMVSVAALVATALGLPLGVFLATSRKGELFAAPSANGVLGVIV 60 MS +L+ I AT ++++MV++A LV + +GLP+G+FLATS KGELF AP+ N +G++V Sbjct: 1 MSPDLLLRIGSATLDTMYMVAIAGLVGSLIGLPIGIFLATSGKGELFPAPNVNRAVGLVV 60 Query: 61 NAARSTPFIILVVAIIPFTRLIAGTSIGSGAAIVPLTIAATPFIARLVEAAIREVDAGLI 120 NA RSTPFIILVVAIIP TRLI GTSIG+ AAIVPLTIA PF+ARLVEAAIR+VD GLI Sbjct: 61 NATRSTPFIILVVAIIPLTRLITGTSIGTKAAIVPLTIATIPFVARLVEAAIRDVDKGLI 120 Query: 121 ETASSFGASPLQIVFKVLIPEALPGVVLALTLAVVSLLGYSAMVGAVVGGGLGDLGIRYG 180 E A + GA+P+QIVFKVL+ E+ P + LALT+ +VSL+GYSAMVGAV GGGLGDLGIRYG Sbjct: 121 EAARAMGATPMQIVFKVLLAESRPALTLALTMTIVSLIGYSAMVGAVGGGGLGDLGIRYG 180 Query: 181 YQRFMPEMMLAVVVVLIALVQTVQTAGDYLARRVNRRLRH 220 YQRFMP++ML VVVVLI LVQ VQ+AGD +ARR ++R R Sbjct: 181 YQRFMPDVMLVVVVVLIVLVQLVQSAGDRMARRFDKRSRK 220 >RSc0921 [P] COG2011 ABC-type metal ion transport system, permease component Rso Ralstonia solanacearum Length = 217 Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 128/217 (58%), Positives = 166/217 (76%) Query: 1 MSRELINLIVQATGESLFMVSVAALVATALGLPLGVFLATSRKGELFAAPSANGVLGVIV 60 M +L +L + A GE+L MV V+ + G+PLGV L + G + +AP+ N + G+IV Sbjct: 1 MWSDLTDLFLPAFGETLAMVGVSGGIGALFGVPLGVLLYLTGPGGVLSAPAFNRIAGLIV 60 Query: 61 NAARSTPFIILVVAIIPFTRLIAGTSIGSGAAIVPLTIAATPFIARLVEAAIREVDAGLI 120 NA RS PFIIL+VA+IPFTRL+AG+SIG+ AA VPLT+AA PFIARLVE A+REVD GLI Sbjct: 61 NAVRSVPFIILLVAVIPFTRLLAGSSIGTAAATVPLTLAAIPFIARLVETALREVDRGLI 120 Query: 121 ETASSFGASPLQIVFKVLIPEALPGVVLALTLAVVSLLGYSAMVGAVVGGGLGDLGIRYG 180 E A S GA+ Q+V+KVL+PEA+PG++ LT+ VSL+GYSAM G + GGGLGDLGIRYG Sbjct: 121 EAAQSMGATTGQLVYKVLLPEAMPGILAGLTITFVSLVGYSAMAGTIGGGGLGDLGIRYG 180 Query: 181 YQRFMPEMMLAVVVVLIALVQTVQTAGDYLARRVNRR 217 YQR+ ++MLAVVV+LI VQ VQ+ GD+L RR++ R Sbjct: 181 YQRYESDIMLAVVVILIVFVQAVQSTGDWLVRRLSHR 217 >VC0906 [P] COG2011 ABC-type metal ion transport system, permease component Vch Vibrio cholerae Length = 225 Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 114/211 (54%), Positives = 155/211 (73%) Query: 7 NLIVQATGESLFMVSVAALVATALGLPLGVFLATSRKGELFAAPSANGVLGVIVNAARST 66 +L++ AT ++L+MV++A V ALG+PLGV L T++K L N LG +VN RS Sbjct: 15 DLLLTATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSV 74 Query: 67 PFIILVVAIIPFTRLIAGTSIGSGAAIVPLTIAATPFIARLVEAAIREVDAGLIETASSF 126 PF++L+VAIIP T+LI GT IG+ AAIVPLTI A PF+ARL+E+A+ EV GL+E A S Sbjct: 75 PFLVLMVAIIPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSM 134 Query: 127 GASPLQIVFKVLIPEALPGVVLALTLAVVSLLGYSAMVGAVVGGGLGDLGIRYGYQRFMP 186 GA+PLQI+ KVL+PEALP ++ ++T+ +V+L+ YSAM G V GGGLGD+ IRYG+ R+ Sbjct: 135 GATPLQIIRKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDI 194 Query: 187 EMMLAVVVVLIALVQTVQTAGDYLARRVNRR 217 +M VV+LI LVQ +Q+ GD L RRV+ R Sbjct: 195 TIMAVTVVMLIVLVQIIQSIGDALVRRVDHR 225 >BMEII0336 [P] COG2011 ABC-type metal ion transport system, permease component Bme Brucella melitensis Length = 230 Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/217 (49%), Positives = 156/217 (71%) Query: 1 MSRELINLIVQATGESLFMVSVAALVATALGLPLGVFLATSRKGELFAAPSANGVLGVIV 60 MS+ +++L+ ++ E++ M ++L++ +GLPL + + + +G L + N +LG I+ Sbjct: 10 MSQAMLDLLWRSFWETIIMAGFSSLISLVVGLPLALIMILTERGGLAQNLTLNTILGAII 69 Query: 61 NAARSTPFIILVVAIIPFTRLIAGTSIGSGAAIVPLTIAATPFIARLVEAAIREVDAGLI 120 N RS PFIIL+VA+IP TR I GTSIG+ A+IVPL+IAA P+ AR+ E ++REVD GLI Sbjct: 70 NGFRSVPFIILLVALIPVTRFIVGTSIGTWASIVPLSIAAIPYYARIAEVSLREVDHGLI 129 Query: 121 ETASSFGASPLQIVFKVLIPEALPGVVLALTLAVVSLLGYSAMVGAVVGGGLGDLGIRYG 180 E A S GA+ IV +VLIPEALPG++ T+ V++L+G SAM GA+ GGLGDL IRYG Sbjct: 130 EAARSMGANRWTIVREVLIPEALPGIIAGFTVTVITLIGASAMAGAIGAGGLGDLAIRYG 189 Query: 181 YQRFMPEMMLAVVVVLIALVQTVQTAGDYLARRVNRR 217 YQRF ++M+AVV++LI +V +Q GD L R+++R Sbjct: 190 YQRFETQVMIAVVIILIIMVCGIQWVGDRLVNRLDKR 226