BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0193.0035.p         (146 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr5738 [T] COG0784 FOG Mlo Mesorhizobium loti                        204   4e-53
AGc3613 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C58...   181   5e-46
MTH445 [T] COG0784 FOG Mth Methanothermobacter thermautotrophicus     102   2e-22
AGc3618 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C58...    99   4e-21
MA1269 [T] COG0784 FOG Mac Methanosarcina acetivorans str.C2A          97   9e-21

>mlr5738 [T] COG0784 FOG Mlo Mesorhizobium loti
          Length = 148

 Score =  204 bits (520), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 103/142 (72%), Positives = 123/142 (86%)

Query: 4   PVTIIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDGSAVERKGQALLI 63
           PVTI+MIEDDEGHARLIE+NIRR+GVNN+++ FTNG+ A+ YL G DGS     G+ LL+
Sbjct: 7   PVTIVMIEDDEGHARLIEKNIRRAGVNNDVVAFTNGSSALAYLLGPDGSGDASVGRHLLV 66

Query: 64  LLDLNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPVNYE 123
           LLDLNLPDMTG+DIL+++K N++LK  PVVVLTTTDDS+EI+RCY+LG NVYITKPVNYE
Sbjct: 67  LLDLNLPDMTGLDILQQIKANQHLKRIPVVVLTTTDDSREIQRCYDLGANVYITKPVNYE 126

Query: 124 SFANAIRQLGLFFSVIQVPPAA 145
            FANAIRQLGL F+VIQVP  A
Sbjct: 127 GFANAIRQLGLLFTVIQVPETA 148


>AGc3613 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 145

 Score =  181 bits (458), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 90/138 (65%), Positives = 118/138 (85%)

Query: 5   VTIIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDGSAVERKGQALLIL 64
           VTI+MIEDDEGHARLIE+N+RR+GVNNEI+PFT G +A++++ G+    +  K + LL+L
Sbjct: 8   VTIVMIEDDEGHARLIEKNVRRAGVNNEIVPFTLGAKALDFILGESRDGLVSKDRYLLVL 67

Query: 65  LDLNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPVNYES 124
           LDLNLPDM+G++IL+++K N+Y +  PVVVLTTTDD  EI++CY+LG NVYITKPV+YE 
Sbjct: 68  LDLNLPDMSGLNILEQIKSNEYTRRLPVVVLTTTDDETEIQKCYDLGANVYITKPVDYEG 127

Query: 125 FANAIRQLGLFFSVIQVP 142
           FANAI+ LGLFFSVIQ+P
Sbjct: 128 FANAIKNLGLFFSVIQIP 145


>MTH445 [T] COG0784 FOG Mth Methanothermobacter thermautotrophicus
          Length = 145

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 88/139 (63%), Gaps = 3/139 (2%)

Query: 7   IIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDGSAVERKGQAL--LIL 64
           I+++ED+   A L  R ++++ + N++    +G EA++Y+F   GS  +R  + L  LIL
Sbjct: 7   ILLVEDNPTDAELTIRALKKNNLANKLHWVKDGAEALDYIFAS-GSYSDRDPENLPKLIL 65

Query: 65  LDLNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPVNYES 124
           LDL +P + G+++L+ +K N      PVVVLT++ + ++I   Y+LG N Y++KPV ++ 
Sbjct: 66  LDLRMPKVDGLEVLQEIKRNDSTSKIPVVVLTSSKEDRDIVESYKLGVNSYVSKPVEFDE 125

Query: 125 FANAIRQLGLFFSVIQVPP 143
           F +A+  LG ++ +I  PP
Sbjct: 126 FISAVSTLGFYWMIINQPP 144


>AGc3618 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 156

 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 84/139 (60%)

Query: 7   IIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDGSAVERKGQALLILLD 66
           I+++ED+     L    + +  + NE++   +GTEA++YL           G   ++LLD
Sbjct: 12  ILLVEDNPRDLELTLTALEKCQLANEVVVARDGTEALDYLNVTGSHHNRPGGDPAVVLLD 71

Query: 67  LNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPVNYESFA 126
           L LP + G+++L+ VK + +L+  PVV+LT++ + Q++ + YELG N ++ KPV +  F 
Sbjct: 72  LKLPKVDGLEVLQTVKGSDHLRHIPVVMLTSSREEQDLVKSYELGVNAFVVKPVEFNQFF 131

Query: 127 NAIRQLGLFFSVIQVPPAA 145
            AI+ LG+F++++  PP  
Sbjct: 132 KAIQDLGVFWALLNEPPPG 150


>MA1269 [T] COG0784 FOG Mac Methanosarcina acetivorans str.C2A
          Length = 146

 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 85/135 (62%), Gaps = 6/135 (4%)

Query: 4   PVTIIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDG--SAVERKGQAL 61
           PV I+++ED++G   LIE     S V N++    +G EAV++L  ++G  S V R G   
Sbjct: 9   PVDILLVEDNKGDVGLIEEVFESSKVRNKLYVVEDGEEAVHFLL-REGKFSDVPRPG--- 64

Query: 62  LILLDLNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPVN 121
           +ILLDLNLP   G ++L+ +KE+  LK+ PVVVLTT+   ++I   Y+L  N Y+TKPV+
Sbjct: 65  IILLDLNLPKKDGREVLEEIKEDDDLKNIPVVVLTTSRAEEDILESYKLHANAYVTKPVD 124

Query: 122 YESFANAIRQLGLFF 136
           ++ F   I+ +  F+
Sbjct: 125 FDQFIKVIKSIENFW 139