BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0033.p (224 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc3610_2 [T] COG3920 Signal transduction histidine kinase Atu A... 157 2e-38 MTH468_3 [T] COG3920 Signal transduction histidine kinase Mth Me... 149 6e-36 MTH446_3 [T] COG3920 Signal transduction histidine kinase Mth Me... 144 2e-34 mlr5739_2 [T] COG3920 Signal transduction histidine kinase Mlo M... 132 6e-31 MTH985 [T] COG3920 Signal transduction histidine kinase Mth Meth... 131 1e-30 >AGc3610_2 [T] COG3920 Signal transduction histidine kinase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 220 Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 127/209 (60%), Gaps = 5/209 (2%) Query: 6 DRYAALAAER-EVLLREVNHRVGNSLQIIASLLHLQANSATQQDVKAALTNAMGRVAAVA 64 DR A E E++++E+NHRV NSL ++++++ LQ N+ Q+ + AL R++A+A Sbjct: 9 DRLLVKAKEHAEMMVKEMNHRVANSLSLVSAMIRLQINTVKSQEAETALLETQSRISAIA 68 Query: 65 QVHRRLYTSHDFKTVMLNQYLEALLEDLRRSAEGNKMSRLTLKADPIEID--PDRAVAIG 122 VHR LY + + V L+ YL +++ DL ++ G+ S +T++ EID D AVA+G Sbjct: 69 GVHRSLYNTANVGLVSLSSYLTSIISDLFQAVPGS--SSVTVETSLCEIDLKADHAVALG 126 Query: 123 IIVNELVMNAVKYAYPDGAGPIHVELKPQGDDLQLAISDDGVGFSDKADPRGTGMGQRIV 182 +I+ EL+ NA+KYAYPD G + V L + L + DDGVG ++ PRGTG+G +++ Sbjct: 127 VIITELLTNALKYAYPDQTGVVRVNLSEENGQFVLVVEDDGVGVQPESAPRGTGLGTKLI 186 Query: 183 SAMAAKLDASVERDPGHKGTRFVVRFARV 211 AMA + A VE+ H R RFA + Sbjct: 187 MAMAQNIGARVEQTHTHPELRQGTRFAMI 215 >MTH468_3 [T] COG3920 Signal transduction histidine kinase Mth Methanothermobacter thermautotrophicus Length = 244 Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 124/197 (62%), Gaps = 4/197 (2%) Query: 13 AEREVLLREVNHRVGNSLQIIASLLHLQANSATQQDVKAALTNAMGRVAAVAQVHRRLYT 72 +E+E+LLREV+HRV N+LQII+SLL+LQ+ ++V+ L + GR+ +A +H LY Sbjct: 49 SEKELLLREVHHRVKNNLQIISSLLNLQSLGTEGKEVRDVLMESQGRIKVMAMIHEHLYR 108 Query: 73 SHDFKTVMLNQYLEALLEDLRRSAEGNKMSRLTLKADPIEIDPDRAVAIGIIVNELVMNA 132 S ++ Y+E L+ED+ S G+ + R ++ D I+ D D A+ +G+I+NELV N+ Sbjct: 109 SESLASINFRDYVERLVEDIIIS-HGSSI-RKVIEVDDIKPDIDTAIPLGLIINELVTNS 166 Query: 133 VKYAYPDGAGPIHVELKPQGDDLQLAISDDGVGFSDKADPRGT-GMGQRIVSAMAAKLDA 191 VKYA+PDG G + V ++ DD+ L ++DDGVG + +P T +G +VS + +LD Sbjct: 167 VKYAFPDGTGSVTVRIRSHDDDVSLVVADDGVGLPEDIEPENTDTLGLSLVSILTEQLDG 226 Query: 192 SVERDPGHKGTRFVVRF 208 ++ H GT F + F Sbjct: 227 TLTIRRDH-GTEFRISF 242 >MTH446_3 [T] COG3920 Signal transduction histidine kinase Mth Methanothermobacter thermautotrophicus Length = 263 Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 127/201 (63%), Gaps = 7/201 (3%) Query: 14 EREVLLREVNHRVGNSLQIIASLLHLQANSATQQDVKAALTNAMGRVAAVAQVHRRLYTS 73 E+E+LLREV+HRV N+LQII++LL LQA++ + ++ ++ R+ A++ +H +LY S Sbjct: 61 EKELLLREVHHRVKNNLQIISTLLMLQASTTGDKRLRDLYRDSQHRIDAISLIHEKLYES 120 Query: 74 HDFKTVMLNQYLEALLEDLRRS--AEGNKMSRLTLKADPIEIDPDRAVAIGIIVNELVMN 131 D V L Y++ LL DL S A+ N + + +K D + ++ + A+ G+I+NELV N Sbjct: 121 RDLSRVNLRDYIKTLLSDLLDSYGADSNGID-VRVKVDDVRLNIETAIPCGLIINELVSN 179 Query: 132 AVKYAYPDGAGPIHVELKPQGDDLQLAISDDGVGFSDKADPRGTG-MGQRIVSAMAAKLD 190 ++KYA+PDG G I VE+ G+ ++ +SD+GVG + D G+G +G RIV + ++D Sbjct: 180 SLKYAFPDGKGEITVEVHSTGEGYEMTVSDNGVGLPEDLDLEGSGTLGLRIVRNLVEQID 239 Query: 191 ASVERDPGHKGTRFVVRFARV 211 +E + + RF ++F V Sbjct: 240 GELEIE---RPARFTIKFTEV 257 >mlr5739_2 [T] COG3920 Signal transduction histidine kinase Mlo Mesorhizobium loti Length = 253 Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 96/218 (44%), Positives = 125/218 (57%), Gaps = 24/218 (11%) Query: 1 VHASRDRYAALAAEREVLLREVNHRVGNSLQIIASLLHLQANSATQQDVKAALTNAMGRV 60 V A+RDR E+LL EVNHRV NSL +++SL++LQAN T + K AL R+ Sbjct: 48 VRAARDRA-------ELLLAEVNHRVANSLAMVSSLVNLQANVLTDKGAKDALAETQARI 100 Query: 61 AAVAQVHRRLYTSHDFKTVMLNQYLEALLEDLRRSAEG-----NKMSRLTLKADPIEIDP 115 A+A VH+RLYTS V L+ YL LLE+L S G N +S L P+ + Sbjct: 101 FAIASVHKRLYTSGSVGIVELDGYLGGLLENLGGSMRGQGHGANLISDLA----PLTLGI 156 Query: 116 DRAVAIGIIVNELVMNAVKYAYPDGAGPIHVELKPQGDD-LQLAISDDGVGFSDKADPRG 174 D + +G+IV ELV NA KYAYPD +G + V L+ G L + DDGVG + +G Sbjct: 157 DATINLGVIVTELVTNAFKYAYPDKSGDVRVLLREDGPGRALLTVEDDGVGNAGNV-IKG 215 Query: 175 TGMGQRIVSAMAAKLDASV---ERDPGHKGTRFVVRFA 209 TG+G RI+ AMA +DA V RDP GT V+ FA Sbjct: 216 TGLGTRIIKAMARSIDADVAYQARDP---GTAVVLSFA 250 >MTH985 [T] COG3920 Signal transduction histidine kinase Mth Methanothermobacter thermautotrophicus Length = 365 Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 125/222 (56%), Gaps = 20/222 (9%) Query: 6 DRYAALAA------------------EREVLLREVNHRVGNSLQIIASLLHLQANSATQQ 47 DRYA L A E EVLL E++HRV N+LQII+SLL LQ++ Sbjct: 134 DRYAVLVARDISERLRMESELMKSLRENEVLLSEIHHRVKNNLQIISSLLSLQSHGIDDP 193 Query: 48 DVKAALTNAMGRVAAVAQVHRRLYTSHDFKTVMLNQYLEALLEDLRRSAEGNKMSRLTLK 107 ++ L+ + R+ ++A +H +LY S DF ++ + Y LL++L+RS K L+L Sbjct: 194 SCRSLLSESQDRIRSMALIHEQLYRSGDFSSIEFSSYASRLLKNLKRSYAPGKNIELSLD 253 Query: 108 ADPIEIDPDRAVAIGIIVNELVMNAVKYAYPD-GAGPIHVELKPQGDDLQLAISDDGVGF 166 + +++ + ++ +G++++ELV NA+K+A+ +G I V+ K GD L + DDGVGF Sbjct: 254 TENLKLSLETSIPLGLMLSELVTNALKHAFKGRDSGNIIVKFKKDGDYCVLEVRDDGVGF 313 Query: 167 SDKADPRGTGMGQRIVSAMAAKLDASVERDPGHKGTRFVVRF 208 +++ T +G R+V + +LD S+ G G F +RF Sbjct: 314 NEEKIRNSTSLGFRLVEILTEQLDGSLTY-SGENGGLFRIRF 354