BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0107.p (236 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1760 [Q] COG1335 Amidases related to nicotinamidase Rso Ralst... 275 8e-74 SMc02275 [Q] COG1335 Amidases related to nicotinamidase Sme Sino... 233 4e-61 BMEI0546 [Q] COG1335 Amidases related to nicotinamidase Bme Bruc... 230 2e-60 mlr4882 [Q] COG1335 Amidases related to nicotinamidase Mlo Mesor... 223 3e-58 VCA0712 [Q] COG1335 Amidases related to nicotinamidase Vch Vibri... 192 5e-49 >RSc1760 [Q] COG1335 Amidases related to nicotinamidase Rso Ralstonia solanacearum Length = 210 Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 125/207 (60%), Positives = 157/207 (75%) Query: 29 IKPDDSSALLVIDVQNCFLPGGSLAVKDGEQVVPVINRIARSFANVVMTQDWHTPGHISF 88 + P + LLV+DVQN FLPGG+LAV DG++V+PVINR+AR+F VV+TQDWH H+SF Sbjct: 1 MHPTATDCLLVMDVQNDFLPGGALAVPDGDRVIPVINRLARAFGRVVLTQDWHPRDHVSF 60 Query: 89 ASTHSGKKPFETVDLAYGKQVLWPDHCVQGTDGASLSKDLAIPQAELIIRKGFHKDVDSY 148 A+ H G +PF T+DL YG+QVLWP HCVQ + GA+L+ L +P A+LI+RKG+H+ +DSY Sbjct: 61 AANHPGAQPFGTIDLPYGQQVLWPVHCVQHSTGAALADALDVPHAQLIVRKGYHRHIDSY 120 Query: 149 SAFTEADGKTTTGLAAYLKARNVERVFVAGLATDFCVAWTALDARKAGFETYVVEDACRG 208 SAF EAD T TGL YL+ + VF AGLATDFCVAW+ALDAR AG E V+EDACR Sbjct: 121 SAFFEADRTTPTGLLGYLRELGIRHVFCAGLATDFCVAWSALDARAAGLEVVVIEDACRA 180 Query: 209 IDTQGSLAKAWDDMAKAGVKRIQSSDI 235 ID GSLA+AW M AG+ R+QS D+ Sbjct: 181 IDLDGSLAQAWQRMTDAGIARLQSRDV 207 >SMc02275 [Q] COG1335 Amidases related to nicotinamidase Sme Sinorhizobium meliloti Length = 211 Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 112/195 (57%), Positives = 140/195 (71%) Query: 36 ALLVIDVQNCFLPGGSLAVKDGEQVVPVINRIARSFANVVMTQDWHTPGHISFASTHSGK 95 AL+VID+QN F PGG+LAV+ G+++VP +NR+ + +VV+TQDWH GH SFASTH GK Sbjct: 17 ALIVIDMQNDFCPGGALAVEGGDEIVPAVNRLIDASPHVVLTQDWHPAGHSSFASTHPGK 76 Query: 96 KPFETVDLAYGKQVLWPDHCVQGTDGASLSKDLAIPQAELIIRKGFHKDVDSYSAFTEAD 155 PF+TV + YG+Q LWP+HCVQG+ GA L AEL+IRKGF +++DSYSAF E D Sbjct: 77 APFQTVAMPYGEQTLWPEHCVQGSAGADFHPSLRWTSAELVIRKGFRREIDSYSAFFEND 136 Query: 156 GKTTTGLAAYLKARNVERVFVAGLATDFCVAWTALDARKAGFETYVVEDACRGIDTQGSL 215 +T TGLA YL+ R + V + GLATDFCVA++ALDA GF T VV ACRGID GSL Sbjct: 137 HRTPTGLAGYLRERGIRSVTLCGLATDFCVAFSALDAVAKGFSTSVVLGACRGIDLNGSL 196 Query: 216 AKAWDDMAKAGVKRI 230 A M AGV+ I Sbjct: 197 AAMTLRMRDAGVRLI 211 >BMEI0546 [Q] COG1335 Amidases related to nicotinamidase Bme Brucella melitensis Length = 251 Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 109/203 (53%), Positives = 143/203 (70%) Query: 28 AIKPDDSSALLVIDVQNCFLPGGSLAVKDGEQVVPVINRIARSFANVVMTQDWHTPGHIS 87 A P AL+VIDVQN F PGG+LAV+ G++++P++NR+ NVV+TQDWH H S Sbjct: 39 AEHPMIGHALVVIDVQNDFCPGGALAVERGDEIIPIVNRLIGESENVVVTQDWHPANHSS 98 Query: 88 FASTHSGKKPFETVDLAYGKQVLWPDHCVQGTDGASLSKDLAIPQAELIIRKGFHKDVDS 147 FAS HSG +PF+TV+++YG QVLWPDHCVQ ++GA DL +A+L++RKGF +DS Sbjct: 99 FASNHSGSRPFDTVNMSYGPQVLWPDHCVQNSEGAEFHPDLQWWRAQLVVRKGFRIGIDS 158 Query: 148 YSAFTEADGKTTTGLAAYLKARNVERVFVAGLATDFCVAWTALDARKAGFETYVVEDACR 207 YSAF E D T TGL YL+ RN+ + + GLATDFCVA +ALDA + GF+ V DACR Sbjct: 159 YSAFFENDHCTPTGLGGYLRERNIGSLTMVGLATDFCVASSALDAVQQGFQVRVRLDACR 218 Query: 208 GIDTQGSLAKAWDDMAKAGVKRI 230 GID GS+ + M +AGV+ I Sbjct: 219 GIDLNGSMNIMLEKMKQAGVELI 241 >mlr4882 [Q] COG1335 Amidases related to nicotinamidase Mlo Mesorhizobium loti Length = 204 Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 105/192 (54%), Positives = 135/192 (70%) Query: 36 ALLVIDVQNCFLPGGSLAVKDGEQVVPVINRIARSFANVVMTQDWHTPGHISFASTHSGK 95 AL+VID+QN F PGG+LAV G+++VP++N + R +VV+TQDWH GH SFAS+H G Sbjct: 5 ALVVIDLQNDFCPGGALAVTGGDEIVPLVNDMIRRTDHVVLTQDWHPAGHSSFASSHPGA 64 Query: 96 KPFETVDLAYGKQVLWPDHCVQGTDGASLSKDLAIPQAELIIRKGFHKDVDSYSAFTEAD 155 +PF +++ YG+Q LWPDHC+QG+ G+ LA +AEL+IRKGF D+DSYSAF E D Sbjct: 65 QPFTMIEMPYGQQTLWPDHCIQGSLGSDFHSGLAWTKAELVIRKGFRPDIDSYSAFFEND 124 Query: 156 GKTTTGLAAYLKARNVERVFVAGLATDFCVAWTALDARKAGFETYVVEDACRGIDTQGSL 215 T TGL YL+ R ++ V + GLATDFCV ++ALDA GF+T V DACRGID GSL Sbjct: 125 HTTPTGLGGYLRERGIDTVTLVGLATDFCVGFSALDAVSQGFKTTVRLDACRGIDLNGSL 184 Query: 216 AKAWDDMAKAGV 227 M AGV Sbjct: 185 EAMLRRMRDAGV 196 >VCA0712 [Q] COG1335 Amidases related to nicotinamidase Vch Vibrio cholerae Length = 206 Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 99/203 (48%), Positives = 128/203 (63%), Gaps = 2/203 (0%) Query: 34 SSALLVIDVQNCFLPGGSLAVKDGEQVVPVINRIARSFANVVMTQDWHTPGHISFASTHS 93 S ALL++DVQN F P G+L V DG+ VVPVIN++ F +V+ T+DWH H SFAS Sbjct: 2 SKALLLVDVQNDFSPSGALPVPDGDAVVPVINQLLPLFEHVIATKDWHPAKHASFASV-Q 60 Query: 94 GKKPFETVDLAYGKQVLWPDHCVQGTDGASLSKDLAIPQAELIIRKGFHKDVDSYSAFTE 153 GK P E +DL QV+WPDHCVQ T GA L + + I+ KG H DVDSYS F + Sbjct: 61 GKTPGEVIDLNGIPQVMWPDHCVQNTHGAEFIAGLDVQRITHIVTKGTHLDVDSYSGFFD 120 Query: 154 ADGKTTTGLAAYLKARNVERVFVAGLATDFCVAWTALDARKAGFETYVVEDACRGIDTQ- 212 TGLA YL + + V++AGLATD+CV +TALDA F+T+V++DACRG++ Sbjct: 121 NQRFHATGLAEYLSNQGISEVYIAGLATDYCVKYTALDAVSLYFKTWVIQDACRGVELNA 180 Query: 213 GSLAKAWDDMAKAGVKRIQSSDI 235 G A AW M AG + I S + Sbjct: 181 GDCATAWHAMQTAGCQLITSQQL 203