BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0100.p (385 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI1771 [H] COG0635 Coproporphyrinogen III oxidase and related ... 484 e-136 AGc568 [H] COG0635 Coproporphyrinogen III oxidase and related Fe... 480 e-135 SMc01147 [H] COG0635 Coproporphyrinogen III oxidase and related ... 478 e-135 mlr4627 [H] COG0635 Coproporphyrinogen III oxidase and related F... 471 e-132 RP175 [H] COG0635 Coproporphyrinogen III oxidase and related Fe-... 309 6e-84 >BMEI1771 [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Bme Brucella melitensis Length = 404 Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust. Identities = 243/384 (63%), Positives = 285/384 (74%), Gaps = 1/384 (0%) Query: 3 HADRE-AFGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQV 61 HAD E AFG+YVHWPFCL+KCPYCDFNSHVRH PVD+ R+ AF RE+ET R R V Sbjct: 21 HADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRTV 80 Query: 62 SSIFLGGGTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGVN 121 +SIFLGGGTPSLMQP+TVGA+LD I +W V+ D+E+TLEANPTSVEA RFRGYRAAGVN Sbjct: 81 TSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEMTLEANPTSVEADRFRGYRAAGVN 140 Query: 122 RVSLGVQALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADEL 181 RVSLG+QAL D L+ +GR+H+ EA A+ +AR F R SFDLIYARPDQT W +EL Sbjct: 141 RVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREEL 200 Query: 182 KQAISEAAEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPAY 241 K+AI AA+HLSLYQLTIEEGT F+ L AGKL TP+ A ALY+ TQ V A GLPAY Sbjct: 201 KEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPAY 260 Query: 242 EISNHARAGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATERRPEAWLLNVEER 301 EISNHA G E +HNLVYWR +YAGIGPGAHGR + VR T TE+ PE WL +VE R Sbjct: 261 EISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVERR 320 Query: 302 GHGVVSDDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQLDPHRIAMLREEGAIAVD 361 GHG++ ++ L+ + DEFL+MGLRL EGID RYA+LSG +D R+A L EG I Sbjct: 321 GHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEPM 380 Query: 362 ADGRLRVTKSGFPVLDAVVADLAA 385 +R T G VLDA+VADLAA Sbjct: 381 GGSLIRATPDGALVLDALVADLAA 404 >AGc568 [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 402 Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust. Identities = 235/378 (62%), Positives = 277/378 (73%) Query: 8 AFGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQVSSIFLG 67 FG+Y+HWPFC +KCPYCDFNSHVRH PVD++RF AF RE+E R V+SIF+G Sbjct: 25 GFGIYLHWPFCAAKCPYCDFNSHVRHRPVDQERFTAAFLREMEHMRTLSGPRVVTSIFMG 84 Query: 68 GGTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV 127 GGTPSLM PQTVGA+LD I + W V +E+T+EANP+SVEA RFRGYRAAGVNRVSLGV Sbjct: 85 GGTPSLMDPQTVGALLDGISRFWHVPDGIEITMEANPSSVEAERFRGYRAAGVNRVSLGV 144 Query: 128 QALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADELKQAISE 187 QAL D LK +GRLH +AL A+ +AR F R SFDLIYARP+QT W ELK+A+S Sbjct: 145 QALNDRDLKFLGRLHDVADALKAIRLAREIFPRMSFDLIYARPNQTVAEWDAELKEAVSY 204 Query: 188 AAEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPAYEISNHA 247 A +HLSLYQLTIEEGTPF+GLH AGKL PD + LY+ TQE+ R G+PAYE+SNHA Sbjct: 205 AVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEHSAVLYEATQEITERYGMPAYEVSNHA 264 Query: 248 RAGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATERRPEAWLLNVEERGHGVVS 307 R GAE +HNL YWR +YAGIGPGAHGRL + ATATER PE WL VE GHG+V Sbjct: 265 RPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGASKLATATERHPETWLETVEREGHGMVD 324 Query: 308 DDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQLDPHRIAMLREEGAIAVDADGRLR 367 + L +E+ADE LLMGLRL EGID R++ LSGR LDP + L + G + + RLR Sbjct: 325 QELLGVDEQADELLLMGLRLREGIDLARWSDLSGRDLDPEKEEFLLQHGFVERLGNSRLR 384 Query: 368 VTKSGFPVLDAVVADLAA 385 T SG +LDAVVADLA Sbjct: 385 CTPSGMLILDAVVADLAC 402 >SMc01147 [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Sme Sinorhizobium meliloti Length = 393 Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust. Identities = 238/378 (62%), Positives = 276/378 (73%) Query: 8 AFGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQVSSIFLG 67 FGVYVHWPFC +KCPYCDFNSHVRH PVD+ RFV AF +E+ A R V+SIF+G Sbjct: 16 GFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQPRFVAAFLKEMAAVRALSGPRTVTSIFMG 75 Query: 68 GGTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV 127 GGTPSLM P+TV A+LD I + W V +E+T+EANP+SVEATRFRGYRAAGVNRVSLGV Sbjct: 76 GGTPSLMDPRTVEAILDGIARQWHVPDGIEITMEANPSSVEATRFRGYRAAGVNRVSLGV 135 Query: 128 QALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADELKQAISE 187 QAL D LK +GRLH AL A+ +AR F R SFDLIYARP+QT W ELK+A+S Sbjct: 136 QALNDRDLKFLGRLHDVENALKAIRLAREIFPRMSFDLIYARPNQTVEEWERELKEAVSY 195 Query: 188 AAEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPAYEISNHA 247 A +HLSLYQLTIEEGTPF+GLH AGKL PD + LY+ TQE+ A G+PAYE+SNHA Sbjct: 196 AVDHLSLYQLTIEEGTPFYGLHKAGKLVVPDGEQSAVLYEATQEITADIGMPAYEVSNHA 255 Query: 248 RAGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATERRPEAWLLNVEERGHGVVS 307 R GAE +HNL YWR +YAGIGPGAHGRL I + ATATER PEAWL VEE G G+V Sbjct: 256 RPGAESRHNLTYWRYGDYAGIGPGAHGRLAIGSGKIATATERNPEAWLQRVEECGEGLVE 315 Query: 308 DDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQLDPHRIAMLREEGAIAVDADGRLR 367 + L+ E +ADE LLMGLRL EG+D R+ LSGR DP R L E G I + RLR Sbjct: 316 RELLDFEAQADELLLMGLRLREGVDLARWQTLSGRDPDPAREEFLIEHGFIERIGNSRLR 375 Query: 368 VTKSGFPVLDAVVADLAA 385 T +G +LDAVVADLA Sbjct: 376 CTPAGMLILDAVVADLAC 393 >mlr4627 [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Mlo Mesorhizobium loti Length = 392 Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust. Identities = 240/377 (63%), Positives = 272/377 (72%) Query: 8 AFGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQVSSIFLG 67 FGVY+HWPFC +KCPYCDFNSHVRH PVD++RF AF E+ T R R+V+SIFLG Sbjct: 15 GFGVYIHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFEAELATMRERTGPREVTSIFLG 74 Query: 68 GGTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV 127 GGTPSLM+P+TV VLDA+ K+W V +EVTLEANP+SVEA RFRGYRAAGVNRVSLGV Sbjct: 75 GGTPSLMKPETVARVLDAVAKNWTVPDGIEVTLEANPSSVEAERFRGYRAAGVNRVSLGV 134 Query: 128 QALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADELKQAISE 187 QAL D L+ +GRLH EAL A+ +AR F R SFDLIYARP QTP WA EL+QAI Sbjct: 135 QALNDKDLRFLGRLHNVEEALHAIGLAREIFPRLSFDLIYARPGQTPEAWAAELEQAIGH 194 Query: 188 AAEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPAYEISNHA 247 AA+HLSLYQLTIEEGTPF LHAA K PD A LY +TQE + GLPAYEISNHA Sbjct: 195 AADHLSLYQLTIEEGTPFHALHAAKKFIIPDNDHAADLYALTQETTSAHGLPAYEISNHA 254 Query: 248 RAGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATERRPEAWLLNVEERGHGVVS 307 R GAE +HNL YWR EY G+GPGAHGR G R T ER PE W VE +GHGV Sbjct: 255 RPGAESRHNLTYWRYGEYVGVGPGAHGRFVEHGRRTVTIAERMPETWANLVEAKGHGVTG 314 Query: 308 DDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQLDPHRIAMLREEGAIAVDADGRLR 367 + L E ADEFLLMGLRLAEGID RY SGR L R+++L+ EG +A + RLR Sbjct: 315 GEILTRSEEADEFLLMGLRLAEGIDLARYEAFSGRGLSSARLSVLQGEGLVAPIGNARLR 374 Query: 368 VTKSGFPVLDAVVADLA 384 T +G VLDAVVADLA Sbjct: 375 ATPAGMIVLDAVVADLA 391 >RP175 [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Rpr Rickettsia prowazekii Length = 399 Score = 309 bits (792), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 154/384 (40%), Positives = 222/384 (57%), Gaps = 16/384 (4%) Query: 9 FGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQVSSIFLGG 68 +Y+HWPFCLSKCPYCDFNSH+ + +D +++++++ +EIE + + + SIF GG Sbjct: 21 LSIYIHWPFCLSKCPYCDFNSHIV-STIDYNQWLKSYEKEIEYFKFIIQNKYIKSIFFGG 79 Query: 69 GTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGVQ 128 GTPSLMQP V +++ I + E+TLE NPTS E + + +++AG+NRVS+GVQ Sbjct: 80 GTPSLMQPLIVEVIINKINNLGIIDNKTEITLETNPTSFETEKLKAFKSAGINRVSIGVQ 139 Query: 129 ALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADELKQAISEA 188 +L + LK +GR H + +A+ + A + R SFDLIYAR QT + W ELKQA+ A Sbjct: 140 SLKEDDLKKLGRTHDSMQAIKTIEAANTIVPRVSFDLIYARNGQTLKDWEKELKQAMYLA 199 Query: 189 AEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPAYEISNHAR 248 H++LYQLTIE+GTPF+ L G L P A +Y+ T + YEISN+AR Sbjct: 200 TSHIALYQLTIEKGTPFYKLFKNGNLILPTSDEAAEMYEWTNHYLESKKYFRYEISNYAR 259 Query: 249 AGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATE--RRPEAWLLNVEERGHGVV 306 G EC HNL YW Y GIGPGAH R+ I+ A P WL V + G+ Sbjct: 260 LGHECLHNLTYWNYNSYLGIGPGAHSRI-IENSNSVLAIMMLHNPAQWLDAVSTKNVGIQ 318 Query: 307 SDDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQ-------LDPHRIAMLREEGAIA 359 + L ++E +E L+MGLRL +GI + +KL R LD + + + +G I Sbjct: 319 THSKLTNKEIIEEILMMGLRLRKGI---KISKLEQRLSTALENILDINNLQHYQNQGLIK 375 Query: 360 VDADGRLRVTKSGFPVLDAVVADL 383 +D + +T G + + +V L Sbjct: 376 LDE--HIYLTDKGLMLHNYIVPRL 397