BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0192.0097.p         (128 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEI1769 [L] COG0792 Predicted endonuclease distantly related to...   105   2e-23
AGc525 [L] COG0792 Predicted endonuclease distantly related to a...   101   5e-22
SMc00418 [L] COG0792 Predicted endonuclease distantly related to...   100   6e-22
mlr4633 [L] COG0792 Predicted endonuclease distantly related to ...   100   2e-21
CC0143 [L] COG0792 Predicted endonuclease distantly related to a...    72   3e-13

>BMEI1769 [L] COG0792 Predicted endonuclease distantly related to archaeal
           Holliday junction resolvase Bme Brucella melitensis
          Length = 126

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/123 (49%), Positives = 78/123 (63%), Gaps = 1/123 (0%)

Query: 4   TDSASPERVAAFRTGISAESRAAALLIAKGYRILARRFRTPFGEIDLVVRRRNLLAFVEV 63
           TD    +R+A FR G SAE  AA  L+ KG+RI+ARR+RT  GEIDL+ RR +L+  VEV
Sbjct: 2   TDLREKKRIAFFR-GHSAERLAAFALMLKGFRIVARRYRTRLGEIDLIARRGDLVLIVEV 60

Query: 64  KARASLDDAAYAVTPRQQLRIINAAQAWLMAHPEHAEFDLRFDAVLIAPKSLPRHLLAAF 123
           KARAS + A +AVTP+   RI  AA  WL    + A   LRFD V + P+  P+H+ A F
Sbjct: 61  KARASFEAAQFAVTPQAMRRIEAAADLWLQRQTDRARLSLRFDMVAVLPRRWPKHVPAFF 120

Query: 124 DAS 126
            A 
Sbjct: 121 TAG 123


>AGc525 [L] COG0792 Predicted endonuclease distantly related to archaeal
           Holliday junction resolvase Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 122

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 73/120 (60%)

Query: 4   TDSASPERVAAFRTGISAESRAAALLIAKGYRILARRFRTPFGEIDLVVRRRNLLAFVEV 63
            D  S +R  A R G +AE  AA  L+ KGYRILA R+RT  GEIDL+ R+++L+A +EV
Sbjct: 3   VDGQSNKRRKAERRGHAAEYWAALYLLLKGYRILAIRYRTRLGEIDLIARKKDLIAIIEV 62

Query: 64  KARASLDDAAYAVTPRQQLRIINAAQAWLMAHPEHAEFDLRFDAVLIAPKSLPRHLLAAF 123
           KARAS   A  AV    Q RI  AA  WL    +   F LRFD V + P+ LP+H + AF
Sbjct: 63  KARASGGSAVDAVGFHSQQRIRAAADLWLSRRRDAGRFSLRFDIVAVLPRRLPQHFIDAF 122


>SMc00418 [L] COG0792 Predicted endonuclease distantly related to archaeal
           Holliday junction resolvase Sme Sinorhizobium meliloti
          Length = 122

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 73/121 (60%)

Query: 3   KTDSASPERVAAFRTGISAESRAAALLIAKGYRILARRFRTPFGEIDLVVRRRNLLAFVE 62
           K +     ++ A + G  AE RAA  L+ KGYRI+A R+RT  GEID++ RR +L+A VE
Sbjct: 2   KAERPDTRKLKALKRGHIAEYRAALCLMLKGYRIVAMRYRTRLGEIDIIARRGDLVACVE 61

Query: 63  VKARASLDDAAYAVTPRQQLRIINAAQAWLMAHPEHAEFDLRFDAVLIAPKSLPRHLLAA 122
           VKAR SL+DA +AVT   Q RI  A+  WL    +     +R+D V + P   PRHL  A
Sbjct: 62  VKARVSLEDAVFAVTDTAQRRIRAASDLWLSRQGDFHRLSVRYDIVAVTPWRWPRHLPDA 121

Query: 123 F 123
           F
Sbjct: 122 F 122


>mlr4633 [L] COG0792 Predicted endonuclease distantly related to archaeal
           Holliday junction resolvase Mlo Mesorhizobium loti
          Length = 125

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 74/123 (60%), Gaps = 2/123 (1%)

Query: 1   MAKTDSASPERVAAFRTGISAESRAAALLIAKGYRILARRFRTPFGEIDLVVRRRNLLAF 60
           MA+  SAS  R  A+R G   E  AAA L+ KGYRILARR RT FGEIDL+ RR +L+ F
Sbjct: 1   MAERPSAS--RQKAYRRGHRGEWLAAAALMLKGYRILARRHRTRFGEIDLIARRGDLVVF 58

Query: 61  VEVKARASLDDAAYAVTPRQQLRIINAAQAWLMAHPEHAEFDLRFDAVLIAPKSLPRHLL 120
           VEVKAR SL +A  A+    + RI  AA  WL    ++    +RFD V + P   P H+ 
Sbjct: 59  VEVKARRSLMEAMEAIGHESERRIEAAADIWLSRQADYGRLSMRFDMVAVLPWRWPVHVE 118

Query: 121 AAF 123
            AF
Sbjct: 119 NAF 121


>CC0143 [L] COG0792 Predicted endonuclease distantly related to archaeal
           Holliday junction resolvase Ccr Caulobacter vibrioides
          Length = 125

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 65/115 (56%)

Query: 12  VAAFRTGISAESRAAALLIAKGYRILARRFRTPFGEIDLVVRRRNLLAFVEVKARASLDD 71
            AA + G  AE  AA  L+AKGYRIL  R  TP GEIDL+ +R  +LA VEVK R +++D
Sbjct: 11  TAARKVGRRAEVIAALWLMAKGYRILGFRLATPLGEIDLLAQRGKVLAVVEVKQRTTIED 70

Query: 72  AAYAVTPRQQLRIINAAQAWLMAHPEHAEFDLRFDAVLIAPKSLPRHLLAAFDAS 126
           A  AV P Q+ R+  AA           +  +R D + +AP   PRHL  A+  +
Sbjct: 71  ALDAVKPTQRERLRRAATHLAAHRAGLRDLLVRLDLIAMAPGRPPRHLPDAWGGA 125