BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0192.0088.p         (119 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC0138_2 [T] COG0784 FOG Ccr Caulobacter vibrioides                    91   5e-19
MA2013_3 [T] COG0784 FOG Mac Methanosarcina acetivorans str.C2A        88   6e-18
alr3761_6 [T] COG0784 FOG Nos Nostoc sp. PCC 7120                      85   4e-17
AGc4237_3 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C...    81   6e-16
PA1611_2 [T] COG0784 FOG Pae Pseudomonas aeruginosa                    81   7e-16

>CC0138_2 [T] COG0784 FOG Ccr Caulobacter vibrioides
          Length = 133

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 67/108 (62%), Gaps = 10/108 (9%)

Query: 1   LMRSLLTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIRAH 60
           L R+LL R G  V    +GEQA    ++A SAG  YDL+LMD++MP L GIE  + +RA 
Sbjct: 13  LARTLLEREGCIVDRVADGEQA----IAAASAGV-YDLILMDLRMPGLTGIEAARALRAK 67

Query: 61  EAAHSVRRTPILALTANTLMEDRYACFEAGMDGFLIKPLDREKLEEAL 108
             A     TPI ALTA+   EDR  C  AGMD FL+KPL +E L +AL
Sbjct: 68  GVA-----TPIAALTADAFDEDRRTCLAAGMDDFLVKPLTQEALRDAL 110


>MA2013_3 [T] COG0784 FOG Mac Methanosarcina acetivorans str.C2A
          Length = 280

 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 9/106 (8%)

Query: 1   LMRSLLTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIRAH 60
           L+  LL + GH + + T+G+ A+++      +   +D VLMDIQMP ++G+E T++IR  
Sbjct: 15  LILGLLEKKGHKLTLVTSGKDALDAL-----SRRDFDAVLMDIQMPGMDGLEATRRIR-- 67

Query: 61  EAAHSVRR--TPILALTANTLMEDRYACFEAGMDGFLIKPLDREKL 104
           + +  VRR   PI+A TA  L EDR  CFEAGM+ ++ KPL +EKL
Sbjct: 68  DPSSGVRRHNIPIIAFTARALKEDREKCFEAGMNYYISKPLKKEKL 113


>alr3761_6 [T] COG0784 FOG Nos Nostoc sp. PCC 7120
          Length = 315

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 7/105 (6%)

Query: 6   LTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIR--AHEAA 63
           L  LG+   +  NG++ ++          PYDL+LMD QMP L+G+E TK+I   A  + 
Sbjct: 186 LQSLGYTADVAANGKEVLQ-----LLKQIPYDLILMDCQMPILDGLEATKEIHRWAESSF 240

Query: 64  HSVRRTPILALTANTLMEDRYACFEAGMDGFLIKPLDREKLEEAL 108
            S RR  I+A+TAN + ED+  C +AGMD +L KP+ +E+L  AL
Sbjct: 241 ASCRRPVIIAMTANAMKEDKQMCLDAGMDDYLSKPVMKEQLATAL 285


>AGc4237_3 [T] COG0784 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 306

 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 6/110 (5%)

Query: 1   LMRSLLTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIRAH 60
           +   +L + G   +I  NG++A+++W     A     L+LMD+ MP +NG + T+ IRA 
Sbjct: 187 VFSQILQQAGLRFLIVGNGKRAVQAWEEYNPA-----LILMDVSMPVMNGHQATQAIRAA 241

Query: 61  E-AAHSVRRTPILALTANTLMEDRYACFEAGMDGFLIKPLDREKLEEALA 109
           E AA   R  P++ +TA+T   DR  C EAGMD +L KP+  E LE+ +A
Sbjct: 242 EQAAGDSRHVPVIGVTAHTQEADRERCLEAGMDDYLSKPISPESLEDKIA 291


>PA1611_2 [T] COG0784 FOG Pae Pseudomonas aeruginosa
          Length = 135

 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 8/108 (7%)

Query: 1   LMRSLLTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIRAH 60
           ++ ++L  LG+ V +  +G QA+ S     +    YD +LMD ++P L+G   T++IRA 
Sbjct: 13  VIEAMLRSLGYRVTLVADGIQAVRS-----AERQRYDAILMDCRLPVLDGYSATREIRAQ 67

Query: 61  EAAHSVRRTPILALTANTLMEDRYACFEAGMDGFLIKPLDREKLEEAL 108
           E     RR PI+ALTAN L  DR  C +AGM+ +L KP  R +L+  L
Sbjct: 68  ENG---RRVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAELQRIL 112